Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,676,463 |
T→C |
T630A (ACG→GCG) |
yhjG ← |
putative inner membrane‑anchored periplasmic AsmA family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,676,463 | 0 | T | C | 100.0%
| 740.7
/ NA
| 204 | T630A (ACG→GCG) | yhjG | putative inner membrane‑anchored periplasmic AsmA family protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (96/108); total (96/108) |
Only 100 of 209 total aligned reads displayed.
GTCCGACACTGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGTCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCAAAAAT > NC_000913/3676315‑3676607
|
gTCCGACACTGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGccc > 2:706673/1‑151 (MQ=255)
tCCGACACTGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGcccc > 4:1071486/1‑151 (MQ=255)
ccGACACTGATTAGCCTCCCCTCCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCcccc < 2:123319/151‑1 (MQ=255)
cGACACTGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGcccccc < 4:1330669/151‑1 (MQ=255)
tGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACAt > 4:1271354/1‑151 (MQ=255)
ttAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGAGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATAc > 3:386747/1‑150 (MQ=255)
gCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAgcg < 2:1489516/151‑1 (MQ=255)
ccTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAgcgg > 2:1043535/1‑151 (MQ=255)
ccTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAgcgg < 2:866338/151‑1 (MQ=255)
tCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGTACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAgcggcg > 1:278190/1‑151 (MQ=255)
ccccTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAgcggc < 3:216283/149‑1 (MQ=255)
cGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGc > 3:116702/1‑149 (MQ=255)
cGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAg < 4:869720/151‑1 (MQ=255)
gAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAgtg < 4:69650/151‑1 (MQ=255)
aaGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAgtgt < 2:815583/151‑1 (MQ=255)
gTGAGATCAGTGCCAGTAACGCCGCCGCCGGAGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGAt > 3:154132/1‑151 (MQ=255)
gagaTCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATa < 4:1617466/150‑1 (MQ=255)
aTCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATcc > 2:1310049/1‑151 (MQ=255)
cAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCg < 4:477810/150‑1 (MQ=255)
cAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGa < 3:438102/151‑1 (MQ=255)
gTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAAt < 1:373190/151‑1 (MQ=255)
tGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAAtt > 4:1007603/1‑151 (MQ=255)
gCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAAtt < 2:1244824/150‑1 (MQ=255)
gCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTc < 1:435496/151‑1 (MQ=255)
actAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCtt > 2:69541/3‑151 (MQ=255)
gTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCttt > 2:777100/1‑151 (MQ=255)
aaCGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTa < 1:388210/150‑1 (MQ=255)
aaCGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTa < 1:106546/150‑1 (MQ=255)
aaCGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTAc > 4:460623/1‑151 (MQ=255)
aaCGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTAc > 2:2219/1‑151 (MQ=255)
cgccgccgcCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTActc < 2:576435/151‑1 (MQ=255)
gccgccgccGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTActct > 4:1134419/1‑151 (MQ=255)
ccgccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTActct < 2:1199636/150‑1 (MQ=255)
ccgccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACtctc > 3:167570/1‑151 (MQ=255)
cgccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTcc > 4:275957/1‑151 (MQ=255)
cgccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTcc < 4:753839/151‑1 (MQ=255)
gccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCg < 4:1262642/151‑1 (MQ=255)
ccgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCgg > 2:157845/1‑151 (MQ=255)
cgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCgg > 3:11899/1‑150 (MQ=255)
cgccgGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCgg > 3:470942/1‑150 (MQ=255)
tACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCa > 3:82360/1‑145 (MQ=255)
tACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCa < 1:82356/145‑1 (MQ=255)
tACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTc > 2:1095075/1‑151 (MQ=255)
aCCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTc < 2:464901/150‑1 (MQ=255)
aGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAAt < 2:369201/151‑1 (MQ=255)
tGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAg < 2:281524/150‑1 (MQ=255)
tGCCAGAGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCa > 1:202/1‑143 (MQ=255)
gCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCt > 2:20295/1‑151 (MQ=255)
gCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCt > 4:1523830/1‑151 (MQ=255)
gCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTcc < 2:1292003/150‑1 (MQ=255)
gCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTcc < 4:2222/150‑1 (MQ=255)
ccGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGa < 2:1370519/151‑1 (MQ=255)
ccGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGa < 2:1334912/151‑1 (MQ=255)
ccGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGa < 4:313497/151‑1 (MQ=255)
cGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGa > 2:1680376/1‑150 (MQ=255)
cagcaACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGc < 1:353794/151‑1 (MQ=255)
caACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCaaa < 2:1538299/151‑1 (MQ=255)
caACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCaa > 2:293299/1‑150 (MQ=255)
caACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCaa > 4:939582/1‑150 (MQ=255)
aCAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAAc > 1:464803/1‑151 (MQ=255)
aGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACtt > 3:297294/1‑151 (MQ=255)
gCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTtg < 4:673594/151‑1 (MQ=255)
cacGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTtgccgt < 4:587523/151‑1 (MQ=255)
cGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTtgccgtgc < 2:563823/151‑1 (MQ=255)
ggCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTtgccgtgccg < 2:941027/151‑1 (MQ=255)
ggCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTtgccgtgccg < 1:235518/151‑1 (MQ=255)
cAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGt < 4:1366000/151‑1 (MQ=255)
aaTCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGt > 2:244050/1‑150 (MQ=255)
aaTCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTa < 4:846315/151‑1 (MQ=255)
aTCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTa > 4:1570148/1‑150 (MQ=255)
cAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAAc > 4:1501178/1‑150 (MQ=255)
cAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAAc > 2:177528/1‑150 (MQ=255)
cAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACa < 4:1063644/151‑1 (MQ=255)
aGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACAt > 2:1270481/1‑151 (MQ=255)
gCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAAcg < 2:1670915/151‑1 (MQ=255)
gCTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAAcg < 2:237120/151‑1 (MQ=255)
cTTTCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAAcgc > 3:337363/1‑151 (MQ=255)
tttCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAAcgcg > 2:1464617/1‑151 (MQ=255)
tttCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAAcgcg > 4:378626/1‑151 (MQ=255)
ttCACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGt > 4:792183/1‑151 (MQ=255)
cACCCCAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTtc > 1:157377/1‑151 (MQ=255)
ccccAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTtctc > 4:1241515/1‑151 (MQ=255)
cccAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCa < 4:1534182/151‑1 (MQ=255)
ccAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAg < 4:1544139/151‑1 (MQ=255)
cAGCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGt > 3:406927/1‑151 (MQ=255)
gCCTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTAt > 2:1626050/1‑151 (MQ=255)
ccTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATc < 2:16723/151‑1 (MQ=255)
ccTGCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATc < 4:631448/151‑1 (MQ=255)
gCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGaa < 4:1104903/151‑1 (MQ=255)
gCGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGa > 4:1293137/1‑150 (MQ=255)
cGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGaaa < 3:277373/151‑1 (MQ=255)
cGGATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGaaa < 2:1070123/151‑1 (MQ=255)
gATTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGc > 3:86402/1‑151 (MQ=255)
aTTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGc > 2:210868/1‑150 (MQ=255)
aTTTTTAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGc > 2:1604578/1‑150 (MQ=255)
tttttAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCa > 2:1529187/1‑150 (MQ=255)
tttAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCaaa < 4:175925/150‑1 (MQ=255)
tAAACGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCAAAAAt > 3:69351/1‑151 (MQ=255)
aaaCGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCAAAAAt < 2:1133530/150‑1 (MQ=255)
aaaCGCCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCAAAAAt < 2:975730/150‑1 (MQ=255)
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GTCCGACACTGATTAGCCTCCCCTTCGGAAGGTGAGATCAGTGCCAGTAACGCCGCCGCCGGTGTTACCAGCGTTGCCAGTGCCGCAGCAACAGCACCACGGGCAATCAGCGGTCCGGCTTTCACCCCAGCCTGCGGATTTTTAAACGTCCCCCGCACATACAGCGGCGAACGCAGTGTGATAATCCGAATTCCTTTACTCTCCGGATCAATAGTCAAATCCAGCTGTTCCGAAGCAAAACTTGCCGTGCCGGTAACATTAATCAACGCGTTCTCAGTATCGAAAGCAAAAAT > NC_000913/3676315‑3676607
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
