Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
300 |
54.7 |
1718999 |
98.4% |
1691495 |
149.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,747,358 |
T→C |
K146K (AAA→AAG) |
ffh ← |
Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,747,358 | 0 | T | C | 98.4%
| 228.4
/ ‑4.3
| 62 | K146K (AAA→AAG) | ffh | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (29/32); total (30/32) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
AGACGACCAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGTTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGG > NC_000913/2747212‑2747501
|
aGACGACCAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGa < 2:775217/151‑1 (MQ=255)
gacCAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTgc < 1:655404/151‑1 (MQ=255)
gacCAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTgc > 1:417066/1‑151 (MQ=255)
ccAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTgccg < 1:495401/151‑1 (MQ=255)
cAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTgccgc > 2:391715/1‑151 (MQ=255)
aGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTgccgcc > 2:276968/1‑151 (MQ=255)
gCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGccgccg < 2:420533/151‑1 (MQ=255)
cGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCgg < 1:438451/151‑1 (MQ=255)
gTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGc < 1:827465/151‑1 (MQ=255)
gcagcaCGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTc < 1:276943/151‑1 (MQ=255)
cagcaCGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCg < 1:622153/151‑1 (MQ=255)
gcaCGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACCTCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGc > 1:787247/1‑151 (MQ=255)
aCGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAg < 2:313477/151‑1 (MQ=255)
cgtcgtAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGc > 2:88566/1‑148 (MQ=255)
gtcgtAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGaa < 1:17403/151‑1 (MQ=255)
gtcgtAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGa > 1:481865/1‑150 (MQ=255)
tAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAacc > 1:584110/1‑150 (MQ=255)
aTTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAaccacc > 2:624298/1‑149 (MQ=255)
tCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCa < 2:47283/150‑1 (MQ=255)
cAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACt > 1:370950/1‑151 (MQ=255)
aGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACtt > 1:748504/1‑151 (MQ=255)
ttGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTttct > 1:833085/1‑151 (MQ=255)
ggCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTttcttc > 2:9233/1‑151 (MQ=255)
cttTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTtgtg > 2:778305/1‑151 (MQ=255)
ttCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTtgtg < 2:807580/149‑1 (MQ=255)
ttCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTtgt < 2:334411/148‑1 (MQ=255)
cAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCtt < 2:510366/150‑1 (MQ=255)
cAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTtc > 1:30155/1‑151 (MQ=255)
gccgcGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTcgc > 1:145796/1‑151 (MQ=255)
ccgcGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTcgcg > 1:406952/1‑151 (MQ=255)
cgTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAg < 2:758801/151‑1 (MQ=255)
gTTAACGATATCTACCGGCTTCTGACCAACATCAGGAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCa > 2:719109/1‑149 (MQ=255)
gTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAgg > 1:834505/1‑151 (MQ=255)
gTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAgg < 1:337229/151‑1 (MQ=255)
gTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAgg < 1:756196/151‑1 (MQ=255)
aCGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACt > 1:399421/1‑151 (MQ=255)
cGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGaa < 1:723481/148‑1 (MQ=255)
tCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCg > 1:77624/1‑150 (MQ=255)
aCCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGtt < 1:391683/151‑1 (MQ=255)
ggCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTAc > 1:824990/1‑151 (MQ=255)
gACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCt > 2:402469/1‑151 (MQ=255)
cAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGgt < 2:240248/151‑1 (MQ=255)
cAACATCAGAAGGGAAGAAAGCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGAAACTTACCGAGTTTACCAACGCTGgt < 1:454441/151‑1 (MQ=255)
cATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGgttgt < 1:535617/151‑1 (MQ=255)
cATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGgttgt > 2:478904/1‑151 (MQ=255)
tCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGttt > 1:551797/1‑151 (MQ=255)
aGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGtttt > 1:843471/1‑150 (MQ=255)
aaGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTAcc < 1:572834/151‑1 (MQ=255)
aGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCg < 2:698642/151‑1 (MQ=255)
gaagaaATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCa < 2:4058/151‑1 (MQ=255)
aaTCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTg < 1:475708/151‑1 (MQ=255)
tCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGc > 2:139158/1‑150 (MQ=255)
gCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTa < 2:758690/148‑1 (MQ=255)
gCCAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACg < 2:821756/150‑1 (MQ=255)
ccAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGAc < 2:839163/151‑1 (MQ=255)
cAGCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGAcc < 2:469643/151‑1 (MQ=255)
gCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGc > 2:514162/1‑151 (MQ=255)
gCGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGc > 1:530231/1‑151 (MQ=255)
cGTCTCAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCa < 2:145819/151‑1 (MQ=255)
cAAGCTGTTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCgg > 2:671901/1‑151 (MQ=255)
cAAGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCgg < 1:277555/151‑1 (MQ=255)
aaGCTGCTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCgg > 1:5322/1‑150 (MQ=255)
|
AGACGACCAGCGGTATCCACCAGCAGCACGTCGTAGAATTTCAGTTTGGCTTCTTTCAGCGCCGCGTTAACGATATCTACCGGCTTCTGACCAACATCAGAAGGGAAGAAATCAACGCCCACCTGCTCTGCCAGCGTCTCAAGCTGTTTGATTGCCGCCGGGCGATAAACGTCGGCAGAAACCACCAGCACTTTCTTCTTGTGCTTCTCGCGCAGGAACTTACCGAGTTTACCAACGCTGGTTGTTTTACCGGCACCTTGCAGGCCCGCCATCAGTACGACCGCAGGCGG > NC_000913/2747212‑2747501
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
