Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,150,087 A→G V60A (GTA→GCA)  eptC ← LPS heptose I phosphoethanolamine transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,150,0870AG100.0% 249.5 / NA 66V60A (GTA→GCA) eptCLPS heptose I phosphoethanolamine transferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (32/34);  total (32/34)

TGTTGGTTTCGAACATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAA  >  NC_000913/4149941‑4150233
                                                                                                                                                  |                                                                                                                                                  
tgttggtTTCGAACATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCgg                                                                                                                                                >  1:871307/1‑151 (MQ=255)
          gAACATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACcac                                                                                                                                      <  2:94639/151‑1 (MQ=255)
          gAACATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACcac                                                                                                                                      >  2:45128/1‑151 (MQ=255)
           aaCATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACcac                                                                                                                                      >  1:21377/1‑150 (MQ=255)
           aaCATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACcac                                                                                                                                      >  1:309576/1‑150 (MQ=255)
                   aaaCAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTg                                                                                                                             <  2:813598/151‑1 (MQ=255)
                        gAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATa                                                                                                                         >  2:254116/1‑150 (MQ=255)
                         aaCGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAAc                                                                                                                       >  1:22795/1‑151 (MQ=255)
                         aaCGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAAc                                                                                                                       >  2:1041786/1‑151 (MQ=255)
                            gCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGc                                                                                                                    <  2:904783/151‑1 (MQ=255)
                                 gCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAg                                                                                                                 <  1:16777/149‑1 (MQ=255)
                                 gCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTc                                                                                                               <  1:986169/151‑1 (MQ=255)
                                  cGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTcg                                                                                                              <  2:859061/151‑1 (MQ=255)
                                  cGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTcg                                                                                                              >  2:595800/1‑151 (MQ=255)
                                      aaCTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGaa                                                                                                          <  1:101646/151‑1 (MQ=255)
                                         tCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACt                                                                                                                              >  1:757579/1‑128 (MQ=255)
                                         tCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACt                                                                                                                              <  2:757554/128‑1 (MQ=255)
                                             gtccGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCAATTACTGCGGCAATAATTTTAATCCGCTTCGAAAAGAGGAATGCCGGGATCACCCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCg                                                                                                     <  2:657546/147‑1 (MQ=255)
                                             gACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGtt                                                                                                   <  2:76980/151‑1 (MQ=255)
                                               ccGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGtt                                                                                                   >  1:870899/1‑149 (MQ=255)
                                               ccGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGtt                                                                                                   >  2:154879/1‑149 (MQ=255)
                                               ccGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAg                                                                                                 <  2:948482/151‑1 (MQ=255)
                                                 gTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTg                                                                                               <  2:635044/151‑1 (MQ=255)
                                                   aGATGTCGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGcc                                                                                             <  2:593835/151‑1 (MQ=255)
                                                       gACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACt                                                                                          <  1:24955/150‑1 (MQ=255)
                                                       gACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACt                                                                                          <  1:1000282/150‑1 (MQ=255)
                                                       gACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACt                                                                                          <  1:333617/150‑1 (MQ=255)
                                                        aCGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACtat                                                                                        <  1:148498/151‑1 (MQ=255)
                                                              tagCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCAc                                                                                  >  2:896289/1‑151 (MQ=255)
                                                                    aGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGt                                                                            <  2:554319/151‑1 (MQ=255)
                                                                     gcgcCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTa                                                                           <  1:486138/151‑1 (MQ=255)
                                                                     gcgcCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTa                                                                           <  1:175505/151‑1 (MQ=255)
                                                                        ccgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaat                                                                        <  2:620175/151‑1 (MQ=255)
                                                                         cgccAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAaat                                                                        >  2:1020468/1‑150 (MQ=255)
                                                                            cAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATg                                                                    <  2:464115/151‑1 (MQ=255)
                                                                            cAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATg                                                                    >  2:780948/1‑151 (MQ=255)
                                                                                gagGCCGCCCATAGCACCACGCCGATTACTTCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCt                                                                >  1:884533/1‑151 (MQ=255)
                                                                                   gccgccCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTa                                                             <  2:766157/151‑1 (MQ=255)
                                                                                              caccacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTagag                                                  <  2:142681/151‑1 (MQ=255)
                                                                                              caccacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTag                                                    >  2:973500/1‑149 (MQ=255)
                                                                                               accacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTag                                                    >  1:840189/1‑148 (MQ=255)
                                                                                                 cacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGaaa                                               <  2:354407/151‑1 (MQ=255)
                                                                                                 cacGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGaaa                                               <  2:607987/151‑1 (MQ=255)
                                                                                                   cGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGaaaaa                                             <  1:161770/151‑1 (MQ=255)
                                                                                                        aTTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCaaa                                        <  2:533185/151‑1 (MQ=255)
                                                                                                         ttACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCaaa                                        >  2:689770/1‑150 (MQ=255)
                                                                                                             tGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGt                                     >  2:812182/1‑149 (MQ=255)
                                                                                                              gCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTa                                    <  1:134344/149‑1 (MQ=255)
                                                                                                               cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTaga                                                   <  2:318871/133‑1 (MQ=255)
                                                                                                               cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTaga                                                   >  1:318881/1‑133 (MQ=255)
                                                                                                               cGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTagag                                 <  1:432684/151‑1 (MQ=255)
                                                                                                                ggCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGc                                <  1:119931/151‑1 (MQ=255)
                                                                                                                ggCAATAATTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGc                                >  1:275372/1‑151 (MQ=255)
                                                                                                                   aataatTTTAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGt                             >  1:408259/1‑151 (MQ=255)
                                                                                                                           tAATCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGACTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGAAGAGCAGTGCCCAAcc                     >  1:447519/1‑151 (MQ=255)
                                                                                                                            aaTCCGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAAccc                    >  2:862767/1‑151 (MQ=255)
                                                                                                                               ccGCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAgg                 >  1:820709/1‑151 (MQ=255)
                                                                                                                                 gCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGc               >  2:620919/1‑151 (MQ=255)
                                                                                                                                 gCTTCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGc               >  1:302142/1‑151 (MQ=255)
                                                                                                                                   ttCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCtt             >  2:876454/1‑151 (MQ=255)
                                                                                                                                   ttCGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAAT‑ATTGCCTGTAGCAGGGGAGAAAAAAACCAAAAGGAGAGCAGTGCCCAACCCCGGGCttt            >  2:86205/1‑151 (MQ=255)
                                                                                                                                     cGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTc           >  2:118275/1‑151 (MQ=255)
                                                                                                                                     cGGAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTc           <  2:323087/151‑1 (MQ=255)
                                                                                                                                      ggAAAGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTcc          >  1:386338/1‑151 (MQ=255)
                                                                                                                                        aaaGAGGAATGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAg        <  1:812249/151‑1 (MQ=255)
                                                                                                                                               aaTGCCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTaaaa  >  2:327813/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TGTTGGTTTCGAACATCACAAACAGAACGCTCTGCGAGAACTCCTGACCGTAGATGACGTAGTAGCACAGCGCCGCCAGAGAGGCCGCCCATAGCACCACGCCGATTACTGCGGCAATAATTTTAATCCGCTTCGGAAAGAGGAATACCGGGATCAACCACAGCGAACTGAATAACAGCGAGTCGCGAATGCCGTTAGTGCCACTATAACCACTGATGTAAATAATGGCCTGTAGCAGAGTAGAGAAAAACCAAAAGTAGAGCAGTGCCCAACCCAGGGCTTTCCAGCTAAAA  >  NC_000913/4149941‑4150233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A