Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F27 I0 R1 322 127.1 2757226 91.8% 2531133 223.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,285,460 T→C 10.5% S363P (TCG→CCG)  yejM → essential inner membrane DUF3413 domain‑containing protein, lipid A production and membrane permeability factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,285,4600TC10.5% 403.4 / 5.8 144S363P (TCG→CCG) yejMessential inner membrane DUF3413 domain‑containing protein, lipid A production and membrane permeability factor
Reads supporting (aligned to +/- strand):  ref base T (75/49);  new base C (3/14);  total (78/66)
Fisher's exact test for biased strand distribution p-value = 1.24e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 144 total aligned reads displayed.

CTGAGCAAAATATTTCGTTCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGA  >  NC_000913/2285230‑2285695
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
             ttCGTTCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTTTCGATGCCCACCGTACGCAccc                                                                                                                                                                                                                         >  1:493/1‑239 (MQ=255)
                  tCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGCCTATCAGCTGGGGTTATTCTCTTCAGATGGCTTTACCAGCCCGCTGTATCCCCAGGCATTGTTGTCAGATTTTTCGATCCCGAGCCTAGGAACCCAATcc                                                                                                                                                                                                                    >  2:1301684/1‑239 (MQ=255)
                     cgcgCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATCGCCTCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTTTCGCCAGGCATTGTTGTCAGATTTCTCGATGCGCGGCGTACGCACCCAACCcgcc                                                                                                                                                                                                                 >  1:1229380/1‑237 (MQ=255)
                        gcCATTTGGGCTCCGGCAACACTAACGCAAACGGCATCTTTGGCCTGTTCTTGGGCATCTCGCCGGGCTATATGGACGGCATTCTGGCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAg                                                                                                                                                                                                              <  2:1083719/239‑1 (MQ=255)
                          cATATGAGCTCCGGCAACCCTACAGAAAACGGCATCTTTGGCCTGTTCTATGGCATCCCGCCGGGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAAGCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCa                                                                                                                                                                                                            <  2:1015815/239‑1 (MQ=255)
                          atttgggctcccGGCAACCCTACACACAAGGGTTTTTTGTGCCTTTTGTTGGGCTTCTCGCGGAGCTTTATGGCCGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCa                                                                                                                                                                                                            <  2:566996/229‑1 (MQ=255)
                                  cTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACTCACCCAATCCGCCGAGCAGACCGcc                                                                                                                                                                                                     >  1:1136527/1‑238 (MQ=255)
                                  agacagCAACCCTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCa                                                                                                                                                                                                    <  1:982056/234‑1 (MQ=255)
                                   tCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCa                                                                                                                                                                                                    <  1:908867/238‑1 (MQ=255)
                                    ccGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCCGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGCACAGaacccccc                                                                                                                                                                                                   >  2:710417/1‑231 (MQ=255)
                                    ccGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCAc                                                                                                                                                                                                   >  1:1015815/1‑238 (MQ=255)
                                     ccgCAACCCTTCAGACAACGGGGTTTTTGGCCTGTTCTAGGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGc                                                                                                                                                                                                 <  2:696710/237‑1 (MQ=255)
                                     cGGCAACCCTACAGACAACGGCATCTTTGGCCTGTTCTAGGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGc                                                                                                                                                                                                 <  1:381904/239‑1 (MQ=255)
                                     cGGCAACACTACAGCCAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGATCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGc                                                                                                                                                                                                 <  1:49763/239‑1 (MQ=255)
                                          acccttacgaaaccGGCATTTTTGGCCTGTTTGTTGGCATCTCGGCGAGTTTTATGGACGGCATTCTGCCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTCCCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTgg                                                                                                                                                                                            <  2:287481/226‑1 (MQ=255)
                                            acTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTTTTTTCAGATTTCCCGATGCCCAGCGTACGCCCCCAATCCCACGAGCAGCCCCCCACGccggggg                                                                                                                                                                                           >  2:1212802/1‑232 (MQ=255)
                                             cTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATTGCCAGTCATTGTTGTCAAGTTTCTCGATGCCCAGCGAAACCCCCCAAACCGCCGAGCAGACCGcccccacggggaga                                                                                                                                                                                         >  2:718899/1‑227 (MQ=255)
                                               ccaccccccGGCTTTTTTGGCCTTTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCaa                                                                                                                                                                                       <  2:663614/231‑1 (MQ=255)
                                                   aCAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCTAGCGTACGCACCCAATCCGCCGAGCCGACCGCCCCGCacggggacccggc                                                                                                                                                                                    >  2:982056/1‑226 (MQ=255)
