Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F27 I0 R1
|
120 |
139.6 |
2835800 |
98.5% |
2793263 |
226.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,256,061 |
A→C |
10.5% |
R135R (CGT→CGG) |
plsB ← |
glycerol‑3‑phosphate O‑acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,256,061 | 0 | A | C | 10.5%
| 292.9
/ 2.1
| 122 | R135R (CGT→CGG) | plsB | glycerol‑3‑phosphate O‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (29/74); new base C (6/11); total (36/86) |
| Fisher's exact test for biased strand distribution p-value = 5.71e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 122 total aligned reads displayed.
GCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACA > NC_000913/4255831‑4256288
|
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCCCCT‑TCCCTTTTTTCCGccccc > 1:194048/1‑237 (MQ=255)
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTTACCT‑CGCCCTTTTCACGcccccg > 2:47626/1‑237 (MQ=255)
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCCACT‑CCCCTTTTTTAccccccc > 2:644486/1‑237 (MQ=255)
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCTTTTTTCCGccccc > 1:1056035/1‑237 (MQ=255)
gCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCCTTTTTCCGccccc > 1:1083851/1‑237 (MQ=255)
cAAGCGTGGGCCTCCGGCAGCCGACCGTTGA‑CGGG‑CAAAGTGCGTCCGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTACCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑Ggcgcg < 2:756574/238‑1 (MQ=255)
cAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑Ggcg < 1:124035/236‑1 (MQ=255)
aaCGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑a < 1:1053262/239‑1 (MQ=255)
gggCCTACGCCAGCCAGACGTTGA‑CGGG‑CAAGGTGCATCCGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCaa < 2:476600/238‑1 (MQ=255)
gCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTTACTTCCACTTTTTTCAC‑CCCC‑CGCGCCC‑G‑CCCaaaac > 1:1195865/1‑237 (MQ=255)
aCGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGATTACGCGCCTCGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCTTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCAc < 1:158905/239‑1 (MQ=255)
cGGCAGCCAGACGGTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCTACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCAcc < 1:994991/239‑1 (MQ=255)
cggcaccAGGCGGTGG‑CGGGCCAAGGTGCACGCGCGCCTCGCGCGCCTGTTTCTGAGCGA‑TAGTTTTACCCGGGCCGT‑TTTCATCCGCCATACGGCGCAGCGAAACCGACGGCGAGAAACGCACAAAACTGCCGGGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCAcc < 2:889632/234‑1 (MQ=255)
cgcgacccagaggtggcgggacAAAGTGCATACGCGCCGCGCGCCCCAGTTTGTGAGCGA‑TAGTTTTACCCGTGCCGT‑GTTCATCCCCCATCCGGCGCAGCGAAACGGACGGCGAGAACCGCACAAATCTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCAcc < 2:1274639/218‑1 (MQ=255)
cAGCCAGGCGTTAA‑GGGG‑CAATGGAAATACGCCCCACGCGCCCCAGTTTCGGAGCGA‑TAGTTTATCCCGTGCCGG‑GTTCACCCTCCATACGGCGCAGCAAAACTGACGGCGAGAAACGCACAAAACGGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCAcc < 2:667726/236‑1 (MQ=255)
gCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CCGCTTTTTTCCCCCCC‑GGCGCGC‑G‑ACCAAACATCACCcaca > 1:533516/1‑238 (MQ=255)
