Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F50 I2 R1 173 150.8 4954114 96.5% 4780720 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,602,371 C→T G126E (GGG→GAG)  ftsE ← cell division ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,602,3710CT99.3% 528.4 / NA 136G126E (GGG→GAG) ftsEcell division ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (64/71);  minor base G (1/0);  total (65/71)
Fisher's exact test for biased strand distribution p-value = 4.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 136 total aligned reads displayed.

GCCTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCCCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTGGCGGCG  >  NC_000913/3602223‑3602516
                                                                                                                                                    |                                                                                                                                                 
gCCTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCg                                                                                                                                                 <  1:164057/151‑1 (MQ=255)
 ccTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGa                                                                                                                                                <  4:1430877/151‑1 (MQ=255)
 ccTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGGAGCTCg                                                                                                                                                 >  1:639462/1‑150 (MQ=255)
  cTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGAc                                                                                                                                               >  2:204103/1‑151 (MQ=255)
    tCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACt                                                                                                                                              <  4:895637/150‑1 (MQ=255)
    tCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACt                                                                                                                                              <  4:1486089/150‑1 (MQ=255)
     ccGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACttt                                                                                                                                            <  1:466665/151‑1 (MQ=255)
     ccGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACttt                                                                                                                                            <  1:506769/151‑1 (MQ=255)
       gACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTAt                                                                                                                                          <  1:751699/151‑1 (MQ=255)
       gACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTAt                                                                                                                                          >  1:1129449/1‑151 (MQ=255)
        aCAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATc                                                                                                                                         <  4:1606959/151‑1 (MQ=255)
            cgcgTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAgc                                                                                                                                     >  3:504381/1‑151 (MQ=255)
            cgcgTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAg                                                                                                                                      <  1:1666424/150‑1 (MQ=255)
             gcgTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAgcg                                                                                                                                    <  2:50021/151‑1 (MQ=255)
             gcgTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAgcg                                                                                                                                    >  4:1208811/1‑151 (MQ=255)
               gtcgtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGcgcc                                                                                                                                  >  1:1219913/1‑151 (MQ=255)
               gtcgtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGcgcc                                                                                                                                  >  4:1827485/1‑151 (MQ=255)
               gtcgtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGcgcc                                                                                                                                  >  1:772129/1‑151 (MQ=255)
                 cgtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGcgccgc                                                                                                                                <  4:763946/151‑1 (MQ=255)
                  gtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCgccgcc                                                                                                                               >  4:881281/1‑151 (MQ=255)
                  gtcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCgccgcc                                                                                                                               >  1:1882761/1‑151 (MQ=255)
                   tcCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGccgccg                                                                                                                              >  1:1417474/1‑151 (MQ=255)
                    ccAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGccgccg                                                                                                                              <  2:145847/150‑1 (MQ=255)
                     cAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGac                                                                                                                            <  4:442868/151‑1 (MQ=255)
                      aGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGaca                                                                                                                           <  1:613563/151‑1 (MQ=255)
                       ggTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGaca                                                                                                                           >  3:156748/1‑150 (MQ=255)
                          tACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCg                                                                                                                       >  3:373160/1‑151 (MQ=255)
                          tACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCg                                                                                                                       >  4:1704350/1‑151 (MQ=255)
                                 cGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGcgacga                                                                                                                <  2:442685/151‑1 (MQ=255)
                                 cGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGcgacg                                                                                                                 >  3:429442/1‑150 (MQ=255)
                                  ggTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGaa                                                                                                               <  4:1312182/151‑1 (MQ=255)
                                   gTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAat                                                                                                              <  4:1535044/151‑1 (MQ=255)
                                      cGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAatat                                                                                                            <  1:1086161/150‑1 (MQ=255)
                                       gTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCg                                                                                                          >  4:583150/1‑151 (MQ=255)
                                        tCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGt                                                                                                         >  1:1556068/1‑151 (MQ=255)
                                         ccGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTc                                                                                                        >  4:947817/1‑151 (MQ=255)
                                         ccGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTc                                                                                                        >  4:75632/1‑151 (MQ=255)
                                          cGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCa                                                                                                       <  4:1220430/151‑1 (MQ=255)
                                                 agTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTgg                                                                                                >  2:79523/1‑151 (MQ=255)
                                                  gTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGc                                                                                               >  4:1315333/1‑151 (MQ=255)
                                                    aCCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCa                                                                                              <  1:266241/150‑1 (MQ=255)
                                                      cgcgGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCg                                                                                           <  1:672307/151‑1 (MQ=255)
                                                       gcgGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCgg                                                                                          >  3:242779/1‑151 (MQ=255)
                                                       gcgGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCgg                                                                                          >  2:508605/1‑151 (MQ=255)
                                                               gTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAAt                                                                                   <  4:1717465/150‑1 (MQ=255)
                                                                 tCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATc                                                                                  >  4:139393/1‑149 (MQ=255)
                                                                 tCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCa                                                                                 <  4:149098/150‑1 (MQ=255)