                                                     aaCGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGCCGAGAAGACCGCCACGcgtgggacaaactggac                                                                                                                                                                                 >  2:1093156/1‑223 (MQ=255)
                                                      ccGGCATTTTTGGCCTTTTCTATGGCATTCCGCCGAGCTATTTGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAActggctg                                                                                                                                                                                <  1:934940/238‑1 (MQ=255)
                                                       cGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGGGGATCAActggctgg                                                                                                                                                                               >  1:663614/1‑239 (MQ=255)
                                                        ggCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGCGCGTACGCACCCAATCCGACGAGCAGAACGCCACGCCGGGGACAAACAGGCgggg                                                                                                                                                                              >  2:659942/1‑239 (MQ=255)
                                                        ggCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGTTCAACTGGCTggg                                                                                                                                                                              >  1:1092548/1‑239 (MQ=255)
                                                                    cTGTTCTATGGCATCTCGCCGAGTTTTATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTCCTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGcac                                                                                                                                                                  <  1:816339/238‑1 (MQ=255)
                                                                       ttCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCGAACCGCCCCGCAGTGGCACAACTGGCCGGGACGCtccaccaaaaa                                                                                                                                                               >  2:766747/1‑229 (MQ=255)
                                                                           ttGGCTTCTCGCCGAGCTTTATGGACGGAATTCTGGCGACCCGTACCCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGAt                                                                                                                                                          <  2:1092548/238‑1 (MQ=255)
                                                                               cctctcGCCGAGCTATATGGACGGCATTCTGTCGCCCCGTACGCCTGGGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAAc                                                                                                                                                       <  1:762971/236‑1 (MQ=255)
                                                                                 tctcGCCGAGCTATATGGTCGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACAAGACCGCTGTATCGCCAGGAATTGTTGTCAGATTTCTCGATGCCGAGCGTACGTCCACAACCCGACTAGCAGACCTCCCACCAGTGGGCCAGACGGGTGGTACACCA‑CGCAAAAGACGAAAAccag                                                                                                                                                    >  2:648348/1‑237 (MQ=255)
                                                                                 tctcGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCaa                                                                                                                                                                                       <  2:158568/205‑1 (MQ=255)
                                                                                 tctcGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCCACCGTACGCACCCAATCCGCCGAGCAGACCGCCACGCAGTGGGTCAACTGGCTGGGAAGCCA‑CGCCCAAGAAGACAAccac                                                                                                                                                    >  2:922083/1‑237 (MQ=255)
                                                                                 tctcGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGGCCGATTTCTCGATGCCGACCGTACGCCCCCAATCCGAAGAGCAGACCCCCACGCAGTGGGCCAACCGGTTGGGACGCTA‑CGCCCAAAAAAAAAACCGc                                                                                                                                                    >  2:1037192/1‑239 (MQ=255)
                                                                                                   aCGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCGTGGGCGCAA‑GCCGAAAGAAGAAAACCACTGGTTTCCTTGGGttttt                                                                                                                                  >  2:94734/1‑237 (MQ=255)
                                                                                                     ggCCTTCTGCCGCCCCGTGCGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGtttcttt                                                                                                                                <  1:1007152/239‑1 (MQ=255)
                                                                                                     ggCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGCGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CTCCAAAAAAGATAACCCCCGGTTCTCAGGGGtgtcttt                                                                                                                                >  2:348283/1‑239 (MQ=255)
                                                                                                     ggCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGtttctt                                                                                                                                 >  1:979799/1‑238 (MQ=255)
                                                                                                     ggCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACAGCCACGCAGTGGATCAACTGGCTGGGACCATA‑CGCACAAGCAAAAAAACGCGGGGTCCAGGGGGtttctt                                                                                                                                 >  2:305936/1‑238 (MQ=255)
                                                                                                     ggCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCAATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACCCAGGGGATCAACTGGCTGGGACGCCA‑CGCCCAATAAGAGAAACGCGGGGTCTCGTGGGgtttttt                                                                                                                                >  2:1364354/1‑239 (MQ=255)
                                                                                                         ttCTGTCCACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGGTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCaa                                                                                                                             <  1:151792/238‑1 (MQ=255)
                                                                                                          caggagatgtttataagagaccgCATTAATTACTTCGCTTAATCAGCAAGGTTATCAGCTGGGGTTATTCTCATCAGATGGCTGTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAAt                                                                                                                            <  1:1317913/216‑1 (MQ=255)
