Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F104 I0 R1	54	57.6	1336546	96.4%	1288430	141.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	USA300TCH1516_ALE	2,543,088	G→A	90.2%	R283K (AGA→AAA)	hlgA →	Gamma‑hemolysin component A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	USA300TCH1516_ALE	2,543,088	0	G	A	90.2%	167.5 / 8.3	62	R283K (AGA→AAA)	hlgA	Gamma‑hemolysin component A
Reads supporting (aligned to +/- strand): ref base G (3/3); new base A (24/31); total (27/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01

AACTACCTCCTTTAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAATCATCTTAA  >  USA300TCH1516_ALE/2542950‑2543224

aaCTACCTCCTTTAACTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGaa                                                                                                                                        >  1:494266/1‑140 (MQ=255)

aaCTACCTCCTTTAAATCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGAc                                                                                                                                        >  1:494153/1‑141 (MQ=255)

  cTACCTCCTTTAATTCAAAGGGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACAt                                                                                                                                      >  1:191770/1‑141 (MQ=255)

          tttAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACGTGGATGCTACCTATGCTTACGTGACAAAACATCGTTTAGc                                                                                                                              <  1:584686/141‑1 (MQ=255)

           ttAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGcc                                                                                                                             <  2:543470/141‑1 (MQ=255)

                tCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGa                                                                                                                        <  1:529019/141‑1 (MQ=255)

                tCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAAAATCGTTTATCCGTTGa                                                                                                                        >  2:250371/1‑141 (MQ=255)

                 cAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACATGACATCGTTTAGCCGTTGAt                                                                                                                       <  1:405845/141‑1 (MQ=255)

                      tGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGaaa                                                                                                                  >  1:55298/1‑141 (MQ=255)

                       ggCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGaaaa                                                                                                                 >  1:341295/1‑141 (MQ=255)

                          tttAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACat                                                                                                              <  2:257230/141‑1 (MQ=255)

                                 catcatTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCtt                                                                                                       <  1:610315/141‑1 (MQ=255)

                                 catcatTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCtt                                                                                                       <  2:596684/141‑1 (MQ=255)

                                   tcatTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTAGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATGGTTTAGCCGTTGATAGAAAACATGATGCtttt                                                                                                     >  1:446327/1‑141 (MQ=255)

                                         attaCAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAAc                                                                                               <  1:432605/141‑1 (MQ=255)

                                           taCAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCg                                                                                             >  2:435600/1‑141 (MQ=255)

                                            acaacaTTGTCACACGAAAGAGGTAAAGGTGATAAAAGGGAGTGTGGAATCACTTACGGCAGAATCATGGATGCGTCATGTGCTTACGTGTCACCACATCGTTTAGCCGGTTATAGAAAACATTATGGTTTTAAAAACCGa                                                                                            <  2:191714/141‑1 (MQ=255)

                                            acaacaGTGTCCAACGAAATAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACCTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGa                                                                                            <  2:276403/141‑1 (MQ=255)

                                               acacTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAAc                                                                                         <  2:467809/141‑1 (MQ=255)

                                               acaTTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAAc                                                                                         >  1:97436/1‑141 (MQ=255)

                                                caTTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGaaaag                                                                                        >  1:74906/1‑139 (MQ=255)

                                                caTTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACg                                                                                        >  1:175619/1‑141 (MQ=255)

                                                   tGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTa                                                                                     <  2:159836/141‑1 (MQ=255)

                                                             aaGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAata                                                                           <  1:386721/141‑1 (MQ=255)

                                                             aaGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAata                                                                           <  1:555264/141‑1 (MQ=255)

                                                              agagGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAataa                                                                          >  2:202503/1‑140 (MQ=255)

                                                                agGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACCGTTAAATATGa                                                                        >  2:584556/1‑141 (MQ=255)

                                                                     aaGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTAACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGa                                                                   <  1:451317/141‑1 (MQ=255)

                                                                      aGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGaa                                                                  >  2:176154/1‑141 (MQ=255)

                                                                        gTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACt                                                                <  1:440023/141‑1 (MQ=255)

                                                                             aaagGCGAGTTTGAAATCACGTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGACATCGTGTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGaaa                                                           <  2:164062/141‑1 (MQ=255)

                                                                                aGCGAGTGTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTTCAGTGAAATATGAAGTGAACTGGAAAaca                                                        <  2:642336/141‑1 (MQ=255)