cggagTTGACCGGG‑CAAGGTGCATGCGCGCCCCGCGCGCAGGTTTCTGGGGGA‑TAGTTTTTCCCGTGCCGG‑GTTCACCGCCCATACGGCGCAGCGAAACTGACAGCGAGAAACGCACAAAACTGTCGCGACCGAGCCCCAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACAGCACCGaca < 2:910754/232‑1 (MQ=255)
aGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCTTTTTTCCGCCCC‑CGCGCCC‑G‑GCCCAAAATCAccccacccg > 1:7710/1‑231 (MQ=255)
aCGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑c < 1:81683/238‑1 (MQ=255)
cGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑c < 1:339893/237‑1 (MQ=255)
a‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AACCATACGCAGCGGC‑GGGGTCACCT‑CGCCTTTTTTACCCCCC‑CTTGCGC‑C‑ACCAAACATACCCGACCCAGG‑cccccac > 1:1293280/1‑235 (MQ=255)
gggg‑CAAGGGGCATCCGCGCCCGGCGCGCC‑GTTTTTGGACGACAAGTTTAACCCGT‑CCGTGGTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTCAAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAACCATCACCGACACTGG‑CACCATCTg < 2:821723/238‑1 (MQ=255)
cGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTg < 1:1060790/239‑1 (MQ=255)
aTACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAACCTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑Att < 1:252704/239‑1 (MQ=255)
tACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCCCCCCCC‑CGCGCGC‑C‑ACCCAAAATCACCGCCACTCG‑CACCACCTGCCCAA‑CCCG‑Agtt > 1:783451/1‑239 (MQ=255)
cgcCCCGCGCGCCAGTTTCGGGGCGA‑TAGTTTTAGCCGGGCCGT‑TTTCACCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGt < 2:533516/239‑1 (MQ=255)
ccccACGCGCCCCAGTTTCGGAGTGG‑TATTTTAGCCCGCGCCGT‑GTTCATCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGt < 2:171289/237‑1 (MQ=255)
ccACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑TGCCTTTTTTACGCCCC‑GGCGCCG‑G‑CACAAAAATCACCGCCAATAG‑CACCATACGCACAA‑ACAGAATTTGGGt > 1:1242075/1‑238 (MQ=255)
caggcgcgcCAGTTTCTGACCAA‑TAGTTTTATCCGTGCCTT‑GTTCATCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACCCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGc < 1:944215/236‑1 (MQ=255)
ccgcgcgCCGGTTTCTGCGTGA‑TGGTTTTATCCGCCCCGT‑TCACAGCCCCCATACGGCGCAGCGAAACGCACGGCGAGAAACCCCCAAAACTGGCCCGCCCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑CCCAAACATCACCGACACTGG‑CGCCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑t < 2:447032/238‑1 (MQ=255)
cgcggcccgtttgcggAGCGT‑TGGTTTTATCGTGGCGGT‑TTTCCTCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAGCGCACAAAACTGTCCCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGGTCG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑Ta < 2:148856/224‑1 (MQ=255)
cgcgccCCAGTTTCGGAGCAA‑TATTTTTACCCGGCCCTT‑GTTCATCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑Ta < 1:1395762/239‑1 (MQ=255)
gcgggcCATTTTCCGAGCGT‑TAGTTTTACCCGGGCCGT‑TTCCACCCCCCATACGGCGCAGGGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TAc < 2:1056035/239‑1 (MQ=255)
gcCAGTTTCTAGGCGT‑TATTTTTATCCGTGCCCG‑GTCCACCCGCCATCCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGACGCGCACGTGCCACCGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑ACTCATACGACGCGGC‑GGGTTCACTC‑CGCGTTTTTCCCGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGTTg < 2:1293280/239‑1 (MQ=255)
