Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,500,977 |
A→G |
intergenic (‑186/‑283) |
yjgX ← / → yjgZ |
pseudogene fragment/uncharacterized protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,500,977 | 0 | A | G | 100.0%
| 554.9
/ NA
| 154 | intergenic (‑186/‑283) | yjgX/yjgZ | pseudogene fragment/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/61); total (93/61) |
Only 100 of 154 total aligned reads displayed.
CCGGTTCTAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCACCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTCCCGGTCAT > NC_000913/4500829‑4501122
|
ccGGTTCTAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGcc < 2:317091/151‑1 (MQ=255)
ggTTCTAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGcccc > 1:1415284/1‑151 (MQ=255)
tCTAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTc > 4:1701388/1‑151 (MQ=255)
tAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTcgc > 4:1330390/1‑151 (MQ=255)
aGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTcgcg > 2:525856/1‑151 (MQ=255)
aGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTcgcg > 1:1540830/1‑151 (MQ=255)
aGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTc < 4:1495979/148‑1 (MQ=255)
gTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCgt < 1:146756/151‑1 (MQ=255)
tgAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCgttgtt > 1:1206982/1‑151 (MQ=255)
gAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCgttgtt < 4:1892366/150‑1 (MQ=255)
gAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGttgttg < 4:1238621/151‑1 (MQ=255)
ggCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCAcc < 2:484316/151‑1 (MQ=255)
gCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCAccc > 4:621213/1‑151 (MQ=255)
cGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGgaca < 4:447255/151‑1 (MQ=255)
gCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGgacag < 4:92123/151‑1 (MQ=255)
gggCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGgacagaca < 1:100766/151‑1 (MQ=255)
tctTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGt > 2:223301/1‑151 (MQ=255)
ctTCCTGCGTGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGtt > 1:1926907/1‑151 (MQ=255)
tCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACGCCGt < 1:241916/148‑1 (MQ=255)
tCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGtt < 4:226493/149‑1 (MQ=255)
tCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGtt < 4:1023118/149‑1 (MQ=255)
tCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGtt < 1:601097/149‑1 (MQ=255)
ccTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGt < 1:1716145/147‑1 (MQ=255)
ccTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTAt < 3:227474/150‑1 (MQ=255)
tGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATgg > 1:453353/1‑150 (MQ=255)
gCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATgg < 1:514185/149‑1 (MQ=255)
gCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGa < 4:1224670/150‑1 (MQ=255)
gCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGAc > 4:886171/1‑151 (MQ=255)
cATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGAc > 1:339111/1‑150 (MQ=255)
cATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACt < 1:1232267/151‑1 (MQ=255)
gTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTtct > 4:1049287/1‑151 (MQ=255)
ttACACTTGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTtctc > 4:228646/1‑151 (MQ=255)
cacTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCttg > 1:430463/1‑151 (MQ=255)
cacTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCttg > 4:1586976/1‑151 (MQ=255)
cacTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCtt < 4:1292927/150‑1 (MQ=255)
cTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCttgtt > 1:1750300/1‑151 (MQ=255)
tGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCttgttg > 1:931463/1‑151 (MQ=255)
tGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCttgttg > 1:1461620/1‑151 (MQ=255)
aCTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcg > 2:349008/1‑151 (MQ=255)
tGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcga > 1:477030/1‑150 (MQ=255)
gCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatc < 3:317612/151‑1 (MQ=255)
gCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatc < 4:342934/151‑1 (MQ=255)
gCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgat < 1:192730/150‑1 (MQ=255)
gCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCACCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcga < 1:99155/149‑1 (MQ=255)
cAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatcg > 1:740652/1‑151 (MQ=255)
cAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatcg > 1:1073713/1‑151 (MQ=255)
aaGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatcg > 1:1111014/1‑150 (MQ=255)
aaGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatcg > 1:1887119/1‑150 (MQ=255)
agagGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCAcgatcgat < 1:779751/151‑1 (MQ=255)
gagGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACgatcgatc > 2:250253/1‑151 (MQ=255)
agGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACgatcgatc > 2:273186/1‑150 (MQ=255)
gCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGt < 2:173835/151‑1 (MQ=255)
ccTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGtt > 3:370616/1‑151 (MQ=255)
ttCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTat > 1:1370194/1‑151 (MQ=255)
tCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTatg > 1:740191/1‑151 (MQ=255)
tCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTatg > 1:643935/1‑151 (MQ=255)
tCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTa < 3:345481/149‑1 (MQ=255)
ctcctcTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTatgcat > 2:485555/1‑151 (MQ=255)
cctcTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTatgcatg < 3:241211/150‑1 (MQ=255)
tctGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTg > 1:520166/1‑151 (MQ=255)
ctGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTg > 4:758769/1‑150 (MQ=255)
tGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGac > 1:298453/1‑151 (MQ=255)
aCATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGacac > 3:169620/1‑151 (MQ=255)
cATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGAcacc < 4:613450/151‑1 (MQ=255)
ttACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGAcaccac > 4:1608941/1‑151 (MQ=255)
aCTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATCCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACcaca > 4:1485537/1‑150 (MQ=255)
cTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAAc > 4:880781/1‑151 (MQ=255)
tCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAAcc > 4:1037938/1‑151 (MQ=255)
cAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAAccc < 1:145450/151‑1 (MQ=255)
aGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAAcccc > 4:1180294/1‑151 (MQ=255)
aGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAAcccc > 3:114267/1‑151 (MQ=255)
tttCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTg < 4:542531/150‑1 (MQ=255)
ttCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTggg > 4:142255/1‑151 (MQ=255)
ttCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTggg > 4:1065677/1‑151 (MQ=255)
tCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTggg < 4:1194836/150‑1 (MQ=255)
tCACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGt > 2:195610/1‑151 (MQ=255)
cACTACTACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGt > 2:307567/1‑150 (MQ=255)
actactACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTAt > 4:721567/1‑151 (MQ=255)
actactACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTAt < 4:734960/151‑1 (MQ=255)
actactACACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTAt < 2:169627/151‑1 (MQ=255)
tactacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATg > 4:1671343/1‑150 (MQ=255)
tactacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATg > 4:1842510/1‑150 (MQ=255)
tactacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATg > 3:69229/1‑150 (MQ=255)
actacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATg < 1:991969/149‑1 (MQ=255)
actacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGa < 1:1309527/150‑1 (MQ=255)
ctacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGAcc > 1:678222/1‑151 (MQ=255)
tacACCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCg > 4:338851/1‑151 (MQ=255)
cacCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGAt < 4:861890/151‑1 (MQ=255)
acCCCTTCTGCCATCCATAACAAGCGAGTCGCACCCTCGCGAGGCGTTGTTGCACGTCACCCGCACAGCCACCGTTATGGACTTCTCTTGTTGCACGATCGCTCAATTGTTATGCATACTGACACCCCAACCCCGGTGGGTATAACCGa > 3:115583/1‑149 (MQ=255)
acCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATg > 1:574215/1‑151 (MQ=255)
acCCCATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATg > 1:406602/1‑151 (MQ=255)
ccccATCTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATg < 1:167362/150‑1 (MQ=255)
cTGCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTtct > 1:901468/1‑151 (MQ=255)
gCCATCCATAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTtctc < 3:253492/150‑1 (MQ=255)
ccatAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCActctc > 2:520805/1‑151 (MQ=255)
catAACAACCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCActctct < 1:1032612/151‑1 (MQ=255)
acaacCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTccc > 1:1915239/1‑151 (MQ=255)
acCGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTCCCGGt > 4:1074047/1‑151 (MQ=255)
cGATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTCCCGGTc > 4:488238/1‑150 (MQ=255)
gATTCGCCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTCCCGGTCAt > 1:1388824/1‑151 (MQ=255)
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CCGGTTCTAGCGGGGTTGTGAGGCTGATGGCAATCGCCGGGCTCTTCCTGCATGTTACACTGGTACTGCAAGAGGGGGCCTTCGCTCCTCTGACATTACTCAGTATTTTCACTACTACACCCCATCTGCCATCCATAACAACCGATTCACCCCCTCGCGAGGCGTTGTTGCCCGTCACCCGGACAGACACCGTTATGGACTTCTCTTGTTGCACGATCGATCAATTGTTATGCATGCTGACACCACAACCCCGGTGGGTATGACCGATGCCTTTCTCACTCTCTTCCCGGTCAT > NC_000913/4500829‑4501122
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
