Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,955,112 G→T 10.7% G632G (GGC→GGA)  torZ ← trimethylamine N‑oxide reductase system III, catalytic subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,955,1120GT10.7% 327.0 / 2.2 122G632G (GGC→GGA) torZtrimethylamine N‑oxide reductase system III, catalytic subunit
Reads supporting (aligned to +/- strand):  ref base G (48/56);  new base T (14/2);  total (64/58)
Fisher's exact test for biased strand distribution p-value = 2.41e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.12e-01

Only 100 of 122 total aligned reads displayed.

GTGCAGCATCTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCTTTTCCGC  >  NC_000913/1954877‑1955344
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                        
gTGCAGCATTTTTGGGGTGAATAGGGATTGGTTCACGATCGGCGATCGCATATTTTTTACGGAGTGCCGCATAGGTAAGCTGACTGTGTAAACGGTGTGCCGGATGGGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGcc                                                                                                                                                                                                                                        <  2:959640/238‑1 (MQ=255)
 tGCAGCATCTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATACGGAGCCAGCCCGGTTGGGTGTGCCGGGCATTCCTTATAGCCAAATTTTTCCCACGTTTTTGATAAAATTTAAATTTTTcc                                                                                                                                                                                                                                        >  2:61370/1‑237 (MQ=255)
  tcaggcttttCGGGTTGAATAGTGGTTTGTTCACGATCGGGGGTCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGGGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGc                                                                                                                                                                                                                                      <  2:1037834/230‑1 (MQ=255)
  gccgcaTTTTTGGTTTGTATAGTGTTTGGTTCCCGATCGGCTATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGc                                                                                                                                                                                                                                      <  2:138638/235‑1 (MQ=255)
  gcagcaTCTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGc                                                                                                                                                                                                                                      <  2:657973/238‑1 (MQ=255)
   cagcaTCTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGGCTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCCCtt                                                                                                                                                                                                                                    >  1:351306/1‑239 (MQ=255)
         cTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGCTGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGCTGGGGGTGACGGGCCATCCTTATATCCAAATTTTTCCACCGTTTTTGAATAGACTTCAATTTTGCCCCTTgtggt                                                                                                                                                                                                                               >  2:526215/1‑234 (MQ=255)
                gttaaTAGGGATTGGTTCACGATTGGGGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGGGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAgcg                                                                                                                                                                                                                       <  2:1296650/236‑1 (MQ=255)
                gtgAATTGTGATTGGTTCACGATCGGCGATCGCATATTTTTTTCGCCGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAgc                                                                                                                                                                                                                        <  2:261760/238‑1 (MQ=255)
                 tgAATAATGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGAATGTGTAAACGGTGTGCCGGATGTTCGGTCAGAAGCTGTAAATGCTTCTCGTCGGCGGAACCTTTTCAGTCATGAGGAGCACGCCACGTTGGGGGGGGCGGGCCATCCTTATAGACACATTTTTCTCACGTTTTTGGATCGGTTTCAATTTTGCCGCTTgggcaacccaccg                                                                                                                                                                                                                       >  2:241883/1‑227 (MQ=255)
                         gATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTTTAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCCTGGCGTAcccctgtcccttttac                                                                                                                                                                                                              >  1:1184643/1‑226 (MQ=255)
                          aTTGGTTCACGAGCGGCGATTGCATATTGTTTAAGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCAc                                                                                                                                                                                                             <  1:1199446/239‑1 (MQ=255)
                           ttGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTACATTCATCAGGAGCCAGCCAGGTTGGGGGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTACATAGATTTAAATTTTGCCGCTTGGCGTACCAAGCGCATTTTTCaac                                                                                                                                                                                                            >  2:276672/1‑237 (MQ=255)
                            tGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTATCGTCGGCGGTACCTTTCCATTTATCAGGGGCCAGCCAGGTTTGGGGTGCCGGGCAATCCTTTTAACCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTACCGCTTGTCTTACCCAGCCCCTTTTTCACCg                                                                                                                                                                                                           >  2:1091450/1‑239 (MQ=255)
                             ggTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCgg                                                                                                                                                                                                          >  1:535248/1‑239 (MQ=255)
