Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
300 |
54.7 |
1718999 |
98.4% |
1691495 |
149.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,236,954 |
G→A |
A139T (GCC→ACC) |
ygjQ → |
DUF218 superfamily protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,236,954 | 0 | G | A | 98.4%
| 241.8
/ NA
| 64 | A139T (GCC→ACC) | ygjQ | DUF218 superfamily protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (36/27); minor base C (0/1); total (36/28) |
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATGGCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTGCCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTC > NC_000913/3236809‑3237101
|
aTGGCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCaaa < 1:212326/151‑1 (MQ=255)
ggCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCaaaa > 2:246814/1‑150 (MQ=255)
ggCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCaaaa < 2:402290/150‑1 (MQ=255)
gctgctGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCaaaa > 2:463814/1‑149 (MQ=255)
gctgctGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAg < 1:51977/151‑1 (MQ=255)
ggTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGttt < 1:628380/149‑1 (MQ=255)
tAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTgg > 2:215257/1‑151 (MQ=255)
aGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTg > 2:255129/1‑151 (MQ=255)
gCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGaaaa < 2:399242/151‑1 (MQ=255)
aTAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAAcc > 1:141139/1‑150 (MQ=255)
aCGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCatat < 1:399593/151‑1 (MQ=255)
gTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCAt > 1:386235/1‑151 (MQ=255)
aaaaaTTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCAtt < 2:56522/150‑1 (MQ=255)
aaaTTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTAtc < 2:666762/151‑1 (MQ=255)
ttACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTAt > 1:547467/1‑147 (MQ=255)
ttACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTAt < 2:547504/147‑1 (MQ=255)
ttACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCg > 1:671876/1‑151 (MQ=255)
tACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCg < 2:506859/150‑1 (MQ=255)
tACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCg < 1:451166/150‑1 (MQ=255)
cGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATACCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCTCCATTATCTCGCaa < 1:452176/151‑1 (MQ=255)
gATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCa > 1:504160/1‑149 (MQ=255)
aGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAAttt > 2:647249/1‑151 (MQ=255)
aGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAAttt < 1:212439/151‑1 (MQ=255)
aGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAAttt < 1:404821/151‑1 (MQ=255)
aTCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCAt > 2:236761/1‑151 (MQ=255)
cAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATaa < 1:806015/151‑1 (MQ=255)
aGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATaa < 1:263802/150‑1 (MQ=255)
gTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATc > 1:70987/1‑150 (MQ=255)
aTGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAAc > 2:426966/1‑151 (MQ=255)
cTTTGATCGCTAAAGGCGTGCCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctg > 1:292482/1‑151 (MQ=255)
tttGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctgg > 2:295205/1‑151 (MQ=255)
ttGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctgg < 2:302429/150‑1 (MQ=255)
tGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctggct > 2:824899/1‑151 (MQ=255)
tGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctggct > 2:654021/1‑151 (MQ=255)
gATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctggctg > 1:81186/1‑151 (MQ=255)
gATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATctggctg < 1:286730/151‑1 (MQ=255)
gTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACg > 2:464333/1‑151 (MQ=255)
gTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACg < 2:502778/151‑1 (MQ=255)
gTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACg > 2:175398/1‑151 (MQ=255)
aCCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACgg < 1:477761/150‑1 (MQ=255)
aCCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGc > 2:137140/1‑151 (MQ=255)
aCCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGc > 2:402690/1‑151 (MQ=255)
cAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTa < 2:349949/96‑1 (MQ=255)
cAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTa > 1:349926/1‑96 (MQ=255)
cAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCAt > 2:40378/1‑151 (MQ=255)
aaaGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACg > 1:556547/1‑151 (MQ=255)
tGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTAt > 1:539698/1‑151 (MQ=255)
tctGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATc < 1:70950/146‑1 (MQ=255)
gCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTa > 1:426811/1‑150 (MQ=255)
cGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAAc > 2:466658/1‑151 (MQ=255)
tATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACgcgc > 2:827604/1‑151 (MQ=255)
aTGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAAcgcg < 2:810455/149‑1 (MQ=255)
ggATTCTCAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGAcc > 2:417827/1‑151 (MQ=255)
tctcAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCa > 2:412137/1‑150 (MQ=255)
tctcAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCa > 2:362115/1‑150 (MQ=255)
ctcAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAat > 2:138138/1‑151 (MQ=255)
cAACGCTGGATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAatat > 2:367793/1‑151 (MQ=255)
actcTGGATGCGTTTGTTCGTCTCAAAAAGGTTTTTGGTGAAAACCATACCACCATTATCACGCAAGAATTTCATAATCAACGGGCCAACTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCaa < 1:704963/143‑1 (MQ=255)
ggATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAATCAc < 1:8066/151‑1 (MQ=255)
ggATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCa < 2:728333/150‑1 (MQ=255)
gATTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACg < 1:466622/151‑1 (MQ=255)
aTTCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACgg > 1:326585/1‑151 (MQ=255)
tCGGTAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGt < 2:372057/150‑1 (MQ=255)
tAGTGCGTACCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGttttt > 1:669949/1‑150 (MQ=255)
gtgcgtacCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTtat > 2:371906/1‑150 (MQ=255)
cgtacCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTc > 1:535025/1‑151 (MQ=255)
|
ATGGCTGCTGGTAAGTGGCGATAACGGACGTAAAAATTACGATGAAGCATCAGGTATGCAGCAGGCTTTGATCGCTAAAGGCGTACCAGCAAAAGTGATCTTCTGCGACTATGCCGGATTCTCAACGCTGGATTCGGTAGTGCGTGCCAAAAAGGTTTTTGGTGAAAACCATATCACCATTATCTCGCAAGAATTTCATAATCAACGCGCCATCTGGCTGGCAAAACAGTACGGCATCGACGCTATCGGTTTTAACGCGCCAGACCTCAATATGAAGCACGGTTTTTATACTC > NC_000913/3236809‑3237101
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