                                                                                   gAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACAt                                                     <  1:277365/141‑1 (MQ=255)

                                                                                      tttGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGaa                                                  >  1:35477/1‑141 (MQ=255)

                                                                                        tggaaTCACTTACGGCAGAAACATGGATGCTACCTATGCTTACGTGACCAAACATCGTTTAGCCGTTGATAGAAAACATGCTGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGt                                                <  1:115915/138‑1 (MQ=255)

                                                                                          aaaTCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTACCTAAAAATGTAACTGGAAAACACATGAAGTaa                                              <  1:660248/141‑1 (MQ=255)

                                                                                            aTCACTTCCTGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTaaaa                                            <  2:336557/141‑1 (MQ=255)

                                                                                            aTCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTaaaa                                            <  2:337772/141‑1 (MQ=255)

                                                                                            aTCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCAGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTaaaa                                            <  2:282137/141‑1 (MQ=255)

                                                                                            aTCACTTACCGCAGAAACATGGATGCTACATAGGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTaaaa                                            <  1:423719/141‑1 (MQ=255)

                                                                                             tCACTTACGTCAGAACCCTGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTaaaaa                                           <  1:118082/141‑1 (MQ=255)

                                                                                              tcgtttcGGCAGAAACATGGACGCTACTTATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAAt                                          <  1:308206/135‑1 (MQ=255)

                                                                                                cTTACGGCGGGAACATGGATGCTACATATGCCTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTa                                        <  2:262981/141‑1 (MQ=255)

                                                                                                 ttACGACAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTaa                                       <  1:293502/141‑1 (MQ=255)

                                                                                                   tcGGCAGAAACGTGGAGGCGACATAATCTTACGTGACAAAACATCGTTTAGCCGTTGACAGAAAACATGATGCTTGTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTaaaa                                     <  2:423085/140‑1 (MQ=255)

                                                                                                       cAGAAACATGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTTGAAAACACATGAAGTAAAAATTAAAAGCAt                                 <  2:97436/141‑1 (MQ=255)

                                                                                                            aCATGGATGCTACATATGCTTACGTGACAAAACAGCGTTTAGCAGTCTACATTAGACGTGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCacac                            <  1:313638/141‑1 (MQ=255)

                                                                                                              aTGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCt                          <  2:341295/141‑1 (MQ=255)

                                                                                                              aTGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCt                          <  1:436517/141‑1 (MQ=255)

                                                                                                              aTGGATGCTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACAAATGAAGTAAAAATTAAAAGCATcacaaca                          >  2:12625/1‑138 (MQ=255)

                                                                                                                     cTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCtaaataaa                   >  2:3496/1‑141 (MQ=255)

                                                                                                                     cTACATATGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGaaaa                   >  2:121898/1‑141 (MQ=255)

                                                                                                                        cATATGCTTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAg                >  2:160878/1‑141 (MQ=255)

                                                                                                                         atatGCATACGCGACACAACATCGTTGAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGt               <  2:423883/141‑1 (MQ=255)

                                                                                                                            tgattgcGTGCCAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAGAAAAAAATTAAAAGTATAACACCGAAGTAAACAGTTCa            >  2:242112/7‑141 (MQ=255)

                                                                                                                            tGCTTACGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCa            >  2:221325/1‑141 (MQ=255)

                                                                                                                                 aCGTGACAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACAGGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAatcat       >  2:499546/1‑141 (MQ=255)

                                                                                                                                      aCAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAATCATCTTaa  >  1:392707/1‑141 (MQ=255)

                                                                                                                                      aCAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAATCATCTTaa  >  1:304311/1‑141 (MQ=255)

                                                                                                                                      aCAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATACCACCTAAGTAAACAGTTCAATCATCTTaa  >  1:642005/1‑141 (MQ=255)

                                                                                                                                      aCAAAACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGATACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTACATCATCTTaa  >  2:10679/1‑141 (MQ=255)

                                                                                                                                      aCAAAACATAGTCTAGCCGTTGCCAGAAAACATCATGCTTTTAAGAACCGAAACTGTACCTTTAAATATTAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAATCATCTTaa  >  2:460201/1‑141 (MQ=255)

AACTACCTCCTTTAATTCAAAGTGGCTTTAATCCATCATTTATTACAACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGCTTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAGTGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAAACAGTTCAATCATCTTAA  >  USA300TCH1516_ALE/2542950‑2543224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A