Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,703,956 |
A→G |
V269A (GTG→GCG) |
dppC ← |
dipeptide/heme ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,703,956 | 0 | A | G | 100.0%
| 757.3
/ NA
| 208 | V269A (GTG→GCG) | dppC | dipeptide/heme ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (113/95); total (113/95) |
Only 100 of 210 total aligned reads displayed.
CCGAAATGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCACGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTGAACA > NC_000913/3703808‑3704102
|
cGAAATGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTcgcg > 4:751754/1‑150 (MQ=255)
gAAATGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGAc < 4:1068999/151‑1 (MQ=255)
gAAATGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGAc > 2:1348180/1‑151 (MQ=255)
aTGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACcca < 4:1269815/151‑1 (MQ=255)
gCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACccacc < 1:6560/151‑1 (MQ=255)
cACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACccacca < 2:1586469/151‑1 (MQ=255)
cGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGgc > 2:781545/1‑151 (MQ=255)
tAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCt > 1:393063/1‑151 (MQ=255)
aaTTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCtt > 3:310324/1‑151 (MQ=255)
aTCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTgcgc > 4:429110/1‑151 (MQ=255)
aCATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGa < 2:100153/149‑1 (MQ=255)
aCATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAAc < 2:1200794/151‑1 (MQ=255)
cATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACt > 3:93981/1‑151 (MQ=255)
cATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACt > 4:332808/1‑151 (MQ=255)
tttAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGc > 4:190104/1‑151 (MQ=255)
taataaCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCa > 4:674891/1‑150 (MQ=255)
taataaCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCa > 2:1627255/1‑150 (MQ=255)
ataaCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAaca < 4:938760/151‑1 (MQ=255)
taaCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAacac > 2:1409020/1‑151 (MQ=255)
aaCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAacac < 2:370058/150‑1 (MQ=255)
aCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGt > 4:1181297/1‑151 (MQ=255)
aCGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGt < 1:100954/151‑1 (MQ=255)
cGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTc < 2:217019/151‑1 (MQ=255)
ccATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCgg > 4:1194105/1‑151 (MQ=255)
ccATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCgg > 1:149373/1‑151 (MQ=255)
ccATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCg > 4:299867/1‑150 (MQ=255)
cATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGTCGCTTTGCGCGAACTGCAACACGTCg > 4:224861/1‑149 (MQ=255)
cATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCgg > 4:598645/1‑150 (MQ=255)
ctcGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGgag > 2:28472/1‑149 (MQ=255)
tcGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGc > 4:519248/1‑151 (MQ=255)
tcGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGc > 2:1360689/1‑151 (MQ=255)
cGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGgaga < 4:424535/148‑1 (MQ=255)
cGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGc > 2:1447958/1‑150 (MQ=255)
gAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCAt > 4:737050/1‑151 (MQ=255)
gAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCAt > 4:434697/1‑151 (MQ=255)
gAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCAt > 1:60010/1‑151 (MQ=255)
aCCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATgg > 4:787071/1‑151 (MQ=255)
ccTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATg > 1:311523/1‑149 (MQ=255)
ctctTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTg > 4:240133/1‑151 (MQ=255)
ctctTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTg > 4:381401/1‑151 (MQ=255)
ctTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGcc > 4:1236825/1‑151 (MQ=255)
ctTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGcc > 4:816454/1‑151 (MQ=255)
aCTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGcccc < 4:482059/150‑1 (MQ=255)
gCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACt < 4:702279/150‑1 (MQ=255)
gCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACt < 4:1307077/150‑1 (MQ=255)
tCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCa < 2:257918/149‑1 (MQ=255)
tCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAgg > 3:294123/1‑151 (MQ=255)
tGGGATCGGGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCCCCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTg < 1:95818/150‑1 (MQ=255)
tGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTgg > 4:574845/1‑151 (MQ=255)
gggATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTggc < 3:365622/151‑1 (MQ=255)
ggATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTggcg > 4:1053871/1‑151 (MQ=255)
aTCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTggcggc < 1:262361/151‑1 (MQ=255)
gAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCtg > 3:160773/1‑150 (MQ=255)
aGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCtgtg > 2:1261944/1‑151 (MQ=255)
cgTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGcccc < 3:280354/151‑1 (MQ=255)
cGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGc > 3:394486/1‑151 (MQ=255)
cGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGc < 2:330557/151‑1 (MQ=255)
cAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGAATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCg > 2:1156186/1‑151 (MQ=255)
aGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGa < 2:573550/151‑1 (MQ=255)
ccGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGa < 2:370169/151‑1 (MQ=255)
ccGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGa < 4:859164/151‑1 (MQ=255)
cGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGaa < 2:1125226/151‑1 (MQ=255)
cACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAAcc < 4:1089969/151‑1 (MQ=255)
cACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAAcc > 2:1426766/1‑151 (MQ=255)
aCCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAAcc > 2:1514847/1‑150 (MQ=255)
cccATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCaa < 3:470368/151‑1 (MQ=255)
cATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCa > 2:238039/1‑148 (MQ=255)
aTCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAagag < 2:620109/151‑1 (MQ=255)
cAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGagc > 3:180050/1‑150 (MQ=255)
aaaTGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCat < 2:1300391/150‑1 (MQ=255)
aaTGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCCCTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCatat < 2:1066085/151‑1 (MQ=255)
aTGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATc > 1:406207/1‑151 (MQ=255)
gCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCg < 2:1478736/150‑1 (MQ=255)
ccAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCg > 4:909334/1‑149 (MQ=255)
gCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGaa < 2:770274/150‑1 (MQ=255)
cACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATg > 1:464182/1‑151 (MQ=255)
aCCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATgg < 1:114256/151‑1 (MQ=255)
aCCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATgg > 4:1032633/1‑151 (MQ=255)
aCCGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATgg > 4:1209375/1‑151 (MQ=255)
cGTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCg > 1:179572/1‑151 (MQ=255)
gTCAGCAGGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGt < 4:370653/151‑1 (MQ=255)
tagcagGATCGCCAGACCCGGGAAGGACGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGtt > 2:1237850/2‑150 (MQ=255)
agcagGATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGtt > 2:297365/1‑149 (MQ=255)
ggATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGaa < 4:1614851/151‑1 (MQ=255)
gATCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGaaa < 2:518532/151‑1 (MQ=255)
tCGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAAcc > 3:420433/1‑151 (MQ=255)
cGCCAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCg < 2:897841/151‑1 (MQ=255)
ccAGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCg > 1:213266/1‑149 (MQ=255)
aGACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCg < 4:26292/151‑1 (MQ=255)
gACCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCg > 4:1393164/1‑150 (MQ=255)
aCCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGAc < 4:1504754/151‑1 (MQ=255)
aCCCGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGAc < 3:109070/151‑1 (MQ=255)
cGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGcc > 2:1149885/1‑151 (MQ=255)
cGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGcc > 3:371392/1‑151 (MQ=255)
cGGGAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGcc < 2:428511/151‑1 (MQ=255)
gggAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCt > 4:1565576/1‑151 (MQ=255)
gAAGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTg > 2:1560530/1‑150 (MQ=255)
aaGGTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTGa > 4:1404098/1‑150 (MQ=255)
ggTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTGAACa < 4:1166386/151‑1 (MQ=255)
ggTCGCGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTGAACa < 4:773912/151‑1 (MQ=255)
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CCGAAATGCACCGATAATTTATCTACATTTAATAACGCCATCTCGAACCTCTTACTGCTTCAGTTTGGGATCGAGCGCGTCACGCAGACCGTCACCCATCAGGTTAAATGCCAGCACCGTCAGCAGGATCGCCAGACCCGGGAAGGTCACGACCCACCAGGCGCTTTGCGCGAACTGCAACACGTCGGAGAGCATGGTGCCCCACTCAGGCGTTGGCGGCTGTGCCCCCATGCCGAGGAAACCAAGAGCAGCCATATCGAGAATGGCGTTAGAGAAACCGAGCGACGCCTGAACA > NC_000913/3703808‑3704102
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
