Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F187 I0 R2
|
632 |
116.8 |
4275814 |
98.0% |
4190297 |
140.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,693,752 |
A→T |
5.1% |
I495I (ATT→ATA) |
bcsA ← |
cellulose synthase, catalytic subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,693,752 | 0 | A | T | 5.1%
| 343.6
/ 7.1
| 98 | I495I (ATT→ATA) | bcsA | cellulose synthase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base A (47/46); new base T (2/3); total (49/49) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.32e-01 |
CGGCGCAGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATGCCGC > NC_000913/3693605‑3693897
|
cggcgCAGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGa < 3:819696/148‑1 (MQ=255)
gcgcAGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGCTTTGTACCATCCCGCGCGCCCAGCGAAt < 3:906704/148‑1 (MQ=255)
cAGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGc < 2:416497/149‑1 (MQ=255)
aGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGTCCAGCGAATACGCt < 1:806805/149‑1 (MQ=255)
cAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGa < 3:1023129/148‑1 (MQ=255)
cAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGAc < 2:751134/149‑1 (MQ=255)
aGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGTATTCGCTggg < 3:77517/148‑3 (MQ=255)
ggAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGAcc > 4:495424/1‑148 (MQ=255)
aaGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGa > 3:714370/1‑148 (MQ=255)
ccGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACg > 4:357380/1‑132 (MQ=255)
ccGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACg < 3:357380/132‑1 (MQ=255)
cGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGTATTCGCTg < 4:1054311/134‑1 (MQ=255)
cGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGTATTCGCTg > 3:1054311/1‑134 (MQ=255)
cGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCg > 4:988203/1‑148 (MQ=255)
cGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCAGCGCGCCCAGCGAATACGCTGACCGATATGCGCCg > 4:690045/1‑148 (MQ=255)
aaTGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGa < 3:721621/148‑1 (MQ=255)
cccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACttt < 3:495424/148‑1 (MQ=255)
cccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTc < 2:713805/149‑1 (MQ=255)
cccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTc < 2:73633/149‑1 (MQ=255)
ccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTc < 3:488289/148‑1 (MQ=255)
ccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCg < 1:1076884/149‑1 (MQ=255)
ccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCg > 1:1647/1‑149 (MQ=255)
ccGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCg > 1:41168/1‑149 (MQ=255)
aagTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGTATTCGCTgg < 1:172248/117‑2 (MQ=255)
aagTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGTATTCGCTgg > 2:172248/1‑116 (MQ=255)
aagTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCa > 4:734319/1‑148 (MQ=255)
aagTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAg > 2:253092/1‑149 (MQ=255)
aaCATGGCGTCGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCccg > 3:684047/1‑148 (MQ=255)
tGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCcgccgc > 4:606464/1‑148 (MQ=255)
ggCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCgccgcc < 4:36734/148‑1 (MQ=255)
gTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCg > 2:450399/1‑149 (MQ=255)
gTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCg < 1:352395/149‑1 (MQ=255)
ttGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCg > 4:737741/1‑148 (MQ=255)
ttGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCg > 3:826898/1‑148 (MQ=255)
ttGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCg > 4:117586/1‑148 (MQ=255)
gatgTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGa > 4:165630/4‑148 (MQ=255)
aCGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAAt > 1:257024/1‑149 (MQ=255)
gTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATgcgc > 2:890209/1‑108 (MQ=255)
gTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATgcgc < 1:890209/108‑1 (MQ=255)
gTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATAc < 1:449727/149‑1 (MQ=255)
aaCATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGc > 1:70129/1‑149 (MQ=255)
aaCATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGc < 1:940528/149‑1 (MQ=255)
aTAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTc < 1:135608/119‑1 (MQ=255)
aTAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTc > 2:135608/1‑119 (MQ=255)
aTAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCata > 1:658425/1‑149 (MQ=255)
tAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCatat > 1:997336/1‑149 (MQ=255)
aGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTGCCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCAtata > 2:631337/1‑149 (MQ=255)
aGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCatat < 3:734319/148‑1 (MQ=255)
cGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATAcgc < 2:84829/149‑1 (MQ=255)
tGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCgg < 3:165630/148‑1 (MQ=255)
tGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGa < 2:907546/149‑1 (MQ=255)
tGAGCAAACTTCAGCCCTTTACCGGGGAGAGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCTGCCTGCGGAATACGCATATACGCGGa < 2:1647/149‑1 (MQ=255)
gCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAgg < 4:714370/148‑1 (MQ=255)
gCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGt > 2:722849/1‑149 (MQ=255)
accTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATgcg < 3:688022/86‑1 (MQ=255)
aaCTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATgcg > 4:688022/1‑88 (MQ=255)
aaCTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAAt < 4:870559/128‑1 (MQ=255)
aaCTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAAt > 3:870559/1‑128 (MQ=255)
tCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGcc > 3:656803/1‑148 (MQ=255)
cTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACgg > 1:897402/1‑149 (MQ=255)
tttACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGt < 2:61291/149‑1 (MQ=255)
gCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCag < 4:166038/148‑1 (MQ=255)
cGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCaga > 4:188076/1‑148 (MQ=255)
ggTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGaa < 1:762543/149‑1 (MQ=255)
gTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAg > 1:283331/1‑149 (MQ=255)
ttATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATAc < 1:779211/103‑1 (MQ=255)
ttATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATAc > 2:779211/1‑103 (MQ=255)
ttATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAg > 3:826652/1‑148 (MQ=255)
ttATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCAATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGta < 4:174257/120‑1 (MQ=255)
ttATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCAATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGta > 3:174257/1‑120 (MQ=255)
cGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATgc < 2:257024/149‑1 (MQ=255)
cGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATg > 4:36904/1‑148 (MQ=255)
cGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCAt < 3:606464/148‑1 (MQ=255)
ggAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCt > 1:625959/1‑149 (MQ=255)
gAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCa > 2:318612/1‑95 (MQ=255)
gAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCa < 1:318612/95‑1 (MQ=255)
gAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCtt > 1:804693/1‑149 (MQ=255)
gAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCtt > 2:401067/1‑149 (MQ=255)
aaGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTc > 2:179026/1‑149 (MQ=255)
aaGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTc > 1:498829/1‑149 (MQ=255)
aGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCa < 1:722849/149‑1 (MQ=255)
gATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCa < 3:36904/148‑1 (MQ=255)
ttGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTc > 4:543243/1‑148 (MQ=255)
ccATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCaa < 3:26598/115‑1 (MQ=255)
ccATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCaa > 4:26598/1‑115 (MQ=255)
cATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGttt < 2:737280/149‑1 (MQ=255)
aTCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGttt < 3:988203/148‑1 (MQ=255)
tCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTc > 4:894654/1‑148 (MQ=255)
cccGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCa > 4:215017/1‑140 (MQ=255)
cccGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCa < 3:215017/140‑1 (MQ=255)
cccGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCg < 3:655374/148‑1 (MQ=255)
gcgcgcCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAg > 1:854272/1‑149 (MQ=255)
gcCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAAt < 1:179026/149‑1 (MQ=255)
ccAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATgc > 1:777008/1‑149 (MQ=255)
ccAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATgc < 2:679440/149‑1 (MQ=255)
aGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATgccg < 2:498829/149‑1 (MQ=255)
gCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATgccgc < 2:658425/149‑1 (MQ=255)
cGAATCCGCTGACCGATATGCGTCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCAACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCCGTCACGGTTTCGACAGCAATgccga < 4:570642/148‑2 (MQ=255)
cGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATgccgc > 3:467162/1‑148 (MQ=255)
|
CGGCGCAGTCAGGAAGATCAGCCGTGGAATGCCCGACAAGAAGTGGAACATGGCGTTGACGTAACATAGCCGCTGAGCAAACTTCAGCCCTTTACCGGTGAGCGGGTTATCGAGACGGAAGATTTGTACCATCCCGCGCGCCCAGCGAATACGCTGACCGATATGCGCCGACAGACTTTCGGTCGCCAGCCCCGCCGCCTGCGGAATACGCATATACGCGGAGGTATAGCCACGACGGTGCAACCGCAGAGAAGTATGCGCATCTTCAGTCACGGTTTCGACAGCAATGCCGC > NC_000913/3693605‑3693897
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
