Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F50 I1 R1	300	54.7	1718999	98.4%	1691495	149.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,706,632	T→C	T165A (ACC→GCC)	lepA ←	back‑translocating elongation factor EF4, GTPase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,706,632	0	T	C	100.0%	193.0 / NA	57	T165A (ACC→GCC)	lepA	back‑translocating elongation factor EF4, GTPase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (32/25); total (32/25)

TTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGTTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTCCATGGCGGTGTAGC  >  NC_000913/2706486‑2706778

tttAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTc                                                                                                                                                >  2:350179/1‑151 (MQ=255)

   aaTACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCt                                                                                                                                             <  2:626642/151‑1 (MQ=255)

      aCGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGa                                                                                                                                           >  2:523986/1‑150 (MQ=255)

         gATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAAc                                                                                                                                         >  2:366825/1‑149 (MQ=255)

          aTAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAgc                                                                                                                                      >  2:472019/1‑151 (MQ=255)

          aTAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAgc                                                                                                                                      >  2:503578/1‑151 (MQ=255)

             aGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAgcgc                                                                                                                                    >  2:315543/1‑150 (MQ=255)

              gTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCAc                                                                                                                                  <  1:145409/151‑1 (MQ=255)

                 aaaCAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACcgc                                                                                                                               <  2:144344/151‑1 (MQ=255)

                 aaaCAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACcgc                                                                                                                               <  1:135597/151‑1 (MQ=255)

                  aacaacGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACcgcg                                                                                                                              >  2:446313/1‑151 (MQ=255)

                     aacGCCCAGGTAGTTGTCGAACCATGAGTCGATCATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCCCACCAGACGTTCGAGAACGGCCTCCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTc                                                                                                                            >  1:505552/1‑150 (MQ=255)

                        gCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTg                                                                                                                        <  2:393074/151‑1 (MQ=255)

                        gCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTg                                                                                                                        <  1:543282/151‑1 (MQ=255)

                         cccAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTgg                                                                                                                       >  1:9241/1‑151 (MQ=255)

                          ccAGGTAGTTGTCGCACCATGAGGCGGTGATTAGTGCCTGCATCGGGCCTTCCGGATCGCCTTCCGGCCGCGGAATGTCGCGCACCAGACGCCCGAGAACGTCCTGCATACCAACGCCCGCTTTCGCTGAACAGCGCACCGCGTCGGTGGc                                                                                                                      >  1:532970/1‑151 (MQ=255)

                          ccAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGc                                                                                                                      >  1:348574/1‑151 (MQ=255)

                          ccAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGc                                                                                                                      >  1:295990/1‑151 (MQ=255)

                           cAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGc                                                                                                                      <  2:664247/150‑1 (MQ=255)

                            aGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCg                                                                                                                     >  2:794092/1‑150 (MQ=255)

                                    gTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGcc                                                                                                             <  1:527313/150‑1 (MQ=255)

                                    gTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGcc                                                                                                             <  1:742088/150‑1 (MQ=255)

                                      cGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCcgac                                                                                                          >  2:796326/1‑151 (MQ=255)

                                      cGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCcgac                                                                                                          <  2:284041/151‑1 (MQ=255)

                                       gAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCcgacg                                                                                                         >  2:72588/1‑151 (MQ=255)

                                        aaCCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGCTCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCcgacg                                                                                                         <  1:459198/150‑1 (MQ=255)

                                          ccATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGat                                                                                                       >  1:440833/1‑150 (MQ=255)

                                                      aaTTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATttct                                                                                          <  2:192339/151‑1 (MQ=255)

                                                          aGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTcc                                                                                       <  1:580437/150‑1 (MQ=255)

                                                            tGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGcc                                                                                    >  1:418728/1‑151 (MQ=255)

                                                                 gCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCAcg                                                                                 <  1:372888/149‑1 (MQ=255)

                                                                  cAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGt                                                                              >  1:849348/1‑151 (MQ=255)

                                                                   aaCGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCAACGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGtt                                                                             >  2:111926/1‑151 (MQ=255)

                                                                   aaCGGGCCTTCCGGATCGCCTTCCAGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGtt                                                                             <  2:739773/151‑1 (MQ=255)

                                                                            tCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATc                                                                      <  2:695385/149‑1 (MQ=255)

                                                                             ccGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCgg                                                                    <  1:131327/150‑1 (MQ=255)

                                                                               ggATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTg                                                                 <  2:418761/151‑1 (MQ=255)

                                                                                   cGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCGTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTAGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACCCGTTCAGGATCGGCTGCCgg                                                             >  1:796214/1‑151 (MQ=255)

                                                                                    gCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGc                                                            <  1:808342/151‑1 (MQ=255)

                                                                                     ccTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGc                                                            >  1:446515/1‑150 (MQ=255)

                                                                                         ccGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTc                                                       <  2:821546/151‑1 (MQ=255)

                                                                                                  gAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACAATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGtt                                              >  1:35391/1‑151 (MQ=255)

                                                                                                   aaTGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTc                                             >  1:775965/1‑151 (MQ=255)

                                                                                                         gcgcACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTAcc                                       <  2:683410/151‑1 (MQ=255)

                                                                                                            cACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGc                                    >  2:628273/1‑151 (MQ=255)

                                                                                                             aCCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGc                                    >  2:679131/1‑150 (MQ=255)

                                                                                                                     ttCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCg                           >  1:181780/1‑151 (MQ=255)

                                                                                                                      tCGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCg                           <  2:525880/150‑1 (MQ=255)

                                                                                                                       cGAGAACGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCg                           >  1:496962/1‑149 (MQ=255)

                                                                                                                           aaCGTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATcc                     <  2:348597/151‑1 (MQ=255)

                                                                                                                              gTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCAtt                  <  2:558021/151‑1 (MQ=255)

                                                                                                                              gTCCTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCAtt                  >  2:777834/1‑151 (MQ=255)

                                                                                                                                ccTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCAttt                 <  1:18821/150‑1 (MQ=255)

                                                                                                                                 cTGCACACCAACGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTcc               >  2:484605/1‑151 (MQ=255)

                                                                                                                                          aaCGCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTCCATGGCGgtg      >  2:622881/1‑151 (MQ=255)

                                                                                                                                             gCCGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTCCATGGCGgtgt     >  1:340889/1‑149 (MQ=255)

                                                                                                                                              ccGGCTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTCCATGGCGGTGGAGc  >  2:801080/1‑151 (MQ=255)

TTTAATACGGATAAGTGAAACAACGCCCAGGTAGTTGTCGAACCATGAGTCGATAATTAGTGCCTGCAACGGGCCTTCCGGATCGCCTTCCGGCGGCGGAATGTCGCGCACCAGACGTTCGAGAACGTCCTGCACACCAACGCCGGTTTTCGCTGAACAGCGCACCGCGTCGGTGGCGTCGATGCCGACGATATCTTCAATTTCTTCCGCCACGCGTTCAGGATCGGCTGCCGGCAGGTCAATCTTGTTCAGTACCGGCACAACTTCGAGATCCATTTCCATGGCGGTGTAGC  >  NC_000913/2706486‑2706778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A