Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F108 I0 R1
|
923 |
75.4 |
2440050 |
96.2% |
2347328 |
148.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,183,669 |
G→T |
100% |
G809C (GGT→TGT) |
rpoB → |
RNA polymerase, beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,183,669 | 0 | G | T | 100.0%
| 364.9
/ ‑6.7
| 112 | G809C (GGT→TGT) | rpoB | RNA polymerase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (56/55); total (57/55) |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 112 total aligned reads displayed.
ACCAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCC > NC_000913/4183523‑4183807
|
aCCAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGt > 1:1059991/1‑149 (MQ=255)
cAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGTGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTa < 2:1079732/149‑1 (MQ=255)
acCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACtt < 1:409973/149‑1 (MQ=255)
ccTGTATCAACCAGATGCCGTGTGTGTGTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGGCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTc < 1:493095/149‑1 (MQ=255)
cTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCg > 1:601244/1‑149 (MQ=255)
cTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCg < 1:1030949/149‑1 (MQ=255)
gTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGaa < 1:441507/149‑1 (MQ=255)
gTATCAACCAGATGCCGTGTGGGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGaa < 2:946692/149‑1 (MQ=255)
tCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGAc > 2:68826/1‑149 (MQ=255)
cAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGCACATGCGCGTAGCGTTCATGCGGGGGAATTGTTACAACTTCGATGACt > 2:624839/1‑149 (MQ=255)
tgattcagtgtttgtCTCTGTGGTAACCGGTTGAAAGTGGCGTCGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAAATGGCGCTTGTTAAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATc < 2:1053314/142‑1 (MQ=255)
aTGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGTTCCGTCCACCGCCCTCGGTGAACTGGCGATTGGTCAGAACATGCGCGAAGGGTTCTTGCCGTGGAATGGTTACAACTAGGAAGACGCCATcgg > 2:219612/1‑147 (MQ=255)
tGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTc < 1:311328/149‑1 (MQ=255)
tGCCGTGTGTGCCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTc < 1:380363/149‑1 (MQ=255)
gtgtgtgtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATTCCGTGGAATTGTTACAAGTTCGAAGACTCCGTCCTCGTaa > 1:602160/1‑148 (MQ=255)
gtgtgtgtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAAATGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTAt > 1:374471/1‑149 (MQ=255)
gtgtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGa < 2:518572/149‑1 (MQ=255)
tgtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCAACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAg > 2:98138/1‑149 (MQ=255)
gtgtctGGGGGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGc < 1:1142120/146‑1 (MQ=255)
gtCTGTGGGGGAACCGGGTGAACGTGGCGACGTGCGGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGc < 2:775701/149‑1 (MQ=255)
gtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGc < 2:393870/149‑1 (MQ=255)
gtCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGc > 1:1058598/1‑149 (MQ=255)
tctcTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCg > 1:679902/1‑149 (MQ=255)
tctGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGGTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCgtg > 2:345708/1‑149 (MQ=255)
ctGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAAGTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCgtgt > 1:245193/1‑149 (MQ=255)
tGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACACCTTCGAAGACTCCATCCTCGTATCCGAGCGtgtt > 2:181276/1‑149 (MQ=255)
tGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGtgtt > 2:342012/1‑149 (MQ=255)
tGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGtgtt > 1:1024031/1‑149 (MQ=255)
tGGGTGAACCGATTGAACGTGGCGACGTGCTGGCAGCCTGTCCGTCCCCCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGTGCGtgtt > 2:795147/1‑149 (MQ=255)
ggTGAACGGGTTGTAGGTGGCGAGGTGCTGGCTGACGGGCCGTCCACCGACCTGGGTGAACTGGCGCTTGGTCAGAACATGCGCGTTGCGTTCATGCCGTGTAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGtgttgt < 2:1059991/149‑1 (MQ=255)
tGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTc < 2:958862/149‑1 (MQ=255)
tGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTc < 2:838202/149‑1 (MQ=255)
gAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCa < 1:182149/149‑1 (MQ=255)
aCCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAgg > 2:162105/1‑149 (MQ=255)
aCCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGGTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAgg > 1:1208035/1‑149 (MQ=255)
ccGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGa > 2:691844/1‑149 (MQ=255)
ccGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGGATCCGAGCGTGTTGTTCAGGa > 2:1070876/1‑149 (MQ=255)
gcggAACGGGGCGACGCGCCGGCAGCCGGGCCGTCCCCCGACCGCGGGGAACTGGCGCGGGGTCAGAACATGCGCGTAGCGGGCATGCCGGGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGa < 2:648656/146‑1 (MQ=255)
tGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGAcc > 1:1115238/1‑149 (MQ=255)
tGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGAcc < 2:1036987/149‑1 (MQ=255)
aaCGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACACCTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGt > 2:538335/1‑149 (MQ=255)
gTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGttta > 2:558769/1‑148 (MQ=255)
gCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTcacc < 1:1101197/149‑1 (MQ=255)
cGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTcacca > 1:896084/1‑149 (MQ=255)
cGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTcacca < 1:728837/149‑1 (MQ=255)
gACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTccccac > 2:298261/1‑149 (MQ=255)
aCGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCaccacc < 2:444574/149‑1 (MQ=255)
aCGTGCTGGCAGACGGGCCGTCCACCGACCTCGGTGAACTGGCGCTGGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCATTTCaccacc < 2:313867/149‑1 (MQ=255)
gTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCAt < 1:564001/149‑1 (MQ=255)
cTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCca > 1:42143/1‑149 (MQ=255)
tGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCcac > 2:232777/1‑149 (MQ=255)
gCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACAt > 1:421434/1‑149 (MQ=255)
gACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCa < 2:914394/149‑1 (MQ=255)
aCGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCat > 2:1068148/1‑148 (MQ=255)
aCGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAg < 1:737093/149‑1 (MQ=255)
gtccgtccACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTGACAACTTCGAAGACTCCATCCTCGTATCCGACCGTGTTGTTCAGGAAGACCGTATCACCACCATCCACATTCATGaa > 2:245169/1‑149 (MQ=255)
tccCCCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCTTGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGCCCGTTTCACCACCATCCACATTCAGGAACTGGc > 2:192315/1‑149 (MQ=255)
cACCGCCCTCGGTGCGCTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGAGTTGTTCAGGAAGACCGTTTCACGACCAGCCACTTTCAGTAGCTGGCgg > 1:666145/1‑148 (MQ=255)
cACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCTCAATCAGTAACTCGCgt > 2:115646/1‑149 (MQ=255)
cACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACATCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCgt < 2:971153/149‑1 (MQ=255)
gACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGGTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCgtgtgt < 1:639164/149‑1 (MQ=255)
gACCTCGGTGAACTGGCGCTTGGGCAGAACATGCGCGTAGCGTTCATGCCGGGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCgtgtgt < 1:1004908/149‑1 (MQ=255)
cTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTc > 1:574629/1‑149 (MQ=255)
tCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTTTTACAACTTCGAAGACTCCAACCTCCTATCCGAGCGTGTTGTTAAGGAAGACCGTTTCCCCACCATCCACATTCAGGAACAGGCgtgtttgtac > 2:150942/1‑147 (MQ=255)
ggTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCg > 2:752734/1‑149 (MQ=255)
gTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCATGTGTGTCCCGt < 1:468249/149‑1 (MQ=255)
gTGAACTGGCGCTTGGGCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGt < 2:666431/149‑1 (MQ=255)
tGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTg > 2:1123322/1‑149 (MQ=255)
gAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGa < 1:758320/149‑1 (MQ=255)
aCTGGCGCTTGGTCAGAACATGCGCGTAGCGGTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGaca < 1:345708/149‑1 (MQ=255)
cTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCCCCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGacac > 2:54406/1‑149 (MQ=255)
cTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGATTCACCACCATCCACAATCAGGAACAGGCGTGTGTTTACCCTGacac > 2:779270/1‑149 (MQ=255)
tGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGCGCGTGTTGTTCAGGAAGCCCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACAcc > 2:53964/1‑149 (MQ=255)
tGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAAATTCGAAGACTCCATCATCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGAcccc > 2:1124046/1‑149 (MQ=255)
cgcTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCGGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAg < 2:1024031/149‑1 (MQ=255)
cgcTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCGCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAg < 1:36917/149‑1 (MQ=255)
gtggttCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCt < 1:146525/144‑1 (MQ=255)
cTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCt < 1:691844/149‑1 (MQ=255)
tGGTCCGAACATGCGCGTAGCATTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTgg < 1:705125/149‑1 (MQ=255)
gTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTgggg > 2:937450/1‑148 (MQ=255)
gTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGt > 2:390534/1‑149 (MQ=255)
gcAGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTc < 2:248600/148‑1 (MQ=255)
aGAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGCCACCAAGCTGGGGCCg > 2:1030153/1‑149 (MQ=255)
gAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCgg < 2:42143/149‑1 (MQ=255)
gAACATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGGTGTGCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCgg < 1:1029523/149‑1 (MQ=255)
aaCATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACCTTCAGGAACTGGCGGGGGTGGACCGGCTCAACAACCTGGGTCCggc > 1:291928/1‑148 (MQ=255)
aaCATGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCGGGGTCCGGa > 1:293585/1‑149 (MQ=255)
aCATGCGCGTAGCGTTCATGCCGTGTAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGaa < 1:500393/149‑1 (MQ=255)
aTGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGGACTGGCGTGTGTGTCCCGTGCCACCAATCAGGGTCCGGAaga > 1:768765/1‑149 (MQ=255)
aTGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTGCCGTTACACCAACCGGGGTCCGGAaga > 1:99906/1‑149 (MQ=255)
aTGCGCGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCATCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTCTCGTGTGTGTCCCGTGACACAAAGCTGGGTACCGAaga > 1:95637/1‑149 (MQ=255)
aTGCGCGGAGCGTTCATGCCGGGGACTTGTTACAACTTCGAAGACTCCCTCCTCGTATCCGAGCGTGGTGTTCAGGAAGACCGCTTCACCACCATCCACCTTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAaga < 2:901595/149‑1 (MQ=255)
gcgcGTAGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGTCCGTTTCAGCACCATCCACATTCTGGAACTGGCGTGTGTGTGCCGTTACACCAAGCTGGGTCCGGAAgaga < 2:1147959/149‑1 (MQ=255)
aGCGTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACAAAGCTGGGTCCGCAAGAGATCCCCg > 2:637287/1‑149 (MQ=255)
ggTTCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCt < 1:779270/148‑1 (MQ=255)
ttCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGa < 2:374471/149‑1 (MQ=255)
tCATGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGTAACTGGCGTGTGGGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGAc < 2:1026294/149‑1 (MQ=255)
aTGCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCCCCGCAGACaa > 2:775337/1‑148 (MQ=255)
gCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATcc < 2:1208035/149‑1 (MQ=255)
gCCGTGGAATTGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATcc < 1:752734/149‑1 (MQ=255)
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ACCAGAACACCTGTATCAACCAGATGCCGTGTGTGTCTCTGGGTGAACCGGTTGAACGTGGCGACGTGCTGGCAGACGGTCCGTCCACCGACCTCGGTGAACTGGCGCTTGGTCAGAACATGCGCGTAGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCC > NC_000913/4183523‑4183807
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
