Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,041,503 T→G 11.6% G43G (GGT→GGG)  zinT → zinc and cadmium binding protein, periplasmic

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,041,5030TG11.6% 342.4 / 3.6 126G43G (GGT→GGG) zinTzinc and cadmium binding protein, periplasmic
Reads supporting (aligned to +/- strand):  ref base T (55/50);  new base G (13/4);  total (72/54)
Fisher's exact test for biased strand distribution p-value = 7.15e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 126 total aligned reads displayed.

CTGAGAAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCATAGAAA  >  NC_000913/2041274‑2041733
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        
cTGAGAAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTtga‑‑t                                                                                                                                                                                                                               >  1:458623/1‑239 (MQ=255)
   agaAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGtt                                                                                                                                                                                                                                       >  1:624608/1‑230 (MQ=255)
   agaAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGGCGAACAAAAAGCTGCAAATGGTGTTTTTga‑‑ggat                                                                                                                                                                                                                            >  2:1163358/1‑239 (MQ=255)
   agaAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGATGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTACCAAGGGTCGAACAAAAAGCTGCAAATGGGGTTTTTga‑‑taat                                                                                                                                                                                                                            >  2:1137744/1‑239 (MQ=255)
           aTGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGC‑AACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGGGTTTTTGA‑‑TGATGCCAATGTa                                                                                                                                                                                                                   >  1:422867/1‑239 (MQ=255)
             gCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAAACCTTAACAGAGGTCGAACAAAAAGCGGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTAc                                                                                                                                                                                                                  >  1:1068818/1‑239 (MQ=255)
                   gTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCCAACCCTTAACAGAGGTCGAACAAAAAGCTCCTAATGTGGTTTTTGT‑‑TGATCCCAATGTAAAAAAcc                                                                                                                                                                                                            >  2:1074589/1‑239 (MQ=255)
                                                  aagatgtttataagataaagatcatATACATTAACCAGGGAGGAAAAGGTTTTGGCGATTCGGTTTTACAAACTGGCTGTTGCGTTATGTGGCTTGATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCa                                                                                                                                                                             <  2:786801/219‑1 (MQ=255)
                                                   ttACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCaa                                                                                                                                                                            <  1:633326/239‑1 (MQ=255)
                                                   ttACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCaa                                                                                                                                                                            <  1:1163358/239‑1 (MQ=255)
                                                           taACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACCCGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGCGTTTTTGC‑‑TGATGCCAATGTCCAAAACCGAACGCTCCGTGCATGGGGTGGGGCGTGGCAAAcccgtta                                                                                                                                                                    >  2:1140749/1‑234 (MQ=255)
                                                           taACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTTA‑‑TGATGCCAATGACCAAACACGAACGCTCAGTGGCGGGGATGGAGTCTGGCAAACCGTTTa                                                                                                                                                                    >  2:1208984/1‑239 (MQ=255)
                                                           taACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCCCAGTGACTGGGATGGAGTCTGGCAATCCGTTTa                                                                                                                                                                    >  1:788891/1‑239 (MQ=255)
                                                           taACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCCCAGGGACTTGGATGGGGttgggaaacacgttt                                                                                                                                                                     >  2:316479/1‑224 (MQ=255)
                                                           taACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGCTTTTGC‑‑TGATGc                                                                                                                                                                                                                          >  1:355883/1‑185 (MQ=255)
                                                               aTTACACATCATTTACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCt                                                                                                                                                                <  1:1139203/239‑1 (MQ=255)
                                                                 tACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGGGTCTGGCAATCCGTTTATCCtt                                                                                                                                                               >  1:976076/1‑238 (MQ=255)
                                                                   cacaTCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGCTGCCAATGTACAAAACCGAACGCCCAGTGACGGGGGTGGAGTCTGGCAATCCGTTTTTCTTTTAc                                                                                                                                                            >  2:1139203/1‑239 (MQ=255)
                                                                   cacaTCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAG‑GGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACg                                                                                                                                                                                                       >  1:57363/1‑195 (MQ=255)
                                                                   cacaTCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAG‑GGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACg                                                                                                                                                                                                       <  2:57363/195‑1 (MQ=255)
                                                                      atcatATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGc                                                                                                                                                         >  1:209120/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCTAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑GGAAGCCAATGTACAAAACCGAACGCTCAGTGTCTTGGAGGGAGTCTGGCAACCCGCTTATCCTTTACtcgaa                                                                                                                                                       >  2:1287424/1‑235 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:686723/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:88256/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:312769/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:1075255/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGGGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:735974/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGGGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  2:702509/1‑239 (MQ=255)