                                                                                                               cGACCCGGACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACt                                                                                                                      <  1:710417/239‑1 (MQ=255)
                                                                                                                gACCCGTGCGCCTGCGGCATTAATTACTGGGCTTAATCAGCGAGGCTTTTAGCTGGGGTTATTCTCAACAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTa                                                                                                                     <  1:1040549/239‑1 (MQ=255)
                                                                                                                 aCCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGCTGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAAAAGCAAACACCTGGGTCCCGGGGGGTTCTTTACATGGTACaaa                                                                                                                    >  2:578430/1‑239 (MQ=255)
                                                                                                                 aCCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGAACGCCACGCAGTGGGTCAACTGGCTGGGACGCTA‑CGCACAAGAAGCTAACAGAGGGTTCTCGGGGGTTTTTTTCAATGGTATTaa                                                                                                                    >  1:667872/1‑239 (MQ=255)
                                                                                                                 aCCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACCAGAAGCCCGCCACGCAGCGGACCACCTGGCTGGG‑CGCTACCCCACACGAACAAAACCGCGGGTTCTTGCGGGtttttttaccaataacaaa                                                                                                                    >  2:728569/1‑227 (MQ=255)
                                                                                                                      tACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGGGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGGAATaaacttg                                                                                                               >  2:209299/1‑234 (MQ=255)
                                                                                                                      tACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGAAGGGGGTCAACTGGCTGGGACGCTA‑CGCCCAAACAGCTAACCGCTGGTTCCCGTGGGTTTTTTTCAATgggaacaactttg                                                                                                               >  2:1330387/1‑228 (MQ=255)
                                                                                                                        cGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCACCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CCCCAAAACAGATAACCGCTGGTTCCCGGGGGTTTTTTTCAAAGGTACTAAAAtatca                                                                                                             >  2:829608/1‑235 (MQ=255)
                                                                                                                              cGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGAACAAAAATTACCGAAAGc                                                                                                       >  2:113086/1‑239 (MQ=255)
                                                                                                                                gCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAAACCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGcac                                                                                                                                                                  <  1:60441/178‑1 (MQ=255)
                                                                                                                                  attaattaCTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCGCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAAt                                                                                                    <  1:240385/238‑1 (MQ=255)
                                                                                                                                  attaattaCTGCGCTTAATCAGCAAGGCTATCAGCGGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAAt                                                                                                    <  1:748125/238‑1 (MQ=255)
                                                                                                                                           tgcgttttgccccgcagggttgtaGCCGGGGTTATTCTCAACAGGTTGCCTTACCAGCCCGGTGGTACGCCAGGCAGTGGTGCCAGATTTCGCGATGTCGAGCGTACGCACGCAAACCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGACGATAACCGCTGGTTCACGTGGGTTTCTTTCAATGGTACTATCATTGACGACAGCAATCAGCAGGCAt                                                                                          <  2:134841/216‑1 (MQ=255)
                                                                                                                                           tGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGGACTAACATTGACGACAGCAATCAGCAGGCAt                                                                                          >  1:150896/1‑239 (MQ=255)
                                                                                                                                             cgcTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCAtt                                                                                         >  1:370974/1‑238 (MQ=255)
                                                                                                                                             cgcTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGGACTAACATTGACGACAGCAATAAGAAGGCAttt                                                                                        >  2:1353795/1‑239 (MQ=255)
                                                                                                                                                 tAATCAGCAAGGCTTTCAGCTGGGGTTATTCCCATCGGATGGCTTTCCCGGCCCGTTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCAc                                                                                    <  1:404457/239‑1 (MQ=255)
                                                                                                                                                 tAATCAGCAAGGCTATCCGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGGCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCAc                                                                                    <  1:899770/239‑1 (MQ=255)
                                                                                                                                                 tAATCAGCAAGGCTATCAGGTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGCATCCCCGGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGTTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCAc                                                                                    <  1:829608/239‑1 (MQ=255)
                                                                                                                                                 tAATCAGCAAGGCTATCAGCTGGGGTTATTCTCAGCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCAc                                                                                    <  1:211810/239‑1 (MQ=255)
                                                                                                                                                  aaTCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTACCATTGACGACAGCAATAAGAAGGCATTTGCACg                                                                                   >  1:788506/1‑239 (MQ=255)
