Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F50 I3 R1	283	58.3	1819865	98.8%	1798026	150.1

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,795,142	T→C	V297A (GTA→GCA)	gabP →	gamma‑aminobutyrate transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,795,142	0	T	C	100.0%	216.0 / NA	62	V297A (GTA→GCA)	gabP	gamma‑aminobutyrate transporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (44/18); total (44/18)

TATGTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGTAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATT  >  NC_000913/2795001‑2795289

tATGTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGtt                                                                                                                                             <  1:767734/150‑1 (MQ=255)

   gTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCt                                                                                                                                         >  2:415832/1‑151 (MQ=255)

   gTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCt                                                                                                                                         >  2:811481/1‑151 (MQ=255)

   gTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCt                                                                                                                                         >  1:841935/1‑151 (MQ=255)

    ttCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTg                                                                                                                                        >  2:188977/1‑151 (MQ=255)

      cTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGa                                                                                                                                       >  1:357629/1‑150 (MQ=255)

       tATTCTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGaa                                                                                                                                      >  2:819339/1‑150 (MQ=255)

        aTTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAAc                                                                                                                                     <  1:665097/150‑1 (MQ=255)

          ttttGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCg                                                                                                                                  >  1:343899/1‑151 (MQ=255)

             tGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGgcg                                                                                                                               >  1:880649/1‑151 (MQ=255)

                   cgtGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGtat                                                                                                                         >  2:23686/1‑151 (MQ=255)

                     tGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATAc                                                                                                                       >  2:493974/1‑151 (MQ=255)

                     tGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATAc                                                                                                                       >  2:666436/1‑151 (MQ=255)

                            aaTTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTc                                                                                                                 >  2:211870/1‑150 (MQ=255)

                             aTTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCa                                                                                                                >  1:665454/1‑150 (MQ=255)

                             aTTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCa                                                                                                                >  2:646384/1‑150 (MQ=255)

                                ccGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAgg                                                                                                             <  2:572706/150‑1 (MQ=255)

                                 cGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGAt                                                                                                           >  1:303934/1‑151 (MQ=255)

                                     gAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGctc                                                                                                       >  1:643951/1‑151 (MQ=255)

                                     gAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGctc                                                                                                       <  1:189002/151‑1 (MQ=255)

                                            cccGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTa                                                                                                     <  2:29128/146‑1 (MQ=255)

                                            cccGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTa                                                                                                     >  1:29150/1‑146 (MQ=255)

                                             ccGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCtt                                                                                               >  1:865866/1‑151 (MQ=255)

                                              cGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCtt                                                                                               >  1:722998/1‑150 (MQ=255)

                                               ggACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTaa                                                                                             <  2:760870/151‑1 (MQ=255)

                                               ggACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTaa                                                                                             <  1:435596/151‑1 (MQ=255)

                                                gACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTa                                                                                              >  2:344571/1‑149 (MQ=255)

                                                gACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTa                                                                                              >  2:664383/1‑149 (MQ=255)

                                                   tAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAgtcg                                                                                         >  2:663212/1‑151 (MQ=255)

                                                     aaaGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAgtcgtc                                                                                       <  2:497174/151‑1 (MQ=255)

                                                        gCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTcgcg                                                                                    <  1:474468/151‑1 (MQ=255)

                                                         ccGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCgg                                                                                   >  1:580732/1‑151 (MQ=255)

                                                             cGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGAt                                                                               >  2:506701/1‑151 (MQ=255)

                                                                   ttATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTccc                                                                         >  1:641827/1‑151 (MQ=255)

                                                                    tATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTccc                                                                         >  1:815053/1‑150 (MQ=255)

                                                                    tATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTccc                                                                         <  1:812255/150‑1 (MQ=255)

                                                                            ggTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATg                                                                <  2:683337/151‑1 (MQ=255)

                                                                            ggTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATg                                                                <  1:798628/151‑1 (MQ=255)

                                                                             gTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATgg                                                               <  1:565841/151‑1 (MQ=255)

                                                                                 tGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTa                                                            >  1:541309/1‑150 (MQ=255)

                                                                                       tGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCa                                                      >  1:129527/1‑150 (MQ=255)

                                                                                        tcTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCaa                                                     >  2:745228/2‑150 (MQ=255)

                                                                                                ttCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTa                                             >  1:742256/1‑150 (MQ=255)

                                                                                                 tCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTaa                                            >  1:95908/1‑150 (MQ=255)

                                                                                                     cATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAAccc                                       <  2:95886/151‑1 (MQ=255)

                                                                                                          gAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTAc                                  >  2:174008/1‑151 (MQ=255)

                                                                                                          gAAATTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTAc                                  <  1:600747/151‑1 (MQ=255)

                                                                                                           aaaTTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACg                                 <  1:680856/151‑1 (MQ=255)

                                                                                                            aaTTAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGt                                >  1:489253/1‑151 (MQ=255)

                                                                                                               tAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCACGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCCGTAAAACCCTGTACGTGGc                             >  2:112920/1‑151 (MQ=255)

                                                                                                               tAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGc                             >  2:276244/1‑151 (MQ=255)

                                                                                                               tAATCATGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGc                             >  1:148822/1‑151 (MQ=255)

                                                                                                                    aTGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGgtgt                        >  1:790227/1‑151 (MQ=255)

                                                                                                                     tGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGtt                       >  1:62400/1‑151 (MQ=255)

                                                                                                                     tGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGtt                       >  2:607053/1‑151 (MQ=255)

                                                                                                                     tGGACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGtt                       >  2:307639/1‑151 (MQ=255)

                                                                                                                       gACTGCGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTa                      >  2:804038/1‑150 (MQ=255)

                                                                                                                            cGTGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTcc                <  1:282653/151‑1 (MQ=255)

                                                                                                                              tGATATTACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTAATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCAc              >  2:809800/1‑151 (MQ=255)

                                                                                                                                    tACTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGgcgc        >  1:587410/1‑151 (MQ=255)

                                                                                                                                      cTTTCCGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCgg      >  1:41325/1‑151 (MQ=255)

                                                                                                                                          ccGCAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCAtt  <  1:138715/151‑1 (MQ=255)

TATGTTCTATTTTTGTCGTCGTGGCATTAATTCCGTGGAATATGCCCGGACTAAAAGCCGTCGGTTCTTATCGCTCGGTACTGGAATTGCTCAATATTCCCCATGCGAAATTAATCATGGACTGCGTGATATTACTTTCCGTAACCAGTTGCCTGAACTCGGCGCTGTATACCGCGTCAAGGATGCTCTACTCCTTAAGTCGTCGCGGTGATGCTCCCGCGGTAATGGGTAAAATCAACCGCAGTAAAACCCCGTACGTGGCGGTGTTACTCTCCACCGGCGCGGCATT  >  NC_000913/2795001‑2795289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A