                                                                        catATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGGGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGACCAGTGACTGGGATGGAGTCTGGAAATCCGTTTAACCTTTAAGGCaa                                                                                                                                                       >  2:682524/1‑239 (MQ=255)
                                                                        catATACATTAACCCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTAAAAAACCGAACGCTCATGTACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCaa                                                                                                                                                       >  1:587298/1‑239 (MQ=255)
                                                                             tccttAACTTTGGAGGAAACTTGTTTGGCGATTCGTTTTTAAAGACTGGCTTTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGCCAATCCGTTTATCCTTTACTGCAAAGTgg                                                                                                                                                  <  2:1022297/236‑1 (MQ=255)
                                                                                ttAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTTTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGATGTCGACCAAAACGCTGCTAAGGGGGTTTTTGC‑‑TGATGCCAATGTACAAAACCAAACGGCAAGGTACTGGGTTGGGGTCTGGCCATCCGTTTACCCTTTCCTgacaagggtaaa                                                                                                                                               >  2:839611/1‑228 (MQ=255)
                                                                                ttAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCCTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCCCAGTGACTGGGATGGAGTCTGGCAAAACGTTTATCCTTCACCGCAAAAGGGCaa                                                                                                                                               >  2:509480/1‑239 (MQ=255)
                                                                                 tAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATACGTTTAt                                                                                                                                                                   >  1:786801/1‑218 (MQ=255)
                                                                                  aaCTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAGCCCTTAACAGAGGTCGCACAAAAAGCTGCTAATGGGGGTTTTGC‑‑TGCGGCCAATGTACAAAACCAAACGCTCAATGACTGGGATGGAGTCTGGCAATCCGTTTATCTTTTACTGCAAATGGGCaa                                                                                                                                               >  1:1013084/1‑237 (MQ=255)
                                                                                  aaCTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCaa                                                                                                                                               >  1:380102/1‑237 (MQ=255)
                                                                                  aaCTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTAATGCaaaagggaaa                                                                                                                                               >  2:780341/1‑230 (MQ=255)
                                                                                  aaCTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGCCAATCCGTTTATCCTTTACTGCAAAGGGGCaa                                                                                                                                               >  1:1022297/1‑237 (MQ=255)
                                                                                    ctctGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACtt                                                                                                                                           >  2:422140/1‑239 (MQ=255)
                                                                                       tGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGACCAAAAAGCCGCTAATGGTGTTTTTGA‑‑TGTTGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTATTGCAAAGTGGCAAACTTGa                                                                                                                                         >  1:571386/1‑238 (MQ=255)
                                                                                         gaggaAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGa                                                                                                                                                                                               >  1:737157/1‑182 (MQ=255)
                                                                                         gaggaAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGa                                                                                                                                                                                         >  2:190333/1‑188 (MQ=255)
                                                                                         gaggaAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGCGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGAcc                                                                                                                                       >  1:268036/1‑238 (MQ=255)
                                                                                            gaAAGTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGGCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCg                                                                                                                                    <  1:1093637/238‑1 (MQ=255)
                                                                                            gaAACTTTTTTGTCGTTTCGCCTTTCCAAACTTGCTTTTGTTTTAGGTGTCTTTAGTGTTAGCGCTCCTGCCTTTTCGCATTGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCg                                                                                                                                    <  2:1174012/238‑1 (MQ=255)
                                                                                            gaAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCg                                                                                                                                    <  1:732010/238‑1 (MQ=255)
                                                                                                cttttttTGCGATTCGTCTTTACAAACTTGCTGTTGCTTTAGGTTTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCttt                                                                                                                               <  1:726072/236‑1 (MQ=255)
                                                                                                 tGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCAATCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGCCAATCCGTTTATCCTTTACTGCAACGTGGCAAACTTGACCCCGTCTTTc                                                                                                                              >  1:1086035/1‑239 (MQ=255)
                                                                                                   ttttGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCCAAGTGGAAAACTTAACCCCCTCTTTCag                                                                                                                            >  2:726072/1‑239 (MQ=255)
                                                                                                               gttttttCAAATTGGTTGTTGCTTTAGGTTTCTTTAGTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGAt                                                                                                                <  2:88256/236‑1 (MQ=255)
                                                                                                                      caaccgggCTGTTGCTTTAGGTTTCTTTATTGTTAGCGCTCCTGCCTTTTCGCAGGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGAta                                                                                                         <  2:1068818/233‑1 (MQ=255)