                                                                                                                                                    tCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGa                                                                                 >  1:26114/1‑239 (MQ=255)
                                                                                                                                                       gCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTCCTAACATTGACGACAGCAATCCGCAGGCATTTGCCCGGCAat                                                                              >  1:967911/1‑239 (MQ=255)
                                                                                                                                                       gCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCACCAGGCATTTGCCCGGAAat                                                                              >  1:1223381/1‑239 (MQ=255)
                                                                                                                                                       gCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGAACAAGAAGATAACCGCGGGTTCCCGTGGGGTTTTTTCAATGGTACAAACATTGACGACAGCAATCAGAAGGCATTTACACGGaaaa                                                                              >  2:1158545/1‑238 (MQ=255)
                                                                                                                                                          aGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCCCAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAAAATTGACCACAGAAATCACACGGCAttttaccgggaaaata                                                                           >  2:67350/1‑226 (MQ=255)
                                                                                                                                                                  aGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCggggg                                                                   >  1:1001511/1‑237 (MQ=255)
                                                                                                                                                                     tGGGGTTATTCCCAACAGTTGGCTTTACCAGCCCGCTGTACCCCCAGGCATTGTTGTCAGATTTCCCGATGCCGAGCGTACGCCCCCAATCCGGCGAGCAGACCGCCACGCAGTTGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATACCCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGggcg                                                                   <  1:712307/236‑1 (MQ=255)
                                                                                                                                                                      ggggTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACCTTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCggcag                                                               >  1:677744/1‑239 (MQ=255)
                                                                                                                                                                      ggggTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGACCGGAAAAATAGCCGGGCggcag                                                               >  1:780990/1‑239 (MQ=255)
                                                                                                                                                                       gggTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCggcagg                                                              >  1:698687/1‑239 (MQ=255)
                                                                                                                                                                           tATTCTCATCAGATGGCTTTACCAGCCCGCTGTAACGCCAGGCATTGTTGTCAGATTTCTCGATGCCGGGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCaa                                                           <  1:1301684/238‑1 (MQ=255)
                                                                                                                                                                            aTTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGCCGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCCCAAAACGATAACCGCTGGGTCTCGTGGGCTTCTTTCAATGGTACTAACATTGACGACAGCAATCCGCAGGCATTTGCACGGAAATATAACCGGGGGGCCGGCaaag                                                         >  2:251959/1‑237 (MQ=255)
                                                                                                                                                                             ttCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGCCGCTA‑CGCACAAGAAGATAACCGCCGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACCCAAGCAATAAGAAGGCATTTGCACGGAAAAAAAGCCAGGCGGCAGGCaaagc                                                        >  2:1251180/1‑236 (MQ=255)
                                                                                                                                                                              tctcATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGCCAGCAATCAGCAGGCATTTGCACGGAAATAAAGCCGGGCGGAAGGAAATGTc                                                       >  1:863511/1‑239 (MQ=255)
                                                                                                                                                                                  atcaGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACATGAACATAACCGCTGGTTCTCGTGGGtttct                                                                                                                                  >  2:257622/1‑160 (MQ=255)
                                                                                                                                                                                  atcaGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGtttct                                                                                                                                  <  1:257622/160‑1 (MQ=255)
                                                                                                                                                                                  atcaGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGAt                                                    >  1:1116596/1‑238 (MQ=255)
                                                                                                                                                                                  aacaGATGGCTTTACCCGCCCGCTGTAGCGCCAGGCATTGTTGTCAGATTTCCCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATg                                                   <  1:1368016/237‑1 (MQ=255)
                                                                                                                                                                                    caggtttgtttaagggacatcTGTATCGCCAGGCATTGTTGTCAGATTTCCCGATGCCGGGCGTACGCCCCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGAc                                                 <  2:343273/219‑1 (MQ=255)
                                                                                                                                                                                         ggCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGAt                                            <  1:727272/239‑1 (MQ=255)
                                                                                                                                                                                           cTTTACCAGCCCGCTGTTGCGCCAGGCATTGTTGTCAGATTTCCCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGAt                                            <  1:1093156/237‑1 (MQ=255)
