Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,197,294 |
T→C |
E783G (GAA→GGA) |
glnE ← |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,197,294 | 0 | T | C | 98.3%
| 424.2
/ ‑1.5
| 117 | E783G (GAA→GGA) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (53/62); total (54/63) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.80e-01 |
Only 100 of 120 total aligned reads displayed.
CGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTTCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACAGATGCATAATG > NC_000913/3197147‑3197440
|
cgcATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTcccc < 2:831342/151‑1 (MQ=255)
cgcATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTcccc < 4:709314/151‑1 (MQ=255)
gcATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCa < 2:527101/151‑1 (MQ=255)
cATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCa < 2:1151567/150‑1 (MQ=255)
cATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCAc > 4:648447/1‑151 (MQ=255)
ttttCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGt > 2:1663829/1‑151 (MQ=255)
tttCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTc > 2:1381981/1‑151 (MQ=255)
tctcGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTcc < 2:804160/150‑1 (MQ=255)
cgcgCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCa < 2:586179/148‑1 (MQ=255)
gcATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTc < 2:950943/151‑1 (MQ=255)
gcATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTc > 4:903438/1‑151 (MQ=255)
aTTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGt > 2:1264755/1‑151 (MQ=255)
tCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGttt < 4:506229/150‑1 (MQ=255)
cccGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGttttt < 1:187243/151‑1 (MQ=255)
ccGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCCGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTc < 2:366461/151‑1 (MQ=255)
cACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTg > 4:123652/1‑150 (MQ=255)
ttCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATa > 3:101156/1‑150 (MQ=255)
ttCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATa > 2:593931/1‑150 (MQ=255)
tCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATaa < 4:1554360/150‑1 (MQ=255)
tCCGTTTGCAGAGTTTTACCTTAACTCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGAGCGCCCTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCAGGTCCAGGCCTCGTTTTTc > 1:52369/1‑144 (MQ=255)
ccGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATGATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATc < 4:909769/151‑1 (MQ=255)
ccGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATc > 2:1449132/1‑151 (MQ=255)
cGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCg < 2:319292/151‑1 (MQ=255)
gTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCgg < 4:1540948/151‑1 (MQ=255)
gTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCgg > 4:1644483/1‑151 (MQ=255)
tttGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGc > 4:825840/1‑151 (MQ=255)
tttGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGc > 4:114113/1‑151 (MQ=255)
ttGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGc > 4:1628068/1‑150 (MQ=255)
tGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCa < 2:1469254/150‑1 (MQ=255)
tGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCa < 1:33189/150‑1 (MQ=255)
cAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTTCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAAt > 2:634931/1‑151 (MQ=255)
cAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCaaa > 4:177602/1‑150 (MQ=255)
agTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCt > 4:559000/1‑151 (MQ=255)
gTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCtt > 2:1643085/1‑151 (MQ=255)
ttACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCt < 2:1000742/150‑1 (MQ=255)
aCCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGc < 3:249594/150‑1 (MQ=255)
cTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCgg > 2:1445396/1‑150 (MQ=255)
cTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCgg > 4:452611/1‑150 (MQ=255)
tCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATg > 2:618746/1‑151 (MQ=255)
cACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGt < 4:1268385/151‑1 (MQ=255)
cgcgGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTc > 4:1400760/1‑150 (MQ=255)
gcgGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCAc > 2:1524900/1‑151 (MQ=255)
cgGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCAcc > 4:1091499/1‑151 (MQ=255)
ggCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCa < 2:834760/151‑1 (MQ=255)
cAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGc < 1:174794/151‑1 (MQ=255)
cAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGc < 1:154122/151‑1 (MQ=255)
cAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGc > 1:440391/1‑151 (MQ=255)
aGCGTTATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGc > 1:367666/1‑150 (MQ=255)
gCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCAt < 4:1413581/151‑1 (MQ=255)
cGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCAtt > 2:672728/1‑151 (MQ=255)
tCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTcc > 4:525840/1‑151 (MQ=255)
cATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTccc < 4:253840/151‑1 (MQ=255)
cATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTccc < 4:1254048/151‑1 (MQ=255)
aTCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCccgccg > 2:439339/1‑151 (MQ=255)
aTCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCccgccg > 2:369439/1‑151 (MQ=255)
cgcgACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGcccc > 2:1146294/1‑151 (MQ=255)
gcgACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcg < 4:1021153/151‑1 (MQ=255)
gACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcgg > 4:1439606/1‑150 (MQ=255)
gACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcgg > 3:335360/1‑150 (MQ=255)
aCGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcggac < 4:1059240/151‑1 (MQ=255)
cGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcggact < 2:43868/151‑2 (MQ=255)
cGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCcggacg > 2:1588022/1‑151 (MQ=255)
aCTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCggacggac < 3:166812/151‑1 (MQ=255)
gCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGc < 2:113926/150‑1 (MQ=255)
gCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCa < 1:348350/151‑1 (MQ=255)
cGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAg < 4:1406040/151‑1 (MQ=255)
cGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAg < 2:1441933/151‑1 (MQ=255)
tCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTc > 4:322117/1‑151 (MQ=255)
cAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTc < 4:1073138/150‑1 (MQ=255)
cAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTc < 4:601190/150‑1 (MQ=255)
cAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTc < 2:1675576/150‑1 (MQ=255)
cAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCg < 3:33254/151‑1 (MQ=255)
aaaGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCg > 4:1219664/1‑150 (MQ=255)
aaGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCg > 4:614459/1‑149 (MQ=255)
aaGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAg < 2:1218130/151‑1 (MQ=255)
gTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACtt < 2:578972/151‑1 (MQ=255)
aGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCAt > 2:796288/1‑151 (MQ=255)
agATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACaaa > 2:891510/2‑150 (MQ=255)
gATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAAt < 2:1442672/151‑1 (MQ=255)
cGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGcc > 4:45567/1‑151 (MQ=255)
gCCGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGTTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCg < 3:253700/151‑1 (MQ=255)
ccGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCgg > 2:419895/1‑151 (MQ=255)
ccGTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCgg < 2:2183/151‑1 (MQ=255)
gTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGaa < 2:711425/151‑1 (MQ=255)
gTACACTACACGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGa > 4:1227714/1‑150 (MQ=255)
ctacacGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGt > 4:538497/1‑151 (MQ=255)
acacGCGCACGCACCAGCGCCTGATGTTCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTAc < 4:635789/151‑1 (MQ=255)
acacGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTAc < 3:105856/151‑1 (MQ=255)
cacGCGCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTAc < 2:624361/150‑1 (MQ=255)
cgcgCACGCACCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTAcgcg < 2:1579038/151‑1 (MQ=255)
cacgcacCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTAc > 2:773133/1‑150 (MQ=255)
cacgcacCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACt > 4:1551616/1‑151 (MQ=255)
acgcacCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTg > 4:795289/1‑151 (MQ=255)
cgcacCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTg < 2:1069551/150‑1 (MQ=255)
gcacCAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGag < 3:389696/151‑2 (MQ=255)
ccAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACa < 2:566430/150‑1 (MQ=255)
ccAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACAg < 4:1681340/151‑1 (MQ=255)
cAGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAAc > 4:200876/1‑148 (MQ=255)
aGCGCCTGATGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACAGAt < 4:1447203/151‑1 (MQ=255)
aTGTCCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACAGATGCATAATg < 2:1593252/151‑1 (MQ=255)
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CGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGGTGAGCTGCGGATCGCCGTACACTACACGCGCACGCACCAGCGCCTGATGTTCCCACGTCCAGGCCTCGTTTTTCTGATAATCGGCAAATGCTTCTGCGGATGTCACCAGCATTCCCGCCGCCCCGGACGGACGCAGTCGAGCATCCACTTCATACAAAATGCCGGAAGAGGTACGCGTACTGAACAGATGCATAATG > NC_000913/3197147‑3197440
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
