Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I1 R1
|
157 |
93.7 |
2947622 |
98.1% |
2891617 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,053,637 |
T→C |
I402V (ATC→GTC) |
pepP ← |
proline aminopeptidase P II |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,053,637 | 0 | T | C | 97.8%
| 299.9
/ ‑3.8
| 92 | I402V (ATC→GTC) | pepP | proline aminopeptidase P II |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (52/38); total (53/39) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCTAAG > NC_000913/3053490‑3053784
|
aTGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACAcc > 2:1215693/1‑151 (MQ=255)
gccgccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACcgc < 1:1192081/151‑1 (MQ=255)
gccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGat < 1:706072/151‑1 (MQ=255)
gccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGat > 2:1120729/1‑151 (MQ=255)
ccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGata < 1:505748/151‑1 (MQ=255)
ccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGat > 2:7515/1‑150 (MQ=255)
ccACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGat > 2:796094/1‑150 (MQ=255)
cACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGatat > 2:1060323/1‑151 (MQ=255)
aCCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGGGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATAtt > 1:1422021/1‑151 (MQ=255)
ccGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTg < 2:853669/151‑1 (MQ=255)
ccGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTg < 2:1061082/151‑1 (MQ=255)
cgacgaTGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGt < 2:1119495/151‑1 (MQ=255)
gatgatTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTg < 1:1236955/151‑1 (MQ=255)
gatgatTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTg < 2:624635/151‑1 (MQ=255)
gatTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTgg > 2:108518/1‑149 (MQ=255)
gatTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGc > 1:959773/1‑150 (MQ=255)
ttACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGGATGCCGACACCGCGATATTGTTCttg > 2:1094675/1‑145 (MQ=255)
tACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACt < 1:1128397/150‑1 (MQ=255)
tACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACtt > 1:81738/1‑151 (MQ=255)
cGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCt < 2:904303/151‑1 (MQ=255)
gCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTg < 2:775590/151‑1 (MQ=255)
cATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTAACGGTTTCGGTAATTACAATGTCGTTTTCAATACGAATGCCCACACCGCGATATTGTTCTGGCACTTCTGc > 1:1455397/1‑149 (MQ=255)
aTTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGTCGACACCGCGATATTGTTTTGGCACTTCTGCATc > 1:1085545/1‑151 (MQ=255)
tttCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGGTTCAGGTATTACAATTTTGTCTTTAATACGTATGCCGTCAACTCGATATTTGTTTGGCACTTCTTCATCCggtg > 1:237194/1‑149 (MQ=255)
cGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCaa > 2:1367674/1‑149 (MQ=255)
cGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCa < 2:908891/148‑1 (MQ=255)
cGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAat > 2:1090123/1‑150 (MQ=255)
gcagcaACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAatat > 2:985674/1‑151 (MQ=255)
cagcaACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAAtata < 2:602093/151‑1 (MQ=255)
cagcaACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGGCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAatat > 2:260121/1‑150 (MQ=255)
caACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACa > 2:267021/1‑150 (MQ=255)
aaCCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCCTCCGGCGCAATATACAGc > 1:1008803/1‑151 (MQ=255)
cATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCt < 1:1119389/151‑1 (MQ=255)
cATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGGTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGccc > 1:1254375/1‑150 (MQ=255)
tCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGAGAGGTTTTTTTTTCCGGTTTTGGGAATCTAAACGTCGGCGTCAATACGAATGCCGACACCGCGGTGTTGTTTTGGCACATCTCCACCCGGCGCAATATACAGCCCTg > 1:913206/1‑150 (MQ=255)
aaCGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGct > 1:199429/1‑151 (MQ=255)
gCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTa < 2:1141478/151‑1 (MQ=255)
cTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTTGTTACCGGTTTCGGGAATCAAAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATTCGGCGCAATATACAGCCCTGGCTCTa > 2:44921/1‑150 (MQ=255)
tCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACg < 2:1293680/150‑1 (MQ=255)
tCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTTCCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCCGCGCAATATACAGCCCTGGCTCTACgg > 1:622078/1‑151 (MQ=255)
cGATTTCTTCCGGCTTTTTCACCACGCTGGCGGAGAGGATTTTGTTAACGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGt > 2:564168/1‑151 (MQ=255)
aTTTCTTCCGGCTTTTTCACCACGCTGGCGGAGAGGTTTTCGTTACCGGGTTCGGTAATCACAATGTCGTCTTCAATACGAATATCGACACCGCGATATTGTTTTGGCACTTCTGCATAAGGCGCAATATAAAGGCCTTGCTTTACGGTc > 1:420981/1‑150 (MQ=255)
tttCTTCCGGCTTTTTCACCACGCTGGCGGTGGGGTTTTCGTTTCCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTATGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACgg > 2:1134274/1‑147 (MQ=255)
ttcttcCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATTTCGTCTTCAATACGAATGCCGGCCCCCCGAAATTGTTCTGGCCCTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTc > 1:1227017/1‑148 (MQ=255)
tcCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTAc < 1:1196131/149‑1 (MQ=255)
tcCGGCTTTTTCACCACGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTAc > 2:1053367/1‑149 (MQ=255)
ccGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCa < 2:1340059/150‑1 (MQ=255)
cGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATg < 2:604965/151‑1 (MQ=255)
cGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATg < 2:663057/151‑1 (MQ=255)
cGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGGTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCAt > 1:470530/1‑150 (MQ=255)
ggCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGc < 1:546124/151‑1 (MQ=255)
tttttCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCCGTACCATGccc > 1:1037845/1‑150 (MQ=255)
ttttCACCACGCTGGCGGTGAGGTTTTCGTTACCGGGTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCgg > 2:997154/1‑151 (MQ=255)
ttCACCACGCTGGCGGTGAGGTTTTCGTTACCCGGTTCGGTAATCACAATGTCGGCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGGCAGTACCATGCCCGGtt > 2:345445/1‑151 (MQ=255)
caccacGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTcc > 1:113760/1‑151 (MQ=255)
caccacGCTGGCGGTGAGGGTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGGTATTGTTCCGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTcc > 2:119054/1‑151 (MQ=255)
gCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATg < 1:626322/151‑1 (MQ=255)
tGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCgcgagcg > 2:161508/1‑151 (MQ=255)
gAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCgcgagcga < 2:1020042/151‑1 (MQ=255)
aGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGAt < 2:1037745/151‑1 (MQ=255)
gTTTTCGTTACCGGGTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATcc > 1:230042/1‑151 (MQ=255)
tttCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCt < 2:959681/150‑1 (MQ=255)
ttCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTg > 1:986124/1‑150 (MQ=255)
cGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGAcc < 1:970893/151‑1 (MQ=255)
gTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGAcc > 1:295056/1‑150 (MQ=255)
ttACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCAt > 2:1415761/1‑151 (MQ=255)
tACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCAt < 1:1157764/150‑1 (MQ=255)
cGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAac > 2:1136051/1‑151 (MQ=255)
ttCGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACAcc < 2:310161/150‑1 (MQ=255)
cGGTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCAc < 2:900019/151‑1 (MQ=255)
ggTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACg < 1:459556/151‑1 (MQ=255)
gTAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGt > 1:769402/1‑151 (MQ=255)
tAATCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTc > 1:1173949/1‑151 (MQ=255)
aaTCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCa < 1:756104/151‑1 (MQ=255)
aaTCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCa < 2:973411/151‑1 (MQ=255)
aTCACAATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCAt < 1:1062903/151‑1 (MQ=255)
cacaATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATg < 1:1060419/150‑1 (MQ=255)
caATGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGAc > 1:147835/1‑151 (MQ=255)
tGTCGTCTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCACCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTTCCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGa < 2:1455290/147‑1 (MQ=255)
gtcgtcTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATc < 2:1421914/150‑1 (MQ=255)
cgtcTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGATCATAAACACCCACGTCATGGACATcc > 1:787650/1‑149 (MQ=255)
cgtcTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATcc > 1:189840/1‑149 (MQ=255)
tcTTCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATACCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTc > 1:53629/1‑151 (MQ=255)
tCAATACGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTcc < 2:1085445/149‑1 (MQ=255)
cGAATGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGt > 2:1286265/1‑151 (MQ=255)
cGAATGCCGACACCGCGATATTGTTCTGACACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGAGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGCCCTAAcc > 2:984694/1‑148 (MQ=255)
aTGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGc > 2:444005/1‑151 (MQ=255)
tGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCt > 2:749837/1‑151 (MQ=255)
tGCCGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCt > 2:1386685/1‑151 (MQ=255)
ccGACACCGCGATATTGTTCTGACAATTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTGAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATTCAGTCCTAACCAGTGGCTa < 2:1091779/150‑1 (MQ=255)
cGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCTa > 1:1355396/1‑149 (MQ=255)
cGACACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCTAAg < 2:635846/151‑1 (MQ=255)
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ATGCCGCCACCGACGATGATTACGCTCATTGCTTTCTCGCAGCAACCATCAACGCTTCGATTTCTTCCGGCTTTTTCACCACGCTGGCGGTGAGGTTTTCGTTACCGGTTTCGGTAATCACAATGTCGTCTTCAATACGAATGCCGATACCGCGATATTGTTCTGGCACTTCTGCATCCGGCGCAATATACAGCCCTGGCTCTACGGTCAGTACCATGCCCGGTTCCAGAATGCGCGAGCGATCCTGACCATAAACACCCACGTCATGGACATCCAGTCCTAACCAGTGGCTAAG > NC_000913/3053490‑3053784
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