                                                                                                                       aaaCTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCGCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCa                                                                                                                                                                             <  1:502538/170‑1 (MQ=255)
                                                                                                                                       tAGGTGTTTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCGGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCt                                                                                        <  2:209120/239‑1 (MQ=255)
                                                                                                                                       tAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCaa                                                                                                                                                                            >  2:1350290/1‑155 (MQ=255)
                                                                                                                                       tAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCaa                                                                                                                                                                            <  1:1350290/155‑1 (MQ=255)
                                                                                                                                       tAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGCAAGCGGATGCAGATAAAACTAAAACATTTGCt                                                                                        >  1:377279/1‑239 (MQ=255)
                                                                                                                                        aGGTGGCTTGTTTGTTAGCCGTCCTGCCTTTTCGCATGGTTCACACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAAGGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTg                                                                                       <  1:839611/239‑1 (MQ=255)
                                                                                                                                             tCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGATGTGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGaaa                                                                                    >  1:182086/1‑239 (MQ=255)
                                                                                                                                             tCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTCCTGAAAtt                                                                                  >  2:110690/1‑239 (MQ=255)
                                                                                                                                              cTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCATTCACCCGGCAAACCCTTAACCGAGGTCGCACAAAAAGCTGCTAATGGCGGTTTTGA‑‑TGATGACATTGTACAAACAGGAACGCTCAGTGACTGGGATGGAGTATGCAAATCCGTTTATCCTTTACTGCAACAGGGCAAAATTGACACCGTTTTTACACCGAAAGCGGACGCACTTAAAACTAAAACATTTGCTCAAAtaa                                                                                 >  2:355218/1‑237 (MQ=255)
                                                                                                                                              cTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTa                                                                                 <  2:686723/239‑1 (MQ=255)
                                                                                                                                                ttttttttAGCCCTCCTGCCTTTTCGCATGTTCATCCCTCACCCGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGATGTGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTa                                                                                 <  2:182086/233‑1 (MQ=255)
                                                                                                                                                ttATTGTTTGCTCTTCTGACTTTCCGCATGGTCATCACACACTCGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTTCTAATGGGGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTaaa                                                                               <  2:1086035/239‑1 (MQ=255)
                                                                                                                                                       tAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCATTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGattatt                                                                        <  1:1152938/239‑1 (MQ=255)
                                                                                                                                                        aGCGCTCCTGCCTTTTCGCATGGTCATCAGTCACACGGCAAACCCTTAACAGAGGTCGAACAAAATGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCTCGTCTTTCAGACGAAAGTGGGTGCAGAAAAAACTAAAAATATATCTGAAATTAAAAAttaata                                                                       >  2:1201780/1‑239 (MQ=255)
                                                                                                                                                             tCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATcaca                                                                  <  1:110690/239‑1 (MQ=255)
                                                                                                                                                             tCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATcac                                                                   <  1:316479/238‑1 (MQ=255)
                                                                                                                                                                 gCCTTTTCACATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAgg                                                              <  2:1075255/239‑1 (MQ=255)
                                                                                                                                                                 cccTTTTCCCATGGTCATCACTCCCACGGCAAACCCTTAACAGAGGTCCAACAAAAAGCTGCTAATGGGGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAgg                                                              <  2:735974/238‑1 (MQ=255)
                                                                                                                                                                     tttCGTGTGGTAATCACTCACACGGCAAACCCTTAAAAGAGGGCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑AGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTAt                                                          <  2:458623/239‑1 (MQ=255)
                                                                                                                                                                      ttCGAATGGTCAGCACTCACTCGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTGGCTGAAATTAAAGATTATTATCACAAAGGTTATg                                                         <  1:1140749/239‑1 (MQ=255)
                                                                                                                                                                        cccATGGTCATCCCTCCCACGGC‑AACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCaa                                                      <  2:422867/237‑1 (MQ=255)
                                                                                                                                                                         gCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCTGTAGAAAGCGGATTCAGATAAAACTAAAACATTTGCTGAAATTAAAAATTATAATCACaaaagacattccc                                                      >  2:321045/1‑229 (MQ=255)
                                                                                                                                                                          cATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAAAAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAAc                                                     <  1:787078/239‑1 (MQ=255)