                                 cACGATCAGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAACTTTTTCCAACGTTTTTGCATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCg                                                                                                                                                                                                      >  1:271327/1‑239 (MQ=255)
                                    gtacggcggttgtcttttttttGCGGCGTTCCCCATAGTTAAGCGGACTGGTTAAACGGTGTGCCGGATGTGCGGGCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGATCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACTTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGgcg                                                                                                                                                                                                   <  2:346952/223‑1 (MQ=255)
                                    ccttggtgttCGCTTTTTTTTTTCGCTGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTCTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGgcg                                                                                                                                                                                                   <  2:535248/230‑1 (MQ=255)
                                      tCGGGGATTGGATATTTTTTACGCAGTTCCGCATAGTTAAGGTGACTATGTAAACGGTGTGACGGATGTGCAGTCAGGAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGGGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATGTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGgcg                                                                                                                                                                                                   <  2:460744/237‑1 (MQ=255)
                                        ggCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCATCCAGGTTTGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGGTTTTGAATAGCTTTCAATTTTTCCGCTTGAGGTACCCAGCGCATTTTTCCCCGTATCgcggggga                                                                                                                                                                                               >  2:599142/1‑232 (MQ=255)
                                            aTCGCATTTTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGGTTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAAt                                                                                                                                                                                            <  1:1085555/238‑1 (MQ=255)
                                            aTCGCATATTTTTTACGCAGTTCCGGATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGTGCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGTTCGGCGCGGAAAt                                                                                                                                                                                            <  1:1304386/238‑1 (MQ=255)
                                               gCATATTTTTTACGCAGTTCCGCATAGTTAAGCTTACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCAcc                                                                                                                                                                                        <  1:1150935/239‑1 (MQ=255)
                                                        ttACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGTCCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTTTAGCCAAATTTTTCCAACGTCTTTGAATAGATTTCACTTTTGCCGCTTGTCGTACCCAGCGCACTTTACACCGGATCGGCTCGGAAATCCCCATaacgacg                                                                                                                                                                               >  1:405093/1‑237 (MQ=255)
                                                          acccAGTTCCGAAAAGTAAAGCTGACTGTGGAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTTCCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGt                                                                                                                                                                             <  1:1144261/236‑1 (MQ=255)
                                                          aCGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTTACCGGATCGGCGCGGAAATCACCATaacgaacg                                                                                                                                                                              >  1:311226/1‑238 (MQ=255)
                                                           cGCAGTGCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTAGGCGGTACCTTTCCATTCATCAGGAGCCAGCCCGGTTGGGTGTGCCGGGCAATCCTATTAGCCAAATTTTTCCACCGTTTTTGACTAGATTTCAATTTTTCCGCTTTGCGTACCCAGCGCATTTTTCACCGGATCGCTGCGGcaataacaataaaaaaagc                                                                                                                                                                             >  2:897478/1‑231 (MQ=255)
                                                               gTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCCTTCATCAGGAGCCAGCCAGGTTCGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGCTTTCAATTTTGCCGCTTGGCGTACCCACCGCATTTTTCACCGGCTCGGCGCGGAAATCACCATAACGAACGTACTgt                                                                                                                                                                        >  1:816280/1‑239 (MQ=255)
                                                                ttCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGGGGAAATCACCATaaagaacggaaagtt                                                                                                                                                                       >  2:1357689/1‑232 (MQ=255)
                                                                      tatgTTAAGGTGACCGTGGTAACGGTGGGCCGGATTGTCGGTCAGAAGGTGTAACTGCTTCTCGTCGGCGGTTCCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGttct                                                                                                                                                                 <  2:255413/236‑1 (MQ=255)
                                                                        aGTTAAGCTGACTGGGTAAACGGTGGGCCGGATG‑GCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTgttcg                                                                                                                                                                     <  1:657968/232‑1 (MQ=255)
                                                                         attAAGCTGACGTTGGAAACGGGGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTtcttct                                                                                                                                                              <  1:1091450/238‑1 (MQ=255)