gcCAGTTGCTGAGCGA‑TAGTTTTACCCGTGCGGT‑GTTCACCCGCCATACGGCGCAGCGAAACGGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTg < 2:369910/239‑1 (MQ=255)
gcCAGTTGCGGGGCGA‑TGGTTTTGCCCGGGCCGT‑GTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCAAAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTCCG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTg < 2:684092/239‑1 (MQ=255)
ttCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAAt < 1:130875/238‑1 (MQ=255)
cggggggA‑TAGTTTTATCCGGGCCTG‑GTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCga < 2:635477/233‑1 (MQ=255)
cTGAGCTA‑TAGTTTTACCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACGGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCga < 1:47626/239‑1 (MQ=255)
tggtcgttagtttgcgccgtgccgt‑cTACATCCGCCATACGGCGCAGCGAACCTGATGTCGAGAACCGCACAAACCTGCCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCCCGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑AGTTGGGTTGC‑TACGGTGCAAATCgag < 2:1217568/223‑1 (MQ=255)
gCGA‑TAGTTTTGCCCGGGCCGT‑GTGCAGCCCCCATAGGGCGCAGCAAAACTGACGGCGAGAAACGCACAAAACTGTCGCCACCGAGCCGCAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 2:179940/238‑1 (MQ=255)
gCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 1:830979/238‑1 (MQ=255)
gCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 1:1048743/238‑1 (MQ=255)
gCGA‑TAGTTTTACCCGTGCCGT‑GTTCCACCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 2:277449/238‑1 (MQ=255)
gCGA‑GAGTTTTACCCGTGCCGT‑GTTCCTCCGCCATACGGCGCAGCGAAACTGACGCCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTCCG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 1:958708/238‑1 (MQ=255)
ccgagagttttaccggcgcgtggtTCACCCGCCATCCGCCGCAGCGAAACTGACGGCAAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 2:792208/216‑1 (MQ=255)
ttttccccgtccgtt‑gtTCACCCGCCAAACGGCGCAGCAAAACTTACGGCTAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTgg < 2:783451/225‑1 (MQ=255)
tttCTCCGTGCCGT‑TTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTgg < 2:1377677/238‑1 (MQ=255)
tttATCCGTGCCGT‑TTTCAACCGCGATACGGCGCAGAGAAACTGACGGGGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTgg < 1:385850/238‑1 (MQ=255)
tttATCCGTGCCGG‑TTTAACCCGCCATACGGCGCAGCGAACCTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTgg < 2:1101833/238‑1 (MQ=255)
ttgtCCGTGCCGT‑TTTCAGCCGTCATACGGCGCAGAGAAACTGACGGCGAGAAACGCCAAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCTTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 2:1292695/236‑1 (MQ=255)
ttATCCGTGCAGT‑TTCCAACCGCCATCCGGCGCAGCGAAACGGACGGCGAGAAACGCCCAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 1:644486/239‑1 (MQ=255)
ttATCCGCGCCTT‑GTCCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 2:607770/239‑1 (MQ=255)
ttAGCCGGGCCGT‑GTTCACCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 2:544950/239‑1 (MQ=255)