                                                                     caccGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCggg                                                                            >  4:1650016/1‑151 (MQ=255)
                                                                      accGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCggg                                                                            >  1:476700/1‑150 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  1:333877/151‑1 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  1:1925566/151‑1 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  1:861897/151‑1 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  3:204096/151‑1 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  1:1714493/151‑1 (MQ=255)
                                                                        cgcgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATc                                                                         <  1:920072/151‑1 (MQ=255)
                                                                          cgcgGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGc                                                                       >  1:384284/1‑151 (MQ=255)
                                                                             gggCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCAc                                                                    >  1:894262/1‑151 (MQ=255)
                                                                             gggCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAACATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCAc                                                                    >  3:333789/1‑151 (MQ=255)
                                                                               gCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGt                                                                  <  1:1197898/151‑1 (MQ=255)
                                                                               gCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGt                                                                  >  2:119371/1‑151 (MQ=255)
                                                                                cAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGtt                                                                 <  1:1486358/151‑1 (MQ=255)
                                                                                 aaTGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGtt                                                                 >  1:59041/1‑150 (MQ=255)
                                                                                 aaTGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGtt                                                                 >  4:306979/1‑150 (MQ=255)
                                                                                 aaTGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGtt                                                                 >  1:239706/1‑150 (MQ=255)
                                                                                 aaTGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGt                                                                  >  4:1638118/1‑149 (MQ=255)
                                                                                     ccAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGt                                                            <  3:515517/151‑1 (MQ=255)
                                                                                      cAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTa                                                           <  2:291224/151‑1 (MQ=255)
                                                                                           cGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACa                                                       <  1:396236/150‑1 (MQ=255)
                                                                                            gCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGt                                                     >  4:567452/1‑151 (MQ=255)
                                                                                             cTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGt                                                     >  4:1285575/1‑150 (MQ=255)
                                                                                               gttgttCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTa                                                    <  1:1739907/149‑1 (MQ=255)
                                                                                                  gttCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTc                                               <  4:1145932/151‑1 (MQ=255)
                                                                                                    tCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTcc                                              >  1:370710/1‑150 (MQ=255)
                                                                                                         gCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAg                                         >  1:860019/1‑150 (MQ=255)
                                                                                                          cccGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTa                                       <  1:683286/151‑1 (MQ=255)
                                                                                                           ccGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGt                                        >  4:362504/1‑149 (MQ=255)
                                                                                                             gAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGt                                        <  1:1857000/147‑1 (MQ=255)
                                                                                                             gAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGAt                                    <  2:450161/151‑1 (MQ=255)
                                                                                                               aaGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATgg                                  <  4:1073523/151‑1 (MQ=255)
                                                                                                                aGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGt                                 <  1:297775/151‑1 (MQ=255)
                                                                                                                  cTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTg                                <  1:1761552/150‑1 (MQ=255)
                                                                                                                    gAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGa                               <  1:1332356/149‑1 (MQ=255)
                                                                                                                    gAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGAt                              <  2:218761/150‑1 (MQ=255)
                                                                                                                    gAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGAt                              >  4:1393840/1‑150 (MQ=255)
                                                                                                                        aGGGAAGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTgg                         <  1:1694132/151‑1 (MQ=255)
                                                                                                                            aaGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGaaaa                     <  3:200859/151‑1 (MQ=255)
                                                                                                                            aaGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGaaa                      >  4:1149057/1‑150 (MQ=255)
                                                                                                                            aaGTTCTTCGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGaaa                      >  1:1035741/1‑150 (MQ=255)
                                                                                                                                tcttcGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCa                  <  2:333799/150‑1 (MQ=255)
                                                                                                                                 cttcGCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCAt                 >  1:769148/1‑150 (MQ=255)
                                                                                                                                     gCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCaa            <  1:146558/151‑1 (MQ=255)
                                                                                                                                     gCTTTGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCa             >  4:385034/1‑150 (MQ=255)
                                                                                                                                        ttGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAAt           <  2:373171/149‑1 (MQ=255)
                                                                                                                                        ttGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCt         >  1:159896/1‑151 (MQ=255)
                                                                                                                                         tGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCt         <  3:538160/150‑1 (MQ=255)
                                                                                                                                         tGTCCAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCt         <  3:41779/150‑1 (MQ=255)
                                                                                                                                             cAGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTggcgg    <  4:288885/151‑1 (MQ=255)
                                                                                                                                              aGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTggcggc   >  4:607633/1‑151 (MQ=255)
                                                                                                                                              aGTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTggcggc   <  3:136930/151‑1 (MQ=255)
                                                                                                                                               gTAGCTCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTGgcggcg  <  1:41789/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GCCTTCCGACAGCGCGTCGTCCAGGTTACCAGTCGGTTCGTCCGCCAGCAGTACCGCGGGCTTGTTCACCACCGCGCGGGCAATGCCAACACGCTGTTGTTCACCGCCCGAAAGCTGAATAGGGAAGTTCTTCGCTTTGTCCAGTAGCCCGACTTTATCCAGCGCCGCCGACACCCGGCGACGAATATCGTCACCGCTGGCACCGGCGATAATCAGCGGGATCGCCACGTTATCGTAGACAGTACGGTCCATCAGTAGATGGTGATCCTGGAAAATCATGCCAATCTGGCGGCG  >  NC_000913/3602223‑3602516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A