Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,493,603 |
T→C |
G268G (GGA→GGG) |
idnD ← |
L‑idonate 5‑dehydrogenase, NAD‑binding |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,493,603 | 0 | T | C | 99.3%
| 504.6
/ ‑4.5
| 139 | G268G (GGA→GGG) | idnD | L‑idonate 5‑dehydrogenase, NAD‑binding |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (62/76); total (63/76) |
| Fisher's exact test for biased strand distribution p-value = 4.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01 |
Only 100 of 140 total aligned reads displayed.
ATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCTCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTGGGTTT > NC_000913/4493455‑4493750
|
atTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCcccc > 1:474176/1‑151 (MQ=255)
cAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAt < 1:1681687/151‑1 (MQ=255)
aGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAt > 4:1285661/1‑150 (MQ=255)
aGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAt > 4:1397790/1‑150 (MQ=255)
aCTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAtacct < 4:1175747/151‑1 (MQ=255)
cAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAtacctacc > 4:491825/1‑151 (MQ=255)
aGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCAtacctacc < 3:82215/150‑1 (MQ=255)
aGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATacctacct < 1:1189161/151‑1 (MQ=255)
gTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTg < 1:1648645/151‑1 (MQ=255)
aaaGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCa < 1:594435/151‑1 (MQ=255)
aaaGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCa < 3:218758/151‑1 (MQ=255)
aaGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCAc > 1:1616664/1‑151 (MQ=255)
cAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCAtt < 4:1684869/151‑1 (MQ=255)
gTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAc > 3:214716/1‑151 (MQ=255)
tgtaTTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcg > 3:347576/4‑151 (MQ=255)
gATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAGATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgcc < 4:1034915/151‑1 (MQ=255)
gATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGGGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgac > 2:118294/1‑149 (MQ=255)
aTTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgccg > 1:976729/1‑151 (MQ=255)
aTTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgccg > 1:903134/1‑151 (MQ=255)
ttGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgccgc > 4:1474314/1‑151 (MQ=255)
tGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTAcgccgc < 1:1735727/150‑1 (MQ=255)
gATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCcgcg < 3:482708/150‑1 (MQ=255)
aTAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTg < 4:76313/151‑1 (MQ=255)
aTAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTg > 4:1171126/1‑151 (MQ=255)
aaCGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGc > 2:309053/1‑150 (MQ=255)
aaCGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGc < 1:557059/150‑1 (MQ=255)
cGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACg < 4:187603/151‑1 (MQ=255)
ccATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACg > 1:1408425/1‑149 (MQ=255)
aTTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTg > 4:1563558/1‑151 (MQ=255)
tCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGAc > 4:53715/1‑151 (MQ=255)
cGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGAcc > 4:1369911/1‑151 (MQ=255)
gccagccaTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCt > 4:30574/1‑151 (MQ=255)
ccagccaTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTc < 4:799784/151‑1 (MQ=255)
cagccaTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTcc > 1:864056/1‑151 (MQ=255)
agccaTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCGCGAGTGACCTc > 1:1016532/1‑149 (MQ=255)
gccaTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAg < 2:377963/151‑1 (MQ=255)
caTGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGAc < 4:1076938/151‑1 (MQ=255)
gACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAgg < 4:714974/151‑1 (MQ=255)
gACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAg < 2:68457/150‑1 (MQ=255)
agTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACt > 4:1824187/2‑151 (MQ=255)
aTTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACtgat < 1:1264947/151‑1 (MQ=255)
aTTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACtga < 1:1394737/150‑1 (MQ=255)
aTTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACtga < 1:656333/150‑1 (MQ=255)
aaTTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACtgatga > 4:1143489/1‑149 (MQ=255)
aTTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTGCCTGCACCATTACGCCGCGTGCAAGAGTGACCTCCAGACAGGTATTCACTGATGAAgg < 1:1780172/151‑1 (MQ=255)
cGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGAt < 2:65484/150‑1 (MQ=255)
cGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGAt < 4:1740619/150‑1 (MQ=255)
cGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATg < 1:307856/151‑1 (MQ=255)
cGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCCTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGa < 1:171659/149‑1 (MQ=255)
