Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F17 I0 R1
|
155 |
84.1 |
1797446 |
90.9% |
1633878 |
230.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
1,074,669 |
C→G |
14.2% |
A143G (GCG→GGG) |
rutR → |
rut operon transcriptional repressor for |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,074,669 | 0 | C | G | 14.2%
| 204.1
/ 2.1
| 99 | A143G (GCG→GGG) | rutR | rut operon transcriptional repressor for |
| Reads supporting (aligned to +/- strand): ref base C (45/34); new base G (6/11); total (52/47) |
| Fisher's exact test for biased strand distribution p-value = 1.17e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGAGGAGGTTGTAACAT > NC_000913/1074444‑1074904
|
ccGTGCTGCGGCAGTTTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGt < 1:609353/239‑1 (MQ=255)
ccGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTTATTGGAAATCGGCGCTGATTTCCGGt > 2:543835/1‑239 (MQ=255)
ccGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGGTGAGAAATCGGCGCTGATTGCCGGt > 2:222673/1‑239 (MQ=255)
cgggctgcGGCAGATTCTCGATATCGGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTTCATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGt < 2:505873/235‑1 (MQ=255)
cGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCCTTAATTGATGGGAAATCGGCCCTGATTGCCGGtt > 2:436215/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCCCGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCCCCGTTAATGGGTGAACTGCCGGGCGATTTGAAGGCATTAATTGGTGGGAAAAGCGCGGCGATTGCCGGGTgg > 1:140068/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGCGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGCCGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGGGCTGATTGCCGGTTgg > 2:421295/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGCTGCTGGCAGGCGCGCCGCCGTTAATGGTGGAACTGACGGGCGATTTGAGGGCATTAATTGGTGTGAAATAGGGGCTGATTGTCGGTggg > 1:731182/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGTTGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCGGATTGCCGGTTgg > 2:322382/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTgg > 2:810317/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTgg > 2:293181/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGAGGCTGATTGCCGGTTgg > 2:485554/1‑239 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCGTTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCGTTAATTGATGGAAAAACGGCGCGGATTGCCgggggg > 1:816337/1‑235 (MQ=255)
tgctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGCTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGGTAATGGATGAACTGACGGGCGTTTTGAAGGCATTAATTGATGGGAAATCGGCGTGGATTGCCGGTTgg > 2:554320/1‑239 (MQ=255)
ctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGCTGAACTGACGGGCGATTTGACGGCCTTAATTGTCGAGAAATCGGCGCTGATTGCCGGTTGGGt > 2:631174/1‑239 (MQ=255)
ctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTggg > 2:249359/1‑238 (MQ=255)
ctgcGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGt > 2:297519/1‑239 (MQ=255)
tggCAGTTTTTCTATATTTGGGTGGCACGTTTAAAAGGTGTGCGTGAAGATTTCGCCCCGCTGGCGGCGACGAAAGAGTTCAACCGTCTGAAGCTGGAAGTCTCGCGCGATTATCGGCAGGCTTCGCGCCTGTTCGGTATGGGGATGCTGTCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCaa < 1:705748/238‑1 (MQ=255)
tccggctggaCCCGTTAAAAGCGTTTCGTGAAGAGTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTGACGCGATGATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTcgcg < 2:344941/236‑1 (MQ=255)
gcACCGTTTAAAGCGTTGCGTTAAGATTTCGCCCCGTTGGCGGCGATCAAAGAGTCCAACCGTTTGAAGTTGGATGTCTCACGCGATTACCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTg < 1:189719/238‑1 (MQ=255)
gcACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGCCGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGGCCGGATTGCCGGTTGGGTCAAAAGCGGCAAAATCGCGCCGGTTGa > 1:153413/1‑239 (MQ=255)
gcACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGAGCCGATTg > 2:298551/1‑238 (MQ=255)
cGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAGGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGGTTTGAGGGGATTAATTTGTGCGAAATCGGCGCTGCTTGCCGGTTGGGGCAAAAGGGGCAAACACGCGCCGAtttagcc > 1:319740/1‑233 (MQ=255)
