Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F114 I0 R1
|
92 |
803.2 |
28831534 |
98.5% |
28399060 |
140.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,351,243 |
A→G |
5.3% |
Y595H (TAT→CAT) |
arcB ← |
aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,351,243 | 0 | A | G | 5.3%
| 3010.2
/ 94.5
| 908 | Y595H (TAT→CAT) | arcB | aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB |
| Reads supporting (aligned to +/- strand): ref base A (413/446); new base G (25/24); total (438/470) |
| Fisher's exact test for biased strand distribution p-value = 7.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 |
Only 100 of 929 total aligned reads displayed.
TCCCAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTACCTAATTTTTCC > NC_000913/3351095‑3351391
|
cccAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATaa < 3:6932869/149‑1 (MQ=255)
cccAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTCAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATaa < 4:5827528/149‑1 (MQ=255)
ccAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAAc > 2:4446066/1‑149 (MQ=255)
cAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACg > 3:1074659/1‑149 (MQ=255)
aGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGt > 1:6630459/1‑149 (MQ=255)
aaTTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGttt > 1:1687559/1‑149 (MQ=255)
aaTTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGttt < 2:2599916/149‑1 (MQ=255)
aTTTCTTGATCATCGCTGTAAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTCCTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACGAGCGGCGGTAAATCCTCGCGCGGATAACGGTTc < 2:2059066/149‑1 (MQ=255)
aTTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTc < 1:3728833/149‑1 (MQ=255)
ttGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAg > 1:523961/1‑149 (MQ=255)
ttGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAg < 1:6157469/149‑1 (MQ=255)
atcatcGCGGTTAGCACCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTCCCCGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCCCGCGGATAACGTTTCGTCAGTTc < 4:6519238/149‑1 (MQ=255)
tcatcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCa > 1:2102286/1‑149 (MQ=255)
tcatcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCa > 4:1173373/1‑149 (MQ=255)
catcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCAc < 3:5517222/149‑1 (MQ=255)
atcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCTCCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACg > 2:4651115/1‑149 (MQ=255)
atcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACg > 1:1197411/1‑149 (MQ=255)
tcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACga > 1:5987513/1‑149 (MQ=255)
tcGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACga > 4:6803151/1‑149 (MQ=255)
gcgGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACgaga < 3:1359177/149‑1 (MQ=255)
ttAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGata < 3:1631313/149‑1 (MQ=255)
cgcCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCa < 1:787147/149‑1 (MQ=255)
gAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCTCGAGAGATCTCCAGCCCg < 4:3268275/149‑1 (MQ=255)
aCAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACga < 1:4558950/132‑1 (MQ=255)
aaaGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCActgtag > 3:2477920/1‑126 (MQ=255)
aaGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCCTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCatat < 2:6255463/149‑1 (MQ=255)
aGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATc < 2:3199148/149‑1 (MQ=255)
ggCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTgg < 2:6039306/149‑1 (MQ=255)
gCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTc < 4:6248396/110‑1 (MQ=255)
aCTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACt > 2:3903175/1‑149 (MQ=255)
cTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTg > 2:6855068/1‑149 (MQ=255)
tCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACga > 3:2170788/1‑116 (MQ=255)
tCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGa > 4:799652/1‑149 (MQ=255)
tCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGa < 1:4986960/149‑1 (MQ=255)
aGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAat > 4:1624058/1‑149 (MQ=255)
gCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAg > 2:2904654/1‑124 (MQ=255)
gCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAata > 2:5222591/1‑149 (MQ=255)
tcatcCATTCCAGCATTGAGGTACTCTTGTTTGTCGTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGATCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAg < 3:4868877/149‑1 (MQ=255)
catcCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTc < 1:3924853/125‑1 (MQ=255)
atcCATTCCATCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGTCGGTAAATCCTCGCGCGGAAAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATAGCTGGCAACTGAATATCCAGCa > 3:4390942/1‑149 (MQ=255)
tcCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGcc < 1:1923351/118‑1 (MQ=255)
tcCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCaa > 1:100125/1‑149 (MQ=255)
ccATTCCAGCATTGAGGTACTCTTGTTTAACTTTCAGGACGTTACCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAac > 2:412543/1‑149 (MQ=255)
aTTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAacac < 4:3067478/149‑1 (MQ=255)
ttCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACAcc > 1:2617925/1‑149 (MQ=255)
ttCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACAcc < 1:3223877/149‑1 (MQ=255)
ccAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAg > 4:7000562/1‑149 (MQ=255)
cAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAgg > 2:5817928/1‑149 (MQ=255)
cAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAgg > 3:3961041/1‑149 (MQ=255)
ggTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCg > 1:7199179/1‑149 (MQ=255)
gTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGc > 4:4191818/1‑149 (MQ=255)
gTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGc > 4:1778552/1‑149 (MQ=255)
aatctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGccc < 2:3478324/147‑1 (MQ=255)
aCTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGccc < 3:872015/149‑1 (MQ=255)
tctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACga > 2:1507679/1‑84 (MQ=255)
tctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGat < 4:4564370/89‑1 (MQ=255)
tctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCTGCAACACCAGGTCGTATTCGCCCgg > 3:4667833/1‑149 (MQ=255)
tctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCgg > 4:2034348/1‑149 (MQ=255)
tctTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCgg > 4:5505189/1‑149 (MQ=255)
tctTGTTTGTCTTTCAACACGTTAGCTGTTAAGGCCACCAGCGGCGGTAAATGCTCGAGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCCGCCGGGTCGTATCTGGCAACTGAATATCCAGCAACACCCGGTCGTATTCGCCCgg > 4:4994831/1‑149 (MQ=255)
ttgtttgtCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGtt > 3:2806645/1‑149 (MQ=255)
tttgtCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGaa > 4:4806964/1‑113 (MQ=255)
tttgtCTTTCAGCACGGTAGCGGGTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGTGAGATATCCAGCCCGGTCATAACTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTaa > 4:4001974/1‑149 (MQ=255)
ttgtCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTaaa < 3:5016930/149‑1 (MQ=255)
gtCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCa > 4:2884800/1‑68 (MQ=255)
tCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACAt > 1:6948565/1‑149 (MQ=255)
tttCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACAtct > 2:4965981/1‑149 (MQ=255)
tttCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACAtct > 2:2259061/1‑149 (MQ=255)
tttCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACAtct > 3:3453888/1‑149 (MQ=255)
ttCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACAtctc < 3:324823/149‑1 (MQ=255)
tCAGCACGGTAGCAGTTAAGGCCACCAGCGCCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTACACGAGAGATATCCAGACCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCGCGGTTTAAACATCTcc > 4:3654198/1‑149 (MQ=255)
aGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAg > 3:3768385/1‑149 (MQ=255)
gCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAgc < 1:2434513/149‑1 (MQ=255)
ggTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGc > 1:4136443/1‑149 (MQ=255)
aGGCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTc < 2:6699633/149‑1 (MQ=255)
aGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTc > 4:1034441/1‑149 (MQ=255)
gtccaccaGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCa > 4:5349590/3‑149 (MQ=255)
ggCCACCAGCGGCGGTAAATCCTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCa > 1:3016225/1‑149 (MQ=255)
gCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCt > 3:5780334/1‑75 (MQ=255)
ccaccaGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATg > 3:6211150/1‑149 (MQ=255)
caccaGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATgg < 1:3568439/149‑1 (MQ=255)
caccaGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATgg > 3:1873700/1‑149 (MQ=255)
accaGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGt < 2:1338995/114‑1 (MQ=255)
caGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGa < 1:510536/149‑1 (MQ=255)
aGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGAc < 3:2962159/149‑1 (MQ=255)
cggcggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACAt < 1:1422370/149‑1 (MQ=255)
cggcggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACAt < 1:6330029/149‑1 (MQ=255)
ggcggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATc > 4:237856/1‑149 (MQ=255)
cggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCaa < 2:7042897/149‑1 (MQ=255)
ggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAAc < 4:269570/149‑1 (MQ=255)
ggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAAc < 2:5380623/149‑1 (MQ=255)
ggTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAAc < 2:1110380/149‑1 (MQ=255)
tCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGtt < 3:6803151/149‑1 (MQ=255)
tCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGtt < 2:1841483/149‑1 (MQ=255)
ccTCGCGCGGATGACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTa < 1:563202/149‑1 (MQ=255)
cgcgGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTACCTaa < 1:5362077/149‑1 (MQ=255)
ggATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTACCTAAttt > 2:7287977/1‑149 (MQ=255)
gATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGcc < 2:3650717/85‑1 (MQ=255)
tAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGTGACATCAACGCTGTTACCTAATTTTTc < 1:4459927/149‑1 (MQ=255)
tAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTACCTAATTTTTc < 3:6403820/149‑1 (MQ=255)
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TCCCAGAATTTCTTGATCATCGCGGTTAGCGCCGGAACAGAAAGCGGCTTACTCAGCACATCATCCATTCCAGCATTGAGGTACTCTTGTTTGTCTTTCAGCACGTTAGCGGTTAAGGCCACCAGCGGCGGTAAATCCTCGCGCGGATAACGTTTCGTCAGTTCACGAGAGATATCCAGCCCGGTCATATCTGGCAACTGAATATCCAGCAACACCAGGTCGTATTCGCCCGGTTTAAACATCTCCAGCGCCGCCTTGCCGGTCATGGCGACATCAACGCTGTTACCTAATTTTTCC > NC_000913/3351095‑3351391
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