                                                                          ttAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCAttt                                                                                                                                                                                                                  <  1:822125/186‑1 (MQ=255)
                                                                          ttAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTACTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGGTTTTGATTAGATTTCAATTTTTAGCCTTGGCGTACCCCACGCATTTTTCACCGGACCGGCCCCGGAATCACAAAaacgaaaaacattttctttcttctg                                                                                                                                                             >  2:1306551/1‑220 (MQ=255)
                                                                           taagtttgtggtttAAACGTTGTGCCGGTTGGTCGGTCAAAAGGTGTAACTGCTTCTCGTCGGACGTCACTTTCCAATCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCg                                                                                                                                                            <  2:125954/226‑1 (MQ=255)
                                                                             aGCTGGCTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAACTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCt                                                                                                                                                          <  1:24874/239‑1 (MQ=255)
                                                                                  gcttggtAAACGGTGTGCCGGATGTGGGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGgc                                                                                                                                                     <  1:856922/234‑1 (MQ=255)
                                                                                  aCTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGGTACGCGCGGAAATCCCCATAACGAACGAACGGTTCGTTCTTTTCCCTGGGgc                                                                                                                                                     >  2:130809/1‑239 (MQ=255)
                                                                                  aCTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAAAGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCTCGGAAATCCCCATAACGACCGTACTGTTCGTTCTTCTCGATGTGgc                                                                                                                                                     >  1:755497/1‑239 (MQ=255)
                                                                                   cTGGGTAAACGGTTAGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTGAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGgc                                                                                                                                                     <  1:982641/238‑1 (MQ=255)
                                                                                    tgtgTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTTCCCCTGTgggg                                                                                                                                                    >  1:814745/1‑236 (MQ=255)
                                                                                    tgtgTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATAACCAAAACAAACATACTGTTCGTTTTTCTCCCCGTGgggc                                                                                                                                                   >  2:577106/1‑239 (MQ=255)
                                                                                    tgtgTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGGTTTTGTATAGATTTCAATTTTTCCCCTTGGCGTACCCAGCGCATTTTTAACCGGTTCGGCGCGGAAATCACCATAACCAACGAACTTTTGGttttttccgtcggggg                                                                                                                                                     >  2:247252/1‑226 (MQ=255)
                                                                                    tgtgTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATACCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTTGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAAGCACCATAAAGAACCGACTGTTCGTTCTtctcccctgggcgc                                                                                                                                                   >  2:1309689/1‑229 (MQ=255)
                                                                                      tgtAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGGGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCCCTGTGGCGCAt                                                                                                                                                 >  1:309394/1‑239 (MQ=255)
                                                                                        tAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCCTTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATCGATTTCAATTTTGCCTCTTGGCGTACCCAGCGCATTTTTAACCGGATCAGCGCGGAAATCACCATACCGACCAGCCTGTTTGGTCTTCTCACTGAgggcccgt                                                                                                                                                >  2:1352612/1‑232 (MQ=255)
                                                                                        tAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGAACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACCAACGTACTGTTCGTTCTTCTCGCTGTGGCGCCtt                                                                                                                                                >  1:1061581/1‑238 (MQ=255)
                                                                                           aCGGTGGGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGa                                                                                                                                            <  1:247252/239‑1 (MQ=255)
                                                                                                gtgCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTAACTTTCCATTCATCAGGAGCCAGCCAGGTTTGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCCTGGAACTCACCCTAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGACCAGt                                                                                                                                       >  1:1183516/1‑239 (MQ=255)
