Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F50 I1 R1
|
121 |
119.5 |
3777739 |
97.6% |
3687073 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,606,883 |
G→A |
E145K (GAG→AAG) |
zntA → |
zinc, cobalt and lead efflux system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,606,883 | 0 | G | A | 99.2%
| 470.3
/ ‑3.9
| 121 | E145K (GAG→AAG) | zntA | zinc, cobalt and lead efflux system |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (62/58); total (63/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01 |
Only 100 of 121 total aligned reads displayed.
ATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTAT > NC_000913/3606736‑3607025
|
aTTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGc > 3:580572/1‑151 (MQ=255)
cGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAg < 1:409083/150‑1 (MQ=255)
gTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGtt < 2:354979/151‑1 (MQ=255)
gTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGtt > 3:576114/1‑151 (MQ=255)
tGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGtt > 3:567013/1‑150 (MQ=255)
cacaAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCa > 4:387197/1‑150 (MQ=255)
caAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAatc < 3:397731/151‑1 (MQ=255)
caAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAatc > 4:117938/1‑151 (MQ=255)
gTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAatcatc > 3:1332543/1‑151 (MQ=255)
tGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCg > 2:617341/1‑151 (MQ=255)
gAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATcc < 1:114584/149‑1 (MQ=255)
gAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCg < 3:1401487/150‑1 (MQ=255)
aaTCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGtt < 3:998915/151‑1 (MQ=255)
aaTCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGtt < 4:252969/151‑1 (MQ=255)
tCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCg > 4:282907/1‑151 (MQ=255)
gcgcTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCg < 3:230366/148‑1 (MQ=255)
gcgcTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCg < 1:50682/148‑1 (MQ=255)
gcgcTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGc < 1:387201/151‑1 (MQ=255)
gCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTg > 2:1007282/1‑151 (MQ=255)
aaaaaGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGc < 4:126174/151‑1 (MQ=255)
aaaGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGt > 4:28982/1‑151 (MQ=255)
aGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATc < 3:178074/151‑1 (MQ=255)
ggCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATcg > 2:1085361/1‑151 (MQ=255)
gCTATTCCCTGCGCGATGAACGGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATcgc < 2:1143529/151‑1 (MQ=255)
gCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATcgc < 4:466754/151‑1 (MQ=255)
cTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGTAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCCGTTCAATCATCAGATCGGGCAACTGGCGTTTATcgcg > 2:1135450/1‑151 (MQ=255)
tATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATcgcg > 1:260371/1‑150 (MQ=255)
cccTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCa < 2:1042922/150‑1 (MQ=255)
ccTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACg > 3:138746/1‑151 (MQ=255)
gcgcGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTg < 2:294951/151‑1 (MQ=255)
gcgcGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTg < 3:915466/151‑1 (MQ=255)
cgcgATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTgg > 2:217104/1‑151 (MQ=255)
cgcgATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTgg < 2:810854/151‑1 (MQ=255)
gcgATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGt < 2:202984/151‑1 (MQ=255)
cgATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGtt > 2:92481/1‑151 (MQ=255)
gATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTg > 3:1277322/1‑151 (MQ=255)
aTGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTgg > 2:369244/1‑151 (MQ=255)
gAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGc > 1:21306/1‑151 (MQ=255)
aaCAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCt > 3:634400/1‑151 (MQ=255)
cAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGt < 2:1082708/151‑1 (MQ=255)
cgccgAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCg < 4:383867/151‑1 (MQ=255)
cgccgAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCg > 1:233991/1‑151 (MQ=255)
cgAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGAtt < 4:315135/151‑1 (MQ=255)
cgAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGAtt < 2:1171611/151‑1 (MQ=255)
gaagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTg > 2:98795/1‑151 (MQ=255)
gaagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTg > 3:116080/1‑151 (MQ=255)
gaagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTg < 4:470220/151‑1 (MQ=255)
gaagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTg < 1:249484/151‑1 (MQ=255)
aagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGc > 1:335325/1‑151 (MQ=255)
aagaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGc > 4:335985/1‑151 (MQ=255)
agaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCt > 4:255291/1‑151 (MQ=255)
gaaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTc < 2:590654/151‑1 (MQ=255)
aaCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCg > 2:768716/1‑151 (MQ=255)
aCCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGt < 2:803696/151‑1 (MQ=255)
cGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCa < 2:580541/151‑1 (MQ=255)
gCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTc > 2:1276136/1‑149 (MQ=255)
aGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGc > 3:565253/1‑150 (MQ=255)
gCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCAGGTTGGGCTGTACCCGATTGCTCGTCAGGCAt < 1:190292/151‑1 (MQ=255)
cATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCAtt > 1:459880/1‑151 (MQ=255)
cATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCAtt < 2:1282543/151‑1 (MQ=255)
gAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGAt < 4:2861/150‑1 (MQ=255)
gAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATc > 1:49831/1‑151 (MQ=255)
gAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATc > 3:1404113/1‑151 (MQ=255)
aaaGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCa < 3:474802/151‑1 (MQ=255)
aaaagaATCTTCCGCTGATTACGCTAATCGTGATGATGGCAATCATCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACGACGCTGGTTAGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCaa < 3:1135504/148‑1 (MQ=255)
gagaATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAAt > 1:68126/1‑151 (MQ=255)
gagaATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAAt < 3:1276203/151‑1 (MQ=255)
gaATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAAt < 4:118301/149‑1 (MQ=255)
aaTCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCg > 4:164578/1‑151 (MQ=255)
aaTCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCg > 2:388032/1‑151 (MQ=255)
aTCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCgg > 3:669913/1‑151 (MQ=255)
ccGCTGTTTACGCTAATCGTGATGAGGGCAACCAGTTGGGTTCTGAAGAAGTTCAATCATCCTTTC‑GGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCa < 3:1096425/147‑1 (MQ=255)
ccGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCt > 4:46316/1‑151 (MQ=255)
cGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTa < 1:141709/151‑1 (MQ=255)
cTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACt > 1:53164/1‑151 (MQ=255)
tGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACtt > 1:116057/1‑151 (MQ=255)
gATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACt < 1:105738/149‑1 (MQ=255)
gATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc < 1:147890/151‑1 (MQ=255)
gATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTc < 2:1191478/151‑1 (MQ=255)
aCGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGcc < 1:229615/150‑1 (MQ=255)
aCGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCa < 2:634374/151‑1 (MQ=255)
gCTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCAtt < 2:1045082/151‑1 (MQ=255)
cTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTg > 1:241897/1‑151 (MQ=255)
cTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTg > 3:573378/1‑151 (MQ=255)
cTAATCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTg > 2:731167/1‑151 (MQ=255)
aaTCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGa < 2:1124239/150‑1 (MQ=255)
tCGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAAc > 2:999119/1‑151 (MQ=255)
cGTGATGATGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAAcc > 3:49946/1‑151 (MQ=255)
gatgatGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCtt < 2:484082/150‑1 (MQ=255)
gatgatGGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCtt > 4:393561/1‑150 (MQ=255)
gatgGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTaa < 4:452622/149‑1 (MQ=255)
atgGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATg > 1:453113/1‑150 (MQ=255)
atgGCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGa < 3:369276/151‑1 (MQ=255)
ggCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTGCCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAg < 1:361553/150‑1 (MQ=255)
ggCAATCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAg < 3:1007324/150‑1 (MQ=255)
gaaaTCAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCg > 1:256819/3‑151 (MQ=255)
cAGCTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGcc > 1:195770/1‑151 (MQ=255)
cTGGGGTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCt > 2:563084/1‑151 (MQ=255)
ggggTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCt < 2:1332470/149‑1 (MQ=255)
ggggTCTGAAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTAt < 3:617368/151‑1 (MQ=255)
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ATTCGTGCACAAGTTGAATCTGCGCTGCAAAAAGCAGGCTATTCCCTGCGCGATGAACAGGCCGCCGAAGAACCGCAAGCATCACGCCTGAAAGAGAATCTGCCGCTGATTACGCTAATCGTGATGATGGCAATCAGCTGGGGTCTGGAGCAGTTCAATCATCCGTTCGGGCAACTGGCGTTTATCGCGACCACGCTGGTTGGGCTGTACCCGATTGCTCGTCAGGCATTACGGTTGATCAAATCCGGCAGCTACTTCGCCATTGAAACCTTAATGAGCGTAGCCGCTAT > NC_000913/3606736‑3607025
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
