Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F50 I2 R1	150	68.2	2132745	98.7%	2105019	150.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,087,671	T→C	H59R (CAC→CGC)	pgaC ←	biofilm PGA synthase PgaCD, catalytic subunit; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,087,671	0	T	C	100.0%	264.0 / NA	74	H59R (CAC→CGC)	pgaC	biofilm PGA synthase PgaCD, catalytic subunit; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (37/37); total (37/37)

TCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATA  >  NC_000913/1087530‑1087818

tCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCa                                                                                                                                             <  1:508220/150‑1 (MQ=255)

 cAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCAc                                                                                                                                            <  2:408969/150‑1 (MQ=255)

     gTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAg                                                                                                                                       <  1:954013/151‑1 (MQ=255)

       tctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGa                                                                                                                                      <  1:646055/150‑1 (MQ=255)

       tctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGa                                                                                                                                      <  2:744550/150‑1 (MQ=255)

        ctcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGAcc                                                                                                                                    >  2:77604/1‑151 (MQ=255)

         tcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGAccc                                                                                                                                   >  2:392346/1‑151 (MQ=255)

         tcATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGCTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCACGCGGCGTTCACGATAGAccc                                                                                                                                   >  1:440551/1‑151 (MQ=255)

            tAACGCTGTGCTAAAGCGGCGTGTATGGATTTCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTTGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGAcc                                                                                                                                    >  1:255572/1‑147 (MQ=255)

             aaCGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGa                                                                                                                                >  2:102748/1‑150 (MQ=255)

                 cTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAAt                                                                                                                             >  1:508150/1‑149 (MQ=255)

                   gtgCTAAAGCGGCGTGTATGGTTTCCTCAACGGTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGAc                                                                                                                         >  2:321799/1‑151 (MQ=255)

                    tgCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGAc                                                                                                                         >  2:815108/1‑150 (MQ=255)

                            cggcgTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCcaac                                                                                                                <  2:713410/151‑1 (MQ=255)

                             ggcgTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCcaac                                                                                                                >  1:637880/1‑150 (MQ=255)

                              gcgTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCcaacaa                                                                                                              <  2:385842/151‑1 (MQ=255)

                                    aTGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCcaca                                                                                                        <  2:835646/151‑1 (MQ=255)

                                      ggTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATa                                                                                                      <  1:947185/151‑1 (MQ=255)

                                           ccTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATgg                                                                                                  >  1:788320/1‑150 (MQ=255)

                                            cTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGAc                                                                                                >  2:953436/1‑151 (MQ=255)

                                              cAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGAc                                                                                                <  1:178065/149‑1 (MQ=255)

                                              cAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACAt                                                                                              >  1:74959/1‑151 (MQ=255)

                                                aCGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCTTTTTCTCCCCACCGCCAGCGGCGTTCACGATAGACCCGGAAATAGACGCCGCCAACAATCCACATAATGGACATaa                                                                                            <  2:549437/151‑1 (MQ=255)

                                                aCGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaa                                                                                            <  1:245117/151‑1 (MQ=255)

                                                   tttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaa                                                                                          <  2:641207/150‑1 (MQ=255)

                                                    ttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa                                                                                         >  1:398868/1‑150 (MQ=255)

                                                    ttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa                                                                                         <  2:351274/150‑1 (MQ=255)

                                                    ttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa                                                                                         <  2:128946/150‑1 (MQ=255)

                                                    ttttCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaa                                                                                         >  1:959345/1‑150 (MQ=255)

                                                       tctcCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACgg                                                                                     >  2:992850/1‑151 (MQ=255)

                                                        ctcctcATTAAAACAGGGGATGATAATGGAGATAGACGGATTATTTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAACTAGACGCCGACAACAATCCACATAATGGACATAAAAAACg                                                                                      >  2:1055645/1‑149 (MQ=255)

                                                         tcctcATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGcc                                                                                   >  1:287216/1‑151 (MQ=255)

                                                             cATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaa                                                                               <  1:122794/151‑1 (MQ=255)

                                                              aataagtcAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACGGGGGAGCAGGTGAGGTTTCTCCCCACGGCCACCGACGTTCGCGATAGACCAAGAAATAGACGCCGCAAACAATCCGCATAATGGGCATAAAAAACGGCCagaa                                                                               <  2:684977/143‑1 (MQ=255)