                                                                                                        tggtgggTCAGAAGCTTTAAAGTCTTCTCGTGGGCGGTTCCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTAAAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTtg                                                                                                                               <  2:909491/234‑1 (MQ=255)
                                                                                                         gtgCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGACCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTTTCCCTGTGGGGCATTTCGATCAGTTTAtttttt                                                                                                                              >  1:848371/1‑237 (MQ=255)
                                                                                                                cAGAAGCTGTAACTGCCTCTCGTCGGCGGTTCCCTTCCATTCATCAGGAGCCCGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGa                                                                                                                       <  1:599142/239‑1 (MQ=255)
                                                                                                                         tAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGCTTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCCTAAAGAACTCACTGTTCTTTCTTCTCCCGTGGGCGCTTTTCGATCAGTTTATTTTCCTGCCAGAAGGCATTaa                                                                                                              >  2:742139/1‑239 (MQ=255)
                                                                                                                          aaCTGCTTCTCGGCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTaaa                                                                                                             <  1:953230/239‑1 (MQ=255)
                                                                                                                            cTGCTTCTCGTCGGCGTTTCCTTTCCATTCACCAGGGGCCCACCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACa                                                                                                           <  2:814745/239‑1 (MQ=255)
                                                                                                                             tGCTTCCCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACAt                                                                                                          <  1:632346/239‑1 (MQ=255)
                                                                                                                               tttttcgtcgGGGGTTCCTTTCCATTCATCAGGAGCCAGCCAGGGTGGGGGGGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTg                                                                                                        <  2:494435/235‑1 (MQ=255)
                                                                                                                               cTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTTCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGGAATCACCATAACGCACGTCCTTTTCGTTCTTCTCGCTTGTGCGCATTTGGGTCAGTTTATTTTGGTCCCCAAAGACTTTAAACCTTg                                                                                                        >  2:6338/1‑239 (MQ=255)
                                                                                                                               cTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCCGAAGGCCTTAAACATTg                                                                                                        >  1:1009920/1‑239 (MQ=255)
                                                                                                                                 tctcGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGc                                                                                                      >  1:334351/1‑239 (MQ=255)
                                                                                                                                    cgtcgGCGGTTCCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATa                                                                                                   <  1:439217/239‑1 (MQ=255)
                                                                                                                                       cggcgtgtccTTTCCATTCATTGGGGGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTg                                                                                                <  2:309394/231‑1 (MQ=255)
                                                                                                                                                    ccATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCAc                                                                                   <  1:577106/239‑1 (MQ=255)
                                                                                                                                                       ttCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGACGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCCCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAAAATTGGAATAGTGaagagtagggaccggg                                                                                >  2:232011/1‑224 (MQ=255)
                                                                                                                                                       ttCATAAGGAGCCAGCCAGGTTGGGTGTTCCGGGAAATCCTTATAGCCAAATTTTTCCAACTGTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACggg                                                                                <  1:793638/239‑1 (MQ=255)
                                                                                                                                                        ttcttcggtgccagcccGGTTTGGTGTTCCGTGCAATCCTTATAGGCAAATTTGTCCAACGTTTTTGAATATATTTCAATTTGTCCGCTTGCCGTACCCAGCGGATTTTTCACCGGATCGGCGCGGAAATCACCATAACTAACGTACTGTTCGTTCTTCTCGCTATGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGTGCACGGGc                                                                               <  2:1112991/230‑1 (MQ=255)
                                                                                                                                                         caagaGGAGCCGGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCATATTTTTCCAACGTTTGTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTTTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCa                                                                              <  1:508688/235‑1 (MQ=255)
