Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F50 I1 R1
|
121 |
119.5 |
3777739 |
97.6% |
3687073 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,629,003 |
T→C |
D179G (GAC→GGC) |
rbbA ← |
ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,629,003 | 0 | T | C | 99.0%
| 329.2
/ NA
| 98 | D179G (GAC→GGC) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (43/53); minor base A (1/0); total (45/53) |
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
CCAGCACTTCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGTCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCT > NC_000913/3628857‑3629150
|
ccAGCACTTCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCaa > 4:170353/1‑150 (MQ=255)
ccAGCACTTCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCaa > 2:765087/1‑150 (MQ=255)
cACTTCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAAccccc > 4:364338/1‑151 (MQ=255)
ttCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCggt > 3:239895/1‑149 (MQ=255)
tctcCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCgtt < 3:406297/150‑1 (MQ=255)
tcCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCgttgtt > 2:94183/1‑151 (MQ=255)
tcCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAAACCCCgttgtt > 3:96866/1‑151 (MQ=255)
ccGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCgttgtt > 2:1289352/1‑150 (MQ=255)
ccGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCgttgt < 3:275147/149‑1 (MQ=255)
ccGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCgttg < 2:732805/148‑1 (MQ=255)
gCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCt < 3:1250737/151‑1 (MQ=255)
gCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCt < 2:1080788/151‑1 (MQ=255)
tCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCtcatc > 2:1039057/1‑151 (MQ=255)
tCATCGCTAACAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGGGACCAGCACGCTCATATTAATCTGCCGCTGGCGAATAATGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGAGGGCCAACCCCCGGTGTTGGCtc > 3:909548/1‑148 (MQ=255)
cATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCtcatct < 3:502838/151‑2 (MQ=255)
tCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCtcatca > 1:326026/1‑149 (MQ=255)
cGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAg < 1:169338/150‑1 (MQ=255)
tACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTTGCTCATCAAGGa > 3:1356555/1‑149 (MQ=255)
cagccagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAAc < 3:1103263/151‑1 (MQ=255)
agccagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAAc > 4:281933/1‑150 (MQ=255)
agccagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACa < 2:1299360/151‑1 (MQ=255)
gccagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAg < 1:475517/151‑1 (MQ=255)
gccagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCCCATACTGCTCTGCCGCTGGCGAATACTGTCGATTAAATCCCAGAACTGGGAGCGGGGGAGCGGGGCAACCCCCGTTGTTGGCTCCTCCACGGTCAACa > 2:366686/1‑150 (MQ=255)
cagTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGtt < 2:421849/151‑1 (MQ=255)
agTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTc < 4:142620/151‑1 (MQ=255)
gTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTcc < 3:827054/151‑1 (MQ=255)
cGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCgg > 2:9695/1‑151 (MQ=255)
cGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCg < 2:125454/150‑1 (MQ=255)
gAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCggg > 3:792864/1‑151 (MQ=255)
aaGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGt < 2:1046177/151‑1 (MQ=255)
aGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTc < 2:455626/151‑1 (MQ=255)
aGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTc < 3:1085378/151‑1 (MQ=255)
aGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTc < 2:266621/151‑1 (MQ=255)
aGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTc < 2:947922/151‑1 (MQ=255)
gCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCg < 3:153430/151‑1 (MQ=255)
gCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCCGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGGGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGATTCGGGTc > 3:996065/1‑150 (MQ=255)
gTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGGCGTg > 4:332660/1‑151 (MQ=255)
tCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTgg < 3:379494/150‑1 (MQ=255)
gCCTCTTCCATATAGGCGGTGGGGACAAGCACACACATATTGTTCTGCCGCTTGCGAATACTGTAGATCAGAACCCAAAAATGGGGGGGGGAGAGCGGGCCAACCCCCGTTGGTGGGTCATCAAGGGACAAAAGTTTCGGGGCGGGGAtt > 3:1106336/1‑150 (MQ=255)
gCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTa < 2:1274804/151‑1 (MQ=255)
ccTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTaa < 3:603308/151‑1 (MQ=255)
ctctTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGGTGTTTGCTCATCAAGGATCAACAGTTCCGGGTCGTGGAtt > 2:1100400/1‑148 (MQ=255)
tCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAAcgcg < 2:539271/150‑1 (MQ=255)
tCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAAcgc < 2:417915/149‑1 (MQ=255)
atatAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCgcagc < 1:170355/151‑1 (MQ=255)
ataGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCgcagca < 2:1299487/150‑1 (MQ=255)
aGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGcaca < 3:1066665/150‑1 (MQ=255)
aGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGcaca < 1:108856/150‑1 (MQ=255)
gCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGTGGGGGAGAGCGGGACAACCCCCGTTGGCGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACTCGCAGCACAGcc > 3:1143569/1‑151 (MQ=255)
gCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGcc > 3:1373399/1‑151 (MQ=255)
gTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCaa < 4:98320/151‑1 (MQ=255)
gTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCa > 1:180434/1‑150 (MQ=255)
ggCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAg < 4:171690/150‑1 (MQ=255)
gCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGtt < 2:719496/151‑1 (MQ=255)
cGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGttt > 3:1027966/1‑151 (MQ=255)
gACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGtttt > 4:399264/1‑151 (MQ=255)
cAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGc > 3:1181105/1‑151 (MQ=255)
aCGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTc > 2:147536/1‑150 (MQ=255)
aCGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTc > 2:596485/1‑150 (MQ=255)
aCGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTc > 3:166803/1‑150 (MQ=255)
aCGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCa < 2:96851/151‑1 (MQ=255)
gCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATc > 2:1139674/1‑151 (MQ=255)
tCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATccc > 4:126211/1‑151 (MQ=255)
atatTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCccgc < 1:383689/151‑1 (MQ=255)
atatTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCccgc > 3:914887/1‑151 (MQ=255)
tGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCgg < 2:290644/150‑1 (MQ=255)
tctGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGgag > 2:467265/1‑149 (MQ=255)
ctGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGt > 3:345131/1‑151 (MQ=255)
gCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGttt < 1:281936/151‑1 (MQ=255)
ccGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTc > 4:139281/1‑151 (MQ=255)
cGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTcc > 4:248651/1‑151 (MQ=255)
ggCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTg < 3:155580/150‑1 (MQ=255)
ggCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGc > 3:197480/1‑151 (MQ=255)
gAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCgg < 3:871358/151‑1 (MQ=255)
aaTACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCgg > 2:880781/1‑150 (MQ=255)
tACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACg > 1:95101/1‑151 (MQ=255)
aCTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGCGTTTCCCTgccggccg > 3:1313071/1‑150 (MQ=255)
aCTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACg < 3:1139729/150‑1 (MQ=255)
tGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATc > 3:693046/1‑151 (MQ=255)
gTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGAt < 3:94197/149‑1 (MQ=255)
cGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATcgcg < 3:834426/151‑1 (MQ=255)
cGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATcgc < 4:283319/150‑1 (MQ=255)
cAGATCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAAc > 3:622040/1‑151 (MQ=255)
aTCCCAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGt > 4:13961/1‑151 (MQ=255)
cccAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGa > 1:76496/1‑134 (MQ=255)
cccAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGa < 4:76496/134‑1 (MQ=255)
ccAGAACTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCt < 3:1039104/151‑1 (MQ=255)
aCTGGGAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAAccc > 2:715004/1‑151 (MQ=255)
gggAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGt > 1:468620/1‑151 (MQ=255)
gggAGCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGt < 3:834646/151‑1 (MQ=255)
gCGGGAGAGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCt < 3:1289420/150‑1 (MQ=255)
gagaGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTca < 2:693021/151‑1 (MQ=255)
gagaGCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTca < 2:723143/151‑1 (MQ=255)
agagCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTcag < 2:166778/151‑1 (MQ=255)
gagCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTcagc < 3:1197525/151‑1 (MQ=255)
gagCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTcag < 3:765122/150‑1 (MQ=255)
agCGGGCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTcagca < 2:783910/151‑1 (MQ=255)
gggCCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCt < 1:18221/151‑1 (MQ=255)
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CCAGCACTTCTCCGGCATTCATCGCTACCAGCCAGTCGAAGCGTTCGGCCTCTTCCATATAGGCGGTGGCGACCAGCACGCTCATATTGCTCTGCCGCTGGCGAATACTGTCGATCAGATCCCAGAACTGGGAGCGGGAGAGCGGGTCAACCCCCGTTGTTGGCTCATCAAGGATCAACAGTTCCGGGTCGTGGATTAACGCGCAGCACAGCCCAAGTTTTTGCTTCATCCCGCCGGAGAGTTTCCCTGCCGGACGATCGCGAAACGGTGCTAACCCGGTGCTGGTCAGCAGCT > NC_000913/3628857‑3629150
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