ttACCCGTGCCGT‑TTCCATCCGCCAACCGGCGCAGCGAAACTGACGGCGAGAACCGCACAAAACGGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 2:1382619/239‑1 (MQ=255)
taagccgggccgt‑gTTCATCCGCCATACGGCGAAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGaa < 1:579885/235‑1 (MQ=255)
tgccgt‑gTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGCGGGGTCCACTT‑‑GCCTTTTTTTCCGCCC‑CGCGCCC‑C‑GCCAAACACCACCCACCCTGGCCCCCACCTCCCCA‑‑CCAA‑ATTTTGGGTGC‑TTCGGTGCAAAACgaaaatagcggggaaaagcttt > 2:1306597/1‑219 (MQ=255)
tgccgt‑gTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTTACTT‑CGCCCTTTTCACGCCCC‑GGCGCGC‑G‑GCCAAACAACACCGACACCGG‑GCCCCTCCGCCCAT‑ACCG‑CTTTGGGTTGC‑TACGGGGCCAAACgagagaattcgtggacaagcta > 2:170369/1‑221 (MQ=255)
gccgt‑gTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑TCCCCTTTTTACGCCCC‑GGCCCGC‑G‑GCCAAAAATCACCCACCCTTG‑CACCATCTTCCCCT‑CCAG‑ATTTTGGTTGC‑TTCGGGGCAAATTCAGATAGTCGTGGGACAGC‑TTaa > 2:929709/1‑239 (MQ=255)
gccgt‑gTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CCCCTTTTTTACGCCCC‑GGCGCGC‑G‑ACCAAACAACACCGACACCGG‑CACCATCTCCACAA‑CCAG‑ATTTGGGGTGC‑TACGGTGCAAATCGGGATAGTCGTGGAAAAGC‑TTaa > 1:834845/1‑239 (MQ=255)
gccgt‑gTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CCCCTTTTTCACCCCCC‑CGCGCGC‑G‑CCCCAACACCACCCACCCCGG‑CACCATCTTCACCT‑CCCA‑CTTTGGGGTGC‑TACGGTGCCAATCGAGATAATCGTGGAAAAGC‑TTaa > 2:1292722/1‑239 (MQ=255)
t‑gtTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑Ggcgcg < 1:466285/147‑1 (MQ=255)
ttCACCCGCCATACGGGGCAGCAAACCGGACGGCGAGAAACGCAAAAACCTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGAc < 2:428466/238‑1 (MQ=255)
aTCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑TCCCCTTTTTACGCCCC‑CGCGCGC‑G‑ACCAAACAACCACCACACTGG‑CCCCCTCTGCCCAC‑CCAG‑ACTTTGGTTGG‑CACGGTGCAAATCGAGATAGTCGTGGAAACGC‑TTaaaataatct > 2:117224/1‑230 (MQ=255)
gCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCttt < 1:274719/239‑1 (MQ=255)
ccATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CTCCTTTTTTACCCCCC‑CGCGCGC‑G‑Accccaca > 2:466285/1‑142 (MQ=255)
aTACGGCGCAGCGAAACTGACGGCCAGAACCGCACAAACCTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCgg < 1:1038953/239‑1 (MQ=255)
aTACGGCCAAGCGAAACGGACGGAGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCgg < 2:747739/239‑1 (MQ=255)
aCGGCGCAGGGAAACTGACGGCGAAAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCg < 2:629551/239‑1 (MQ=255)
aCGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGCCCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCg < 2:1111227/239‑1 (MQ=255)
cGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑CGCGCGC‑G‑ACCACACATCACCCACCCCGG‑CACCACCTGCACATCCCAA‑ATTTGGTTTG‑‑TATCGGGCCAATCGAGAAAGTAGGCGAACCAC‑TTAATAAACTCTTCTTTTGGCgc > 2:267617/1‑238 (MQ=255)
cGGCGCAGCGAAACGGACGGCGAGAAACGCAAAAAACGGCCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCgg < 2:775400/236‑1 (MQ=255)
cgcAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGAt < 1:206756/199‑1 (MQ=255)
cgcAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCgtgt < 1:62231/238‑1 (MQ=255)
gcAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACACTTCTTTCGGCGTGTaa < 1:516048/239‑1 (MQ=255)
cAGCGAAACTGACGGCGAGAAACGCCCAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTCCG‑CCGTT‑AAGCATACGCAGCGGC‑GGTTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAAt < 1:885248/239‑1 (MQ=255)
aGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCCCTT‑CCCCTTTTTCACCCCCC‑GGCGCAC‑C‑ACCAAAAAACACCGACCCCCG‑CGCCCTCTGCACCT‑CCAG‑ATTTTGGGTGC‑TACGGCGTAAAATGCAAAAGTAGTGGAACAACGTTAATAG‑CTTTTCtttttcgctggaatt > 2:1069791/1‑227 (MQ=255)
cGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCCTTTTTACCCCCC‑GGCGCGC‑G‑GCCCAACAACACCGACCCTGG‑CACCATCCGCACAT‑CCCG‑ATTTTGGTTGC‑TACCGGGGAAATCGAGATAGTCGTTGACCAGC‑TTAATAGACTCTTCTTTCGGCGTGGAATCgg > 2:40057/1‑239 (MQ=255)
acgaaCGGCGAGAAACGCACAAAACTGTCGGGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGGGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGaa < 2:194048/235‑1 (MQ=255)
cTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCTTTTTTACGCCCC‑CGCGCGC‑G‑ACCAAACATCACCGACACTCG‑CCCCATCTGCACAC‑CCCG‑ATTTGGGTTGC‑TACGGTGCAAAACGAGATAGTCGTGGaa > 2:206756/1‑199 (MQ=255)
cacaAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTTACGCCCC‑GGCGCGC‑G‑ACCAAAAATCCACCAAACCGG‑AACCATCTCCCCCT‑TCCG‑ATTTTGGTTGG‑TAACGTGGAAAACGAGGTAGTCCTGGGAGCGA‑TTAATATAACTTTCTTTCTGCGGCTGATATATGGAAACAAGCGGCccgccgg > 2:103021/1‑238 (MQ=255)
tGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCttt < 1:1191882/196‑1 (MQ=255)
cgACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCTTTTTCACGCCCC‑CGCGCGC‑G‑GCCAAACATCACCCACACCGG‑CACCATCTGCACCT‑CCCG‑ATTTGGGGTGC‑TACCGGGCAAATAGAGATAGTCGGGGGACAGC‑TTAATAAACTCTTCTTTCCGCGTGTAATAGGTGGACACACACGGGCCCCCGGGGATGAAcccaaa > 2:452083/1‑237 (MQ=255)
gACCGAGCCACAGTACAGCAAAAAA‑TTTC‑TGTCCG‑CCGTT‑AAACATACGCAGCGGC‑GGTTTCCCTT‑CCCCTTTTTCCCCCCCC‑GGCGCGC‑G‑ACAAAACATCCCCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGGGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAg < 1:378013/239‑1 (MQ=255)
gaccgagcaaaacaccagcaaaaa‑TTTC‑TTGCCGCCCTTT‑AACCAT‑CGCAGCGGG‑GGGTTTCCCT‑CCCCTTTTCCCCCCCCCGGGCGCGC‑A‑ACAAAACACCCCCGACACGGG‑CACCATCTGCACAT‑CCAG‑TTTTGGGTTGC‑TAGGGTAAAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAg < 2:1365607/220‑1 (MQ=255)
aCCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCCACACTGG‑CACCCTCTGCACAT‑CCAG‑ATTTTGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTTATAGACTCTTCTTTCTGCGTGTAATAGGTGAAAACACGCGGCCCGCCGTGAATGAACAAATAg > 1:210654/1‑238 (MQ=255)
aCCGAGCCACAGTAC‑GAGAAAAATTTTT‑TGGCCG‑CCGTT‑AACCATACGCAGCGGC‑GGGTCCACTT‑CCCTTTTTCCCCGCCCC‑GGCGCGA‑G‑TACAAACAACCCCACCGCTGA‑CCCCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTACAAATCGGGATAGTCGGGGAACAGA‑TTAATAACCTCTTCTTTCGGCGTTTAATAGGTGACCACCCGCGGCCCGCCGTGAATGAACACATAg < 2:866010/238‑1 (MQ=255)
cggcccccaggtccggagAAAAA‑TTTC‑T‑TACC‑CCCTTAAAGCTTCCCCGCCGGG‑GGTTTCATTC‑CGCTTTTTCCCCGCCCC‑GGCCCGC‑G‑CCCAACAACCACCGACACTGC‑CACCATCTGCACAT‑CCAG‑ATTTGGTTTGC‑TACGGTCCAAATGGAGATAGGCGTGGAACAGC‑TAAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAgcg < 2:1268869/222‑1 (MQ=255)