                                                                                                                                                                                 atcaCTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAAGTTATACaaaaaaaaac                                              >  2:246020/1‑231 (MQ=255)
                                                                                                                                                                                    cctcacACGGCAAACCCTTTACAGAGGGCGAACAAAAAGCGGGTAATGGTGTTTTTGA‑‑TGATTGCAATGTACAAAACCGGACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCgag                                           <  2:587298/238‑1 (MQ=255)
                                                                                                                                                                                         cacGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGCTAAACCTAAAACATTTGCTGACATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAaatgat                                      >  1:1291711/1‑239 (MQ=255)
                                                                                                                                                                                         cacGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCt                                                                                        <  1:185748/189‑1 (MQ=255)
                                                                                                                                                                                         cacGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCaaaaaaaaacaagaagat                                      >  2:808443/1‑223 (MQ=255)
                                                                                                                                                                                         cacGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCCGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAgatgat                                      <  1:1032821/239‑1 (MQ=255)
                                                                                                                                                                                         cacGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCCGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGAAATCGAgatgat                                      >  2:1032821/1‑239 (MQ=255)
                                                                                                                                                                                                   ccTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTGGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGtt                                                            <  1:149871/207‑1 (MQ=255)
                                                                                                                                                                                                     ttAACCGAGGTCAGACAAAAAGTCTATTATGGTTTTTTTGG‑‑TGATGCCAATGTACAAAGCCGAACGTTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTAAGCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCGCAAAGGTTATGCATCAGATAGCGAGATGATTGGCATTGAGGa                          <  2:571386/239‑1 (MQ=255)
                                                                                                                                                                                                      tAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCa                                                                                                                                                        >  1:677201/1‑112 (MQ=255)
                                                                                                                                                                                                      tAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCa                                                                                                                                                        <  2:677201/112‑1 (MQ=255)
                                                                                                                                                                                                      tAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGAc                         >  2:14265/1‑239 (MQ=255)
                                                                                                                                                                                                          atagGTCGAACAAAAAGCTGCTAATGGTGTTTGTGA‑‑TGATGCCAATGTAAAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCa                     <  2:788891/237‑1 (MQ=255)
                                                                                                                                                                                                            agGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCAtt                   >  1:901607/1‑239 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGattat                                                                         >  2:811955/1‑184 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGGAttg                  >  1:533158/1‑239 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCAttg                  >  1:765253/1‑239 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAAATTATTATCACAAAGGTTATGCAACAGAAATCGCGATAATTGGCATTGAGGACGGCAttg                  >  2:562244/1‑239 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAAATTATTATCACAAAGGTTATGAAAAAGATATCGAAATGATTGGCATTTAGGAAGGAAttg                  >  2:962062/1‑239 (MQ=255)
                                                                                                                                                                                                             ggTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGAAACCTTGACCCCGCCTTTCATAAGAAAGCGGTTGCGGTTAAACCTAAAAAATTTGCTGAAATTAAAGATTATTATAAAAAAGGTTATGCAACAGAAATAGAGATGATTGAAATTGAGGACGACAttt                  >  2:291856/1‑238 (MQ=255)
                                                                                                                                                                                                                caaaaaaaaaGCTGCTAATGGGTTTTTTGA‑‑AGGTGCCAATTTCAAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCAttgtt                <  2:901607/233‑1 (MQ=255)
                                                                                                                                                                                                                 gAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGa              >  1:841539/1‑239 (MQ=255)
                                                                                                                                                                                                                   aCAAAAAGCTTCTAATGGGGTTGTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATCGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGATGaa             <  1:1201780/238‑1 (MQ=255)
                                                                                                                                                                                                                   aCAAAAAGCTGCTAATGGTGTTTTTGA‑‑TTATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGaa             <  1:1208984/238‑1 (MQ=255)
                                                                                                                                                                                                                       agacaggctAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCa        <  1:438621/233‑1 (MQ=255)
                                                                                                                                                                                                                       aaaGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCa        <  1:14265/239‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        
CTGAGAAAGCCATGCTCTCGTTTCCTAAGAGTTGTTGCATTTTGCTATATGTTACAATATAACATTACACATCATATACATTAACTCTGGAGGAAACTGTTTTGGCGATTCGTCTTTACAAACTGGCTGTTGCTTTAGGTGTCTTTATTGTTAGCGCTCCTGCCTTTTCGCATGGTCATCACTCACACGGCAAACCCTTAACAGAGGTCGAACAAAAAGCTGCTAATGGTGTTTTTGA‑‑TGATGCCAATGTACAAAACCGAACGCTCAGTGACTGGGATGGAGTCTGGCAATCCGTTTATCCTTTACTGCAAAGTGGCAAACTTGACCCCGTCTTTCAGAAGAAAGCGGATGCAGATAAAACTAAAACATTTGCTGAAATTAAAGATTATTATCACAAAGGTTATGCAACAGATATCGAGATGATTGGCATTGAGGACGGCATTGTTGAATTCCATAGAAA  >  NC_000913/2041274‑2041733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A