gTTAAAATGGTTTCGTGAAGATTTCGCCCCGCTGGCGGGGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCgc < 1:86816/239‑1 (MQ=255)
gTTAAAAGCGTTTCGTGAAGATTTCGCCCCGGTGGCGGCGATCAAAGAGGTCCTCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGAGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCgc < 2:491640/239‑1 (MQ=255)
ttAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCTCCGATTGATCCgca > 2:798978/1‑239 (MQ=255)
ttAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCgca > 1:64810/1‑239 (MQ=255)
ttAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGGCAAAAGCGGCAAACTCGCGCCGATTGATACgc > 2:50772/1‑238 (MQ=255)
tcttttgggggaaagttCCCCCGGGTGGCGGCGACCAAAGTGTACCGCCGGGTGAAGCTGGAAGGCTCCAGCGATTATCCGGAGGCTTCGGGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCAttt < 1:586166/224‑1 (MQ=255)
tttCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGCTTTGAAGGCATTAATTGTTGAGAAATCGGGGCTGATTGCCGGTTGGGTCAAAACCGGCAAACCCGGGCCGATTGTTCCCCACCATTTGAt > 1:36487/1‑239 (MQ=255)
tttCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGGGCCGATTGATCCGCAGCATTTGAt > 2:232204/1‑239 (MQ=255)
ttCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATAAGAAATCGGGGCTGATTGCCGGTTGGGTCAAAAGCGGCCAACTCCCGCCGATTGATCCGCAGCATTTGAtt > 2:186224/1‑239 (MQ=255)
cttccGCCCCGCTGGCGGCGATCAAAGAGTACACCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGAtt < 1:810317/235‑1 (MQ=255)
gCCCCGTGGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGc < 2:669369/239‑1 (MQ=255)
gCCCCGCTGGCGGCGATCAAAGAGGACATCCGTCTGAAGCTGGAAGTCGCACGCGATTATCCGCAGGCTTCGAGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGc < 2:384224/239‑1 (MQ=255)
gCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGTTGGGAAATCGGCGCTCATTGCCGGTTGGGTCAAAAGGGGCAAACTCCCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTcc > 1:26386/1‑238 (MQ=255)
ctggggggtgATCAAAGGGTTCTTCCGTGTGAAGTTGGAAGTCCCACGCGATTTCCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGTGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCa < 1:249359/230‑1 (MQ=255)
cTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGGCAAAAGCGGAAAAATCGCGCCGATTGATCCGCAGCATTTGATTTTTTTGATTTGGGGTTccc > 1:682854/1‑237 (MQ=255)
tGGCGGGGATCAAAGGGGACATCCGTTGGGAGGAGGAAGTCTCACGGCAATACCCGCAGGCTTCGCGCCTGTTCGGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACt < 2:265326/239‑1 (MQ=255)
tGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGGTCCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACt < 2:824903/239‑1 (MQ=255)
aTCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCAGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGACGAATTGAAGACATTAATTGAGGAGTAATCGGCTCTGATTGCCGGGTGGGCGCAACGCGGCAACCTCGGCCCCAGTGTTCCCCAGCATTTGATTTTTATTTTTTGGGGtttcgacaaacatc > 1:442852/1‑226 (MQ=255)
cagccGTCTGAAGGTGGAGGTCTCACGCGTTTTTCCGCGGGCTTCGCGCGTGTTCTGTACGGAGATGCGGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCg < 1:222673/236‑1 (MQ=255)
cATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTc > 2:489770/1‑238 (MQ=255)
cATCCCTCTGACGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTACTGTATGGCGATGCTGTCGTGCGCGCCGCTGTTAATGGATGCACTTACGGGCGATTTGGAGTCATTAATTGGTGAGCATTCGGCGCTGATTGCGGGTTGGTGCAAAACAGGAGAATGCACACCAGTTGATCCGCCGCATTCAGTTTTTATGATCGTGGGTTCCACCCaaacgtcacacggtttc > 1:742096/1‑223 (MQ=255)
aTCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGc < 2:64810/239‑1 (MQ=255)
ccGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGccc < 2:319740/239‑1 (MQ=255)
tCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGCATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGGCAAAAGCGGCAAACTCGCGCGGATTGATCCCAAGCATTTGGTTTTTATGGTTTGGGCTTCCACTCAAACATACCCCGGATTCGCCCCTc > 1:668339/1‑239 (MQ=255)
tGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGCTTTTTATGATTTGGGCTTCCCATCAACATTACGCCGATTTCGCCCCTCAg > 2:822403/1‑239 (MQ=255)
aGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAAATCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTACACTCACCATTACGCCGATTTCGCCCCTCCGGTg > 2:458958/1‑239 (MQ=255)
tcACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCACAATTACGCCGATTTCGCCCCTCAGggggggggggggga > 1:30022/1‑235 (MQ=255)
cACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGAGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑CCa > 2:21018/1‑239 (MQ=255)
gcgATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGGTTTGGGCTTCCCCTCAACATTACGCCGATTTCGCCCCTCAGGGGGGGGGGGGG‑ACA‑ggg > 1:459882/1‑238 (MQ=255)
gCTTCGGGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGcgcg < 2:682854/238‑1 (MQ=255)
gCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGGG‑ACA‑GGGGCGCCGT‑TGcgcgc > 2:429310/1‑238 (MQ=255)
ttgcgcgCCGGTTCGGTATGGAGATGCTGGCAGGCGGGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGa < 2:442852/235‑1 (MQ=255)
gcCTGTTTTGTATGGAGATTGTGGCGGGCGGGCCGTTGTTAAAGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTCCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGt < 1:322382/238‑1 (MQ=255)
ttttGTATGGGGATGCTGGCAGGCGGGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGGGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTAttttt < 1:489770/236‑1 (MQ=255)
ttCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTGAACA‑GG‑GCGACggtcgcgggtgaggggatttt > 2:218647/1‑219 (MQ=255)
tCTGTATGGAGAGTCTGGCAGGCGCGCCGTTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGGGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTAttttt < 2:802611/238‑1 (MQ=255)
tATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACCG‑TGCGCGGA‑GAGGGATTTTtcaatc > 2:590716/1‑239 (MQ=255)
tGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAttt > 2:482660/1‑178 (MQ=255)
tGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGAttt < 1:482660/178‑1 (MQ=255)
gaTGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGCCGT‑TGCGCGGT‑GAGGGGTTTTTCAATCAAACgg > 2:430047/1‑239 (MQ=255)
cTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACC‑GGCGCGGCGT‑TGCGCGGT‑GAGGGATTTTTCAATCaaaacggtgg > 2:602322/1‑232 (MQ=255)
cTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGGATTTTTCAATCCAACGGTTgg > 2:203924/1‑238 (MQ=255)
cTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCACGTGGCGGCGGAG‑ACAGGGGGCGAC‑T‑TTCCCGAT‑GGGGGGTTTTTCAATAAAAAGGGTgg > 1:557883/1‑238 (MQ=255)
ggcgcCGGTTTTAAGTGATGAACTGGCGGGCGATTTGAAGGCATTAATTGATGAAAAATCGGCGTTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCTCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTg < 1:421295/237‑1 (MQ=255)
cgggccgcTGGTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTg < 2:745893/235‑1 (MQ=255)
ccccgtttttAATGGTTGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAg < 1:430047/231‑1 (MQ=255)
gccggTTTTAATGGGTGAAGTGACGGGCGTTTTGAAGGCATTAATTGATGAGAAATCGGGGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGACGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAg < 1:297519/238‑1 (MQ=255)
gccggTGTTAAGGGATTGACTGGCGGGCGGGTTGAAGGATGTAATTGATGAGAAATCCGGGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGCTCCGCAGCTTTTGATTTTTATGATTTGGGCTTCAACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGc < 1:822403/239‑1 (MQ=255)
gccggTGTTAAAGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAg < 2:30022/238‑1 (MQ=255)
cgggtttAATGGATGAACGTGCGTGCGATTGGAAGGCATTAATTGATGAGAAATCGGGGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCg < 2:893693/233‑1 (MQ=255)
cgcttgtAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGAGGAGAAATCGGCGCTGATTGCCGGTTGGGGCAAAAGCGGCAAACGCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCg < 2:274949/232‑1 (MQ=255)
cgcTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGCTTTTTATGTTTTGGGCTTCCACTCACCATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGGG‑GAA‑GGCGGGACGG‑TGCGAGGT‑GAGGGATTTTTTTATACAAAGGGTGaaaaaatgaggggg > 1:663358/1‑229 (MQ=255)
cgcTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGG‑TGCGCGAT‑GAGGAATTTTTCAATTACACAGATGaaaaacagcatcgg > 2:432197/1‑229 (MQ=255)
ggtttaagggggtaaCGGACGGGGGTTTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGat < 1:798978/226‑1 (MQ=255)
tGTTAATGGATGAACTGGCGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGat < 2:816337/238‑1 (MQ=255)
tttAATGGATGAATTGACGGGGGATTTGAAGGCATTAATTGATGAAAAATCGGTGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGatta < 1:429310/238‑1 (MQ=255)
aTGAACTGACGGGCGATTTGAAGGCATTAATTGAAGAGAAATCGGCGCTGATTGGCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑a < 2:587859/238‑1 (MQ=255)
aaCTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGG‑TGCGCGCT‑GAGGGATTTTTCAATCAAACGGGTGAAAACGCGCAGCGGGTTTTTATTG‑Agggg > 2:572124/1‑239 (MQ=255)
aCGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGGATTTTTCAATCAAAAGGTTGAAAACGAGCAGCGGAGTATTTTTG‑GGGGGAttgg > 2:819058/1‑237 (MQ=255)
ggggGATTTGAAGGCCTTAATTGATGAAAAATCGGGGGTGATTGCCGGTTGGGTGAAAAGCGGCAAACTCGCGCAGATTGATCCGCGGCATTTGATGTTTATGATTGGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGATGCGGTG‑GCA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 1:631174/239‑1 (MQ=255)
gggCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 2:153413/239‑1 (MQ=255)
gggCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTAAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 2:668339/239‑1 (MQ=255)
gggtgtttGAAGGAATTAATTGAATAGAAAGCGGGGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 2:428687/233‑1 (MQ=255)
ggggATTTGAAGGCATTAATTGATGGGAAATCGGGGCTGATTGCCGGTTGGGTCAAAAGCGGAAAACTGGGGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 1:293181/235‑1 (MQ=255)
ggCAATGTGAAGGCAGTAATGGAGGAAAAAGCGGGGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGAGTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGAc < 2:177801/238‑1 (MQ=255)
cGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGCTTTCGCCCCTCAGGTGGCGCCGGTG‑GAC‑GGCCCCACCTGTGC‑CGCTCGGGGTCTTTTTCAACCAAA‑GGGTGAAAAAGGGCCACGGGTTATTATTGAAGGGGAtgaccac > 1:411135/1‑232 (MQ=255)
tGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TTGCCGGT‑GAGGGATTTTTCAATCAAACGGTTGAAAAAGTGCGGCGGGTTATTATTG‑AGGGGATTTGACACCGTTaa > 2:650685/1‑239 (MQ=255)
gaaggtctgaaTTTATGAGAAATCGGAGGTGATTGCCGGTTGGGTTAAAAGCGGCAAACTCGGGCCGATTGACCCGCAGCATTTGATTCTTATGATTTGGGCTTGCATGCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTGaaa < 2:894578/230‑1 (MQ=255)
ttAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGCCGT‑TGCGCGAT‑GAGGCATTTTTCAATCAAAAGGTTGAAAAAGGGCAACGGGTTATTTTTT‑GGGGGGTTTCAACACCTTAAAAAAGCCg > 1:594658/1‑239 (MQ=255)
atggGAGATCGGGGCTGATTGCTGGTTGGGTAAAAAGGGGCAAACTCGCGCCGATTGAACCCCAGGATTTGATGTTTATGATTTGGGCTTCCACTCAACATTCCGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAACCGGTTGAAAACGTGCAGCGGATTATTAGTG‑AGGGGATTCGACCACGTTAAAGATGCCGGaggagg < 1:738012/239‑1 (MQ=255)
tgaGAAATCGGCGCTGATTGCCGGTTTGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGaggagg < 2:731182/238‑1 (MQ=255)
gagaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGC‑TGCGCGAT‑GAGGGATTTTTTCATACAACGGTTGAAAACGGGCAGCGGATTATTATTG‑AGGGGGTTCGACCACGTTTAAGATGCCGAAGGAGGtt > 2:250488/1‑239 (MQ=255)
gaAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGAGGAGGTTg < 2:459882/238‑1 (MQ=255)
aaTCGGGGGTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCGGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGAGGAGGTTGTaa < 2:84024/239‑1 (MQ=255)
aaTCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGAGGAGGTTGTa < 2:134229/238‑1 (MQ=255)
ggCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGG‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGGTTATTATTG‑AGGGGATTCGACCACGTTAAAAATGCCGGAGGGGGTTGTAACAt > 2:589719/1‑238 (MQ=255)
|
CCGTGCTGCGGCAGATTCTCGATATCTGGCTGGCACCGTTAAAAGCGTTTCGTGAAGATTTCGCCCCGCTGGCGGCGATCAAAGAGTACATCCGTCTGAAGCTGGAAGTCTCACGCGATTATCCGCAGGCTTCGCGCCTGTTCTGTATGGAGATGCTGGCAGGCGCGCCGCTGTTAATGGATGAACTGACGGGCGATTTGAAGGCATTAATTGATGAGAAATCGGCGCTGATTGCCGGTTGGGTCAAAAGCGGCAAACTCGCGCCGATTGATCCGCAGCATTTGATTTTTATGATTTGGGCTTCCACTCAACATTACGCCGATTTCGCCCCTCAGGTGGAGGCGGTG‑ACA‑GGCGCGACGT‑TGCGCGAT‑GAGGTATTTTTCAATCAAACGGTTGAAAACGTGCAGCGGATTATTATTG‑AGGGGATTCGACCACGTTAAAGATGCCGGAGGAGGTTGTAACAT > NC_000913/1074444‑1074904
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