                                                              aTTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaag                                                                              <  1:215037/151‑1 (MQ=255)

                                                              aTTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCaga                                                                                >  2:873327/1‑149 (MQ=255)

                                                                tAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga                                                                             >  1:854210/1‑150 (MQ=255)

                                                                 aaaaCAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAgaagaa                                                                            <  2:970020/150‑1 (MQ=255)

                                                                   aaCAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAAc                                                                         >  1:726727/1‑151 (MQ=255)

                                                                      aGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGaa                                                                      <  2:290746/151‑1 (MQ=255)

                                                                        ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAcc                                                                    >  1:424959/1‑151 (MQ=255)

                                                                        ggAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAcc                                                                    >  2:951616/1‑151 (MQ=255)

                                                                            tGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcat                                                                >  1:219808/1‑151 (MQ=255)

                                                                               tAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat                                                             >  1:66721/1‑151 (MQ=255)

                                                                                aaTGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcatc                                                            <  1:92372/151‑1 (MQ=255)

                                                                                aaTGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat                                                             <  1:93262/150‑1 (MQ=255)

                                                                                aaTGGAGATAGACGGATTATCTTTCAACGGGGGAGCTGGTGCGTTTTCTCCCCTCGGCCAGCGGAGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAGCGGCCAGAAGAAAACGAACCtcatctt                                                             <  2:776135/150‑3 (MQ=255)

                                                                                 aTGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcatc                                                            >  2:428108/1‑150 (MQ=255)

                                                                                     agaTAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTc                                                       >  1:976852/1‑151 (MQ=255)

                                                                                       aTAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAc                                                     >  1:492553/1‑151 (MQ=255)

                                                                                          gACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCag                                                  <  1:874061/151‑1 (MQ=255)

                                                                                            cGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCagag                                                <  1:602906/151‑1 (MQ=255)

                                                                                               aTTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTg                                              >  1:19072/1‑150 (MQ=255)

                                                                                                ttATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGa                                             >  1:734944/1‑150 (MQ=255)

                                                                                                ttATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGa                                             >  1:819239/1‑150 (MQ=255)

                                                                                                  aTCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaaa                                           <  2:565253/150‑1 (MQ=255)

                                                                                                      ttCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacg                                      >  1:1011606/1‑151 (MQ=255)

                                                                                                      ttCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGta                                        <  2:792929/149‑1 (MQ=255)

                                                                                                       tCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgc                                     >  1:187364/1‑151 (MQ=255)

                                                                                                        cAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgc                                     <  1:708205/150‑1 (MQ=255)

                                                                                                         aaCTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgcta                                   <  2:106573/151‑1 (MQ=255)

                                                                                                         aaCTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgct                                    >  2:364478/1‑150 (MQ=255)

                                                                                                              gggAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCAt                              >  2:716706/1‑151 (MQ=255)

                                                                                                              gggAGCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCAt                              >  2:1018894/1‑151 (MQ=255)

                                                                                                                  gCTGGTGCGTTTTCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAgg                           <  1:248141/150‑1 (MQ=255)

                                                                                                                             ttCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATaa                <  1:1033352/150‑1 (MQ=255)

                                                                                                                             ttCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAac               >  2:396391/1‑151 (MQ=255)

                                                                                                                             ttCTCCCCACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAac               >  1:159711/1‑151 (MQ=255)

                                                                                                                                   ccACGGCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGa         <  2:508867/151‑1 (MQ=255)

                                                                                                                                       ggCCAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACata     <  2:398858/151‑1 (MQ=255)

                                                                                                                                         ccAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACataat   <  1:859107/151‑1 (MQ=255)

                                                                                                                                         ccAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACataat   <  2:739653/151‑1 (MQ=255)

                                                                                                                                          cAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACataata  <  2:173035/151‑1 (MQ=255)

                                                                                                                                          cAGCGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACataata  <  1:958301/151‑1 (MQ=255)

TCAATGTTCTCATAACGCTGTGCTAAAGCGGCGTGTATGGTTTCCTCAACGTTTTTCTCCTCATTAAAACAGGGAATGATAATGGAGATAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATA  >  NC_000913/1087530‑1087818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A