cggcccccaagtccggcaaaaa‑TTTCTTGTCCG‑CCTTA‑AAGCAACCGCGGCGGC‑GGTTTCACTC‑CCCTTTTTCCCCGCCCG‑GGCGCCC‑G‑CCAAAACACCCCCGACACTGG‑CACCACCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAgcg < 2:1195865/222‑1 (MQ=255)
gCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGGTCACTT‑CGCCTTTTTTACGCCCC‑CGCGCGC‑G‑ACCCAACATCACCGACACCTG‑CACCATCTGCACAT‑CCAG‑ATTTTGGGTGC‑TACGGGGCAAATCGAGATAATCGTGGAACAGC‑TTAATAGACTCTTCTTTCTGCGTGTAATAGGGTAACAAACGCGGCCCGCCCGGTGGGAACACAAAGcgccgccagcgcgtgc > 2:1341860/1‑228 (MQ=255)
cG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTTACGCCCC‑CGCGCGC‑G‑ACCCAACATCACCGACACCGG‑CCCCATCTGCCCAT‑CCCG‑ATTTGGGTTGC‑TACGGTGCAAATCCAGATAGTCGTGGGACAGC‑TTAATAGACTCTTCTTTCTGCGTGTAATAGGTGAACACACGCGGCCCGCCGCGAATTAAAACATAACGCGGCAGGAGCGGGCCGTCGATTTCCCGCgg > 2:920172/1‑238 (MQ=255)
taggcacgcgccgcGGC‑GCGTTCACTC‑CGCCTTTCCCACGCCCG‑GGCGCCC‑G‑ACAAAACATCACCGACACTGC‑CCCCATCTCACCAC‑CCGG‑ATTTGGTTTGC‑TACGGGGCAAATCGAGATGGTCGTGGAACAGC‑TAAAAAGACTCTCCTTTCGGCGTGTAATAGGGGAACACCCGCGCCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTaa < 2:19322/230‑1 (MQ=255)
ccacggaggcggc‑gGGTCGCCTT‑CTCC‑TTTGCCCGCCCC‑GGCGCGCGG‑ACCAAACACCCCCGACACTGG‑CACCATCTGCCCAT‑CCAG‑TTTTGGGTTGC‑TACGGGGCAAAGCGAGATAGTCGTGAAACGGC‑TAAATAGACTCTTCTTGCGGGGTGTAATAGGTGAACACCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGt < 2:916014/231‑1 (MQ=255)
tgTTCCCCT‑CCCCCTTTTCCCCCCCC‑GGGCGGC‑GCACCAAACCCCCCCGACACTGG‑CACCATCTGCACTC‑CCAG‑‑TTTGGGTTTCGTGCGGTGCAACTCGAGATAGTCGGGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGGGACCCCCCGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCAt < 2:796402/237‑1 (MQ=255)
ccctcccctttttcCACGCCCC‑GGCGCCC‑G‑ACAAAACACCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGAAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCa < 1:920172/230‑1 (MQ=255)
aCTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTaa > 1:5304/1‑138 (MQ=255)
aCTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTaa < 2:5304/138‑1 (MQ=255)
tcctcTTTTCCCCCCCCC‑GCCGCGC‑C‑ACAAAACCTCCCCCACACTGG‑CCCCCTCTGCACAT‑CCAG‑TTTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTGGGGGTGTAATAGGTGAACCCACGCGCCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGaca < 2:32343/235‑1 (MQ=255)
cGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGac > 1:180926/1‑237 (MQ=255)
gCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGac > 1:69688/1‑236 (MQ=255)
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GCAGGCAAACGTGGGCCTACGGCAGCCAGACGTTGA‑CGGG‑CAAAGTGCATACGCGCCACGCGCGCCAGTTTCTGAGCGA‑TAGTTTTATCCGTGCCGT‑GTTCATCCGCCATACGGCGCAGCGAAACTGACGGCGAGAAACGCACAAAACTGTCGCGACCGAGCCACAGTACAGCGAAAAA‑TTTC‑TGTACG‑CCGTT‑AAGCATACGCAGCGGC‑GGGTTCACTT‑CGCCTTTTTCACGCCCC‑GGCGCGC‑G‑ACCAAACATCACCGACACTGG‑CACCATCTGCACAT‑CCAG‑ATTTGGGTTGC‑TACGGTGCAAATCGAGATAGTCGTGGAACAGC‑TTAATAGACTCTTCTTTCGGCGTGTAATAGGTGAACACACGCGGCCCGCCGTGAATGAACACATAGCGCGGCAGTAGCGTGCCGTCGATTTCCAGCGGCTCTAACGGGTCAGGCAAGTCATGTGCCAGACA > NC_000913/4255831‑4256288
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