                                                                                                                                                                   cacccagTTTGGGTTTCCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGCACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAg                                                                    <  2:1061581/236‑1 (MQ=255)
                                                                                                                                                                    agccagGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGc                                                                   >  1:1355198/1‑239 (MQ=255)
                                                                                                                                                                    agccagGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGGGACGCGTTGCGCACGGGCACCTTTCTGAGc                                                                   >  1:661856/1‑239 (MQ=255)
                                                                                                                                                                    agccagGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATAACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTTCCAGAAGGCCTTAAAAATTGGCATAGTGACTCGTTGTTCACGGGCCCCTTTCTGAgt                                                                   >  1:839828/1‑238 (MQ=255)
                                                                                                                                                                          gTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGCTCCGTTTATTTTTCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGGGCACGGGCCCCTTTCCGAGCGGcata                                                             >  2:963339/1‑238 (MQ=255)
                                                                                                                                                                          gTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGTTGCCCGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGcatc                                                             >  1:97237/1‑239 (MQ=255)
                                                                                                                                                                              ggTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAg                                                         >  1:391533/1‑239 (MQ=255)
                                                                                                                                                                                 gcgCCGGGCAATCCTTATAGCCAAATTTTTCCAACGGTTTTGAATAGGTTTCAATTTTGCCGCTTGGCGTACCCCGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTGCTGAGCGGCATCATAGaa                                                       <  1:1309689/236‑1 (MQ=255)
                                                                                                                                                                                  tgCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCCTTTCGATCCGTTTCTTTTGCTCCCCGCAGGCCTTAAACATTGCCATAATGACGCGTTGAGCACGGTCACCTTTCTTGGCGCCAGCATACaaaa                                                     >  2:831967/1‑239 (MQ=255)
                                                                                                                                                                                    ccGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAGGGCATTAAACATTGGCCTAGTGCCGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAAt                                                   >  1:608386/1‑239 (MQ=255)
                                                                                                                                                                                    ccGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAATGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAAt                                                   >  2:513608/1‑239 (MQ=255)
                                                                                                                                                                                    ccGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGACGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGAATTTCGATCAGTTTCTTTTTCTGCCAGACGCCATTAAAAATTGGCATAGTGACGCTTTGCGCACGGGCACCTTTCTCAGAGGcacccataaaaaat                                                   >  2:649761/1‑227 (MQ=255)
                                                                                                                                                                                        gCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCCTAGTGACGCGTTGCGCACGGGCCCCTTTCTTGACGGCCTCATAAAAAAAttta                                                >  2:13293/1‑237 (MQ=255)
                                                                                                                                                                                          aaTCTTTATAGCCAAATTTTTCCAACGTTTTTGAGTTGATTTCAATTTTGCCGCTGGGCGTACCCAGCGCATTTTTCCCCGGAGCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGTATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCTCCTTTCTGAGCGGCATCATAGAAAAATTTCAGc                                             <  2:839828/239‑1 (MQ=255)
                                                                                                                                                                                                 ataGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTACCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTTCTGCCAGAAGGCATTAAACATTGGCCACGGTACGCTTTGGGCACGGGCACCTTTCTGGGCGGCATCATAAAAAAAattaaccacacc                                        >  2:1019401/1‑228 (MQ=255)
                                                                                                                                                                                                   aGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCAtt                                    >  1:269870/1‑239 (MQ=255)
                                                                                                                                                                                                       aaaTTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCAt                                >  2:384371/1‑239 (MQ=255)