tAAAACGGAAAGAGCCTCTGAGTGAAATCCCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCgg > 1:794763/1‑150 (MQ=255)
aaaCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGaca < 3:51137/151‑1 (MQ=255)
aaaCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGac > 2:474541/1‑150 (MQ=255)
aaCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCATCGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGacac > 4:241537/1‑151 (MQ=255)
aaCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGacac > 1:1492430/1‑151 (MQ=255)
aCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACt < 3:35840/151‑1 (MQ=255)
aCGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACt < 2:111107/151‑1 (MQ=255)
cGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACtt < 4:694398/151‑1 (MQ=255)
gAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTc > 1:1875477/1‑150 (MQ=255)
gAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTc > 4:917633/1‑150 (MQ=255)
aaaGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCaa < 2:450404/151‑1 (MQ=255)
aaGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCTCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCaa > 4:449769/1‑150 (MQ=255)
aaGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCaaa < 1:208419/151‑1 (MQ=255)
aaGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCaaa < 4:1614022/151‑1 (MQ=255)
aaGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCaa > 4:1480826/1‑150 (MQ=255)
aaGAGCCTCTGAGTGAAATCACCTTACCAATCAACGTCAGCATTGGGAATTCTCCCATCGCGCCCCCCATACCGACCTAGACCGTTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGAGCGGCCACTTCaa < 1:342349/150‑1 (MQ=255)
ctctGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGAc > 1:1907630/1‑151 (MQ=255)
tctGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGAc > 4:1669454/1‑150 (MQ=255)
gAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACAt < 4:343457/149‑1 (MQ=255)
gAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAAt < 4:1662668/151‑1 (MQ=255)
gAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAAt < 4:986009/151‑1 (MQ=255)
gAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAAt < 1:972465/151‑1 (MQ=255)
aaaTCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATa < 2:306858/151‑1 (MQ=255)
tctcCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCGATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGaa < 3:465216/145‑1 (MQ=255)
tctcCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCGATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGaa > 2:465232/1‑145 (MQ=255)
ccTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCtt < 4:1135522/150‑1 (MQ=255)
tACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCttttt < 1:1642730/150‑1 (MQ=255)
aCCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTcc > 4:1097356/1‑151 (MQ=255)
ccAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTcc < 1:112776/150‑1 (MQ=255)
ccAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTcc < 1:525587/150‑1 (MQ=255)
cAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGc > 1:104421/1‑151 (MQ=255)
aaTCAACGTCATCATTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCt < 1:1480853/151‑1 (MQ=255)
tcatcaTTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTg > 4:61991/1‑151 (MQ=255)
catTGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATcc < 2:38564/151‑1 (MQ=255)
tGGGAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCAt > 4:1851427/1‑150 (MQ=255)
ggAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtc < 1:1820616/151‑1 (MQ=255)
ggAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtc > 1:1149014/1‑151 (MQ=255)
ggAATTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtc > 4:7739/1‑151 (MQ=255)
aTTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtcgtc < 1:425027/151‑1 (MQ=255)
aTTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtcgtc < 4:474351/151‑1 (MQ=255)
aTTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtcgtc > 3:215434/1‑151 (MQ=255)
aTTCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATgtcgtc < 4:807828/151‑1 (MQ=255)
ttCTGCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGtcgtcg > 4:819066/1‑151 (MQ=255)
gCCATCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGtt < 1:1045814/149‑1 (MQ=255)
tCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTgg > 4:1156404/1‑151 (MQ=255)
tCGCGCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTgg > 1:688154/1‑151 (MQ=255)
cgcgCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTggg < 4:1016974/151‑1 (MQ=255)
cgcgCCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTgg < 1:498895/150‑1 (MQ=255)
gcCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTGGGttt > 1:1111784/1‑151 (MQ=255)
gcCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTGGGttt < 4:72620/151‑1 (MQ=255)
gcCCCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTGGGttt > 2:16480/1‑151 (MQ=255)
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ATTCAGCACTCAGTAAAGGCAGTGGATTGATAACGCCATTCGCCAGCCATGACACTGCGGTATTAAATTCGCTGGTAAAACGGAAAGAGCCTCTGAGTGAAATCTCCTTACCAATCAACGTCATCATTGGGAATTCTGCCATCGCGCCTCCCATACCTACCTGCACCATTACGCCGCGTGCACGAGTGACCTCCAGACAGGTATTCACTGATGAAGGATGACCGGACACTTCAAAGCTGACATCGAAATAGCCTTTTTCCGCTTTCCAGTGATCCATGTCGTCGTTTTGTGGGTTT > NC_000913/4493455‑4493750
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
