Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,627,512 |
G→A |
A676V (GCC→GTC) |
rbbA ← |
ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,627,512 | 0 | G | A | 99.5%
| 695.4
/ NA
| 195 | A676V (GCC→GTC) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (96/96); total (96/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
AGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGGCCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATCC > NC_000913/3627365‑3627659
|
agAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCt < 2:361110/151‑1 (MQ=255)
gCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCCGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCAc > 4:1670595/1‑151 (MQ=255)
cGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGAGTCGGTTTTCGGCGCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACg > 4:1182353/1‑151 (MQ=255)
gggATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACg < 2:5297/150‑1 (MQ=255)
gggATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGt < 2:903866/151‑1 (MQ=255)
ggATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGt < 4:435330/150‑1 (MQ=255)
ggATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTa < 4:1130021/151‑1 (MQ=255)
gATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTaa < 4:1380712/151‑1 (MQ=255)
gATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTa > 2:221302/1‑150 (MQ=255)
tCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAAcc > 2:1645534/1‑151 (MQ=255)
tCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAAcc > 3:232175/1‑151 (MQ=255)
aCCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCtt > 2:420318/1‑151 (MQ=255)
aCCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCtt > 2:184699/1‑151 (MQ=255)
ccgccgGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCttt < 4:1293918/151‑1 (MQ=255)
gccgGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCtttt > 3:102101/1‑150 (MQ=255)
gccgGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCtttt > 1:149694/1‑150 (MQ=255)
ggAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCg < 4:1575063/151‑1 (MQ=255)
gAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGt < 4:1354709/151‑1 (MQ=255)
gAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGGGTCGATTGTCGGCGCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGGACGTAACCTTTTACCGt > 3:249069/1‑151 (MQ=255)
aaCAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGtt < 3:149708/151‑1 (MQ=255)
aCAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGttt < 4:458614/151‑1 (MQ=255)
aaTCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCa < 4:1408075/151‑1 (MQ=255)
aTCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTc > 4:352027/1‑149 (MQ=255)
aTCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTc > 4:497593/1‑149 (MQ=255)
gCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCAc < 1:252046/151‑1 (MQ=255)
cTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGccc > 2:981446/1‑148 (MQ=255)
gCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCt < 2:1246016/151‑1 (MQ=255)
gCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGAATGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCCCGCAACCTTTTACCGTTTCAGCa > 4:1437189/1‑146 (MQ=255)
aGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTc > 4:93021/1‑150 (MQ=255)
ggCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCt < 2:1422413/148‑1 (MQ=255)
tACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGc > 2:1309907/1‑150 (MQ=255)
aCGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTc > 2:606391/1‑151 (MQ=255)
tCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGGGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTcc > 1:96622/1‑149 (MQ=255)
ccGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGt < 2:1379850/150‑1 (MQ=255)
cGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTGGCCGCGTCCTGTAACCAGCTCGGGTGCATGGCCTGCACGTAACCTTTTACCGTTTCAGCACGGCTGGGCATGGCTCCGt < 2:443374/149‑1 (MQ=255)
gggTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTcc > 2:874436/1‑146 (MQ=255)
atagcgatagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAg < 4:1014451/151‑1 (MQ=255)
agcgatagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAg > 1:467995/1‑149 (MQ=255)
gatagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGcc > 4:25637/1‑151 (MQ=255)
gatagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGcc > 4:216158/1‑151 (MQ=255)
atagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGcca < 1:292442/151‑2 (MQ=255)
atagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGAGGCGATTGTCGGCTCGCCACCTCCTGTAACCAACTCTGGTGCATTACCTGCACGTAACCTTTTACCGGTTTAGCACGGCCCGGCATCTCTCCGTCCGTCCAAAAGcc > 2:638387/1‑150 (MQ=255)
tagcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCg > 4:18050/1‑150 (MQ=255)
agcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAg < 3:416537/151‑1 (MQ=255)
agcgCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGGGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCg > 4:838516/1‑149 (MQ=255)
cgcgTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGtt < 1:185183/151‑1 (MQ=255)
cgTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTTTCGGCTCGCCACATCCTGGAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGtt < 2:1405215/149‑1 (MQ=255)
tctcAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGGGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTcc > 1:239631/1‑149 (MQ=255)
cAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAgg < 2:1226045/151‑1 (MQ=255)
cAATATTCATCAGCCCGCTTTGGCTGGCGGGGGTCGATTGTCGGCCCGCCACATCCTGTAAACAACTCTGGGGCATGACCTGCACGTAAACTTTTACCGTTTCAGCACGGCCCGGCCTCGCCCCGTTGGTCCCGACGCCGAGTTCcac > 2:750662/1‑148 (MQ=255)
aaTATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGc < 4:373653/151‑1 (MQ=255)
aaTATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGc < 3:266753/151‑1 (MQ=255)
aaTATTCATCAGCCCGCTTTGGCTGGCGGGTGACGGTGGTGGGCTCGCCACATCCTGTAACCAGTTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGGTCGGCATCCCCCCGTCCATCCACACGCCCGGTTCca > 2:1557717/1‑146 (MQ=255)
atatTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCg < 2:298308/151‑1 (MQ=255)
tatTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCCCGGCATCGCTCCGTCGATCCAGATGCCGGGTTCCACAGGCGt > 1:122391/1‑151 (MQ=255)
tcatcaGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTAcc > 4:155471/1‑151 (MQ=255)
catcaGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCa < 1:313915/151‑1 (MQ=255)
tcaGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCAc > 3:330107/1‑150 (MQ=255)
aGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCAcgcg > 3:116681/1‑151 (MQ=255)
aGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCAcgcg < 4:600706/151‑1 (MQ=255)
gCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCAcgc > 4:1309893/1‑149 (MQ=255)
cGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGat > 2:753477/1‑151 (MQ=255)
gCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCAcgcgcg > 4:8064/1‑148 (MQ=255)
gCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGat > 4:205649/1‑150 (MQ=255)
gCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGa > 4:753188/1‑149 (MQ=255)
ggctggcGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATcgc > 3:308826/1‑150 (MQ=255)
ggctggcGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATcgc < 2:1298811/150‑1 (MQ=255)
ggcGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGccc < 4:1596019/150‑1 (MQ=255)
ggcGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCg < 1:336041/151‑1 (MQ=255)
gcGGGTGTCGATTATCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGa < 4:293426/151‑1 (MQ=255)
cGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGa < 2:514159/150‑1 (MQ=255)
gtCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTgg < 3:98031/151‑1 (MQ=255)
cGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGc < 2:963776/151‑1 (MQ=255)
cGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGc > 4:1464295/1‑151 (MQ=255)
aTTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCgg > 4:549538/1‑151 (MQ=255)
tGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCggg > 2:1007108/1‑150 (MQ=255)
gTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGa < 2:167526/150‑1 (MQ=255)
cGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGAtct > 4:253416/1‑151 (MQ=255)
cGCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATc < 2:1319553/151‑1 (MQ=255)
gCCACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCg < 4:63765/151‑1 (MQ=255)
ccACATCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGc > 2:1277547/1‑151 (MQ=255)
acaTCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCTCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCa < 4:948957/151‑1 (MQ=255)
acaTCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCa < 2:1497229/151‑1 (MQ=255)
aTCCTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCAcc < 4:185011/151‑1 (MQ=255)
cTGTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTg > 4:762560/1‑151 (MQ=255)
gTAACCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTg < 1:127837/149‑1 (MQ=255)
aaCCAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGatat > 4:114565/1‑151 (MQ=255)
cAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGc < 1:190665/151‑1 (MQ=255)
cAGCTCTGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGc < 3:448121/151‑1 (MQ=255)
ctctGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcg > 2:556717/1‑151 (MQ=255)
ctctGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcg > 4:705586/1‑151 (MQ=255)
tctGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcgc > 2:256342/1‑151 (MQ=255)
tctGGTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcgc > 4:130463/1‑151 (MQ=255)
ggTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcgcac < 3:204860/150‑1 (MQ=255)
ggTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcgc < 4:900299/148‑1 (MQ=255)
ggTGCATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCcgc < 4:1209541/148‑1 (MQ=255)
cATGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATc > 4:603189/1‑151 (MQ=255)
aTGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATcc > 2:732292/1‑151 (MQ=255)
aTGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATcc < 2:496898/151‑1 (MQ=255)
aTGACCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATcc < 3:36507/151‑1 (MQ=255)
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AGAAGCGGGATCACCGCCGGAACAATCGCTGGCAGGCTTTTTACGTCCGGGTTATAGCGATAGCGCGTCTCAATATTCATCAGCCCGCTTTGGCTGGCGGGTGTCGATTGTCGGCTCGCCACATCCTGTAACCAGCTCTGGTGCATGGCCTGCACGTAACCTTTTACCGTTTCAGCACGGCTCGGCATCGCTCCGTCGATCCAGACGCCGAGTTCCACAGGCGTACCACGCGCGATATCGCGCCCGAAATTGGGCGGGATCTCAATCGCCACCGTGATATCGCCCGCACGCATCC > NC_000913/3627365‑3627659
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