                                                                                                                                                                                                        aaTTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGAAAATCACCATAACGACCGACCTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGCCGTTAACAATTGGCGAAGTGACGCGTTGCTCACGGGCACCTTTCTGACCGCCCTCATTGAAAAATTTCAGCCACGCCActtta                                 >  2:285446/1‑235 (MQ=255)
                                                                                                                                                                                                         aTTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGGGGCATCATAGAAAAATTTCAGCCACGCCATTTAAttt                              >  2:710976/1‑237 (MQ=255)
                                                                                                                                                                                                         aTTTTGCCAACGGTTTTGAATAGATTTCAATTTTTCCTGTTGGCGTACCCAGCGCATTTTTCACCGGACCGGCGCGGAAATCACCATAACGAACGTACTTTTCGTTCTTCTCGCTGTTGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCt                              <  1:1035071/239‑1 (MQ=255)
                                                                                                                                                                                                                cAACGTTTTTGAATTGATTTCAATTTTGCCCTGTGGCTTTCCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCCTTCGTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCtt                       <  2:97237/239‑1 (MQ=255)
                                                                                                                                                                                                                cAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCtt                       <  1:742139/239‑1 (MQ=255)
                                                                                                                                                                                                                cAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCtt                       <  1:13293/239‑1 (MQ=255)
                                                                                                                                                                                                                  acttttttGAATAGATTTCATTTTTGCCTTTTGGCGTTCCCGGCGCTTTTTTCACCGGTTAGGCGCGGAAATCACCATAACGAACGTACTGTTCGGTCTTCGCGCTGTGGCGCATTTCGATCAGGTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCg                     <  2:1183516/236‑1 (MQ=255)
                                                                                                                                                                                                                     tttttGAATAGATTTCAATTTTGCCGTTTGGCGGACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGta                  <  1:578086/239‑1 (MQ=255)
                                                                                                                                                                                                                           aattgttttCAATTTTGCCCGTTGGCGTTCCCCGGGTCTTTTTCACCGGGACGGCGCGGAAGTCCCCATATCGAACGTACCGTTCGTTCCTCTCGCGTTGGCGCATTGCGATCAATTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGAtc            <  2:357591/233‑1 (MQ=255)
                                                                                                                                                                                                                                aTTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCCCCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCttt       <  1:167162/239‑1 (MQ=255)
                                                                                                                                                                                                                                aTTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCtt                       >  1:981598/1‑223 (MQ=255)
                                                                                                                                                                                                                                aTTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATACGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGGGACGCGTTGCGCACGGGCACCGTTCTGAGCCGCCTCCTAGAAAAATTTCAACCACGCCATTTCATCTTTAGCTTTGGAATAAAttcctta       >  2:870778/1‑233 (MQ=255)
                                                                                                                                                                                                                                aTTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGAATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCtt                       <  2:981598/223‑1 (MQ=255)
                                                                                                                                                                                                                                  ttCAATTTGGCCGCTTGGCGTACCCGGCGCATTTTTCCCCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCttt       <  1:868758/237‑1 (MQ=255)
                                                                                                                                                                                                                                     aaTTTTGCCGTTTGGCGTACCCAGCTCATTTTTCCCCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCTTTTCCGc  <  2:282093/239‑1 (MQ=255)
                                                                                                                                                                                                                                     aaTTTTGCCCTTTGGCGTCCCCAGCGGATTTTTCCCCGGGTCGGGACGGAAATCCCCATAACGAACGTACTGTTCGTTCGTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGGTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCTTTTCCGc  <  2:351306/239‑1 (MQ=255)
                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                        
GTGCAGCATCTTCGGTGTGAATAGTGATTGGTTCACGATCGGCGATCGCATATTTTTTACGCAGTTCCGCATAGTTAAGCTGACTGTGTAAACGGTGTGCCGGATGTGCGGTCAGAAGCTGTAACTGCTTCTCGTCGGCGGTACCTTTCCATTCATCAGGAGCCAGCCAGGTTGGGTGTGCCGGGCAATCCTTATAGCCAAATTTTTCCAACGTTTTTGAATAGATTTCAATTTTGCCGCTTGGCGTACCCAGCGCATTTTTCACCGGATCGGCGCGGAAATCACCATAACGAACGTACTGTTCGTTCTTCTCGCTGTGGCGCATTTCGATCAGTTTATTTTGCTGCCAGAAGGCATTAAACATTGGCATAGTGACGCGTTGCGCACGGGCACCTTTCTGAGCGGCATCATAGAAAAATTTCAGCCACGCCATTTCATCTTTACCTTCGGTATAGATCTCTTTTCCGC  >  NC_000913/1954877‑1955344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A