                                                                                                                                                                                              tACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATACCCGCTGGTTCTCGAGGGTTTCTTTCAATGGTACTCACATTACCGACGGCAATCAGCAGGCATTTGACTGGAATTATAGCCGGGCggccggacacgtcgctaaccgaatacacc                                       >  2:1077252/1‑216 (MQ=255)
                                                                                                                                                                                               aCCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATTCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCCGTGGATCAACTGGCTGGGACCCTA‑CGCACAAGAAGATAACCGCTGGTTATCGGGGGTTTCTTTCAATGGTACTAACATTGCCGACAGCCATCAGCAGGCATTTTCACGGAAATATACCCGGTCGCCAGGCCATATCGATGACCCGACCAAcca                                      >  2:773220/1‑238 (MQ=255)
                                                                                                                                                                                                cccgCCCGCTGGATCGCCGGGCTTTGTTGTCAGATTTCGCGATGCCGAGCGGCCGCCCCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACcgc                                     <  2:370974/236‑1 (MQ=255)
                                                                                                                                                                                                    cccGGTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGGCGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATcag                                                                                                 <  2:431211/175‑1 (MQ=255)
                                                                                                                                                                                                    cccGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATcag                                                                                                 >  1:431211/1‑175 (MQ=255)
                                                                                                                                                                                                    cccGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAAAATTGACGACAGCAATCAGCAGGCATTTGCACGGACATATAGCCGGGCGGCAGGCAATGTCGATGACCAGGTCAACAGCGTg                                  >  1:971032/1‑238 (MQ=255)
                                                                                                                                                                                                     cccgggtatccccggtgcttgttgTCAGATTTCCGGACGCCGAGCTGAGGCCCCCAACCGCACGGCCACGCCCCCACGCGTGGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGt                                   <  2:824607/218‑1 (MQ=255)
                                                                                                                                                                                                     ccGGTGTACCGCCAGGCATTGGTGTCAGATTTCCCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGt                                   <  1:1353795/236‑1 (MQ=255)
                                                                                                                                                                                                     ccGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAAGGTCGGTGACCAGATCAACCCCGTGc                                 >  1:1344488/1‑238 (MQ=255)
                                                                                                                                                                                                          gtttCGCCAGGCATTGTTGGCAAATTTCCGGATGCGGAGGGTGCGCCCCAAATCCGACGGACAGACCGCCACGCAGGGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATg                           <  2:979799/236‑1 (MQ=255)
                                                                                                                                                                                                                 cAGGCTTTTTTGTCAGATTTCCCGATGCCGAGCGTTCCCCCCCAACCCGACTGCCCGACCCACACGCATTTGTTCACCTGGCTTGGACGCTA‑CGCACAAGTAAATAACCGCTGGTTCCCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCg                    <  2:667872/239‑1 (MQ=255)
                                                                                                                                                                                                                   ggCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCaa                                                                                                                                                                                       >  2:716588/1‑75 (MQ=255)
                                                                                                                                                                                                                   ggCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAAcc                                       >  1:343273/1‑218 (MQ=255)
                                                                                                                                                                                                                     cATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACTCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTTACGACAGAAATCAGCAGGCATTTGCACGGAAATATATCCGGGCGGCAGGCAATGTCGAAGCCCAGATCAAcccaataccaaatgccaggctagat                >  2:10930/1‑216 (MQ=255)
                                                                                                                                                                                                                     cATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGAt                >  1:1040649/1‑239 (MQ=255)
                                                                                                                                                                                                                          ttgtCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTAACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCACGTGCTCAATGCACTGCGGGAATCTgg           >  2:421883/1‑239 (MQ=255)
                                                                                                                                                                                                                              ccagtttCCCGATGCCGAGCCTACGCACCCAATCCGACGAACAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCaaa       <  1:1158545/235‑1 (MQ=255)
                                                                                                                                                                                                                                   ttCCCGATGCCGAGCGTACCCCCCAAATCCGACGGGCCGACCGCCCACCAGTGGAGCAACTGGCTGGGGCGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCGATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGa  <  1:718899/239‑1 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                            
CTGAGCAAAATATTTCGTTCACGCGCCATATGAGCTCCGGCAACACTACAGACAACGGCATCTTTGGCCTGTTCTATGGCATCTCGCCGAGCTATATGGACGGCATTCTGTCGACCCGTACGCCTGCGGCATTAATTACTGCGCTTAATCAGCAAGGCTATCAGCTGGGGTTATTCTCATCAGATGGCTTTACCAGCCCGCTGTATCGCCAGGCATTGTTGTCAGATTTCTCGATGCCGAGCGTACGCACCCAATCCGACGAGCAGACCGCCACGCAGTGGATCAACTGGCTGGGACGCTA‑CGCACAAGAAGATAACCGCTGGTTCTCGTGGGTTTCTTTCAATGGTACTAACATTGACGACAGCAATCAGCAGGCATTTGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGA  >  NC_000913/2285230‑2285695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A