Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,146,023 |
A→G |
T677A (ACG→GCG) |
pflD → |
putative glycine radical domain‑containing pyruvate formate‑lyase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,146,023 | 0 | A | G | 99.3%
| 534.4
/ NA
| 142 | T677A (ACG→GCG) | pflD | putative glycine radical domain‑containing pyruvate formate‑lyase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (74/67); minor base T (0/1); total (74/68) |
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 142 total aligned reads displayed.
GGTGGTTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTACGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGAA > NC_000913/4145875‑4146166
|
ggtggtTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCg > 3:154078/1‑151 (MQ=255)
ggtggtTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCg > 3:592929/1‑151 (MQ=255)
ggtTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGtt < 2:440183/150‑1 (MQ=255)
tGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCt < 2:516636/150‑1 (MQ=255)
ggCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTg < 1:1095454/150‑1 (MQ=255)
tgACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACg > 1:565127/2‑150 (MQ=255)
aCGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTg > 1:778926/1‑150 (MQ=255)
aCGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTg > 2:333093/1‑150 (MQ=255)
cGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGa > 2:1471365/1‑150 (MQ=255)
ccAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAAt < 2:1219984/151‑1 (MQ=255)
aGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTc < 1:1405389/151‑1 (MQ=255)
aGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTc > 2:999156/1‑151 (MQ=255)
gACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTc > 4:208151/1‑150 (MQ=255)
aCGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGCAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCAc > 1:1487298/1‑151 (MQ=255)
aCGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCAc > 2:959716/1‑151 (MQ=255)
gTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGc < 1:931364/151‑1 (MQ=255)
gTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGCCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGc > 1:1521831/1‑151 (MQ=255)
ttttGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCg > 2:1067031/1‑151 (MQ=255)
ttGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGa < 1:806053/150‑1 (MQ=255)
ccGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCAGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGAccc > 1:1737223/1‑150 (MQ=255)
cGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTg > 3:455771/1‑151 (MQ=255)
cGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTg < 1:186071/151‑1 (MQ=255)
cAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAgg > 1:1585229/1‑149 (MQ=255)
cAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTg > 2:1542142/1‑151 (MQ=255)
cAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTg < 1:1106573/151‑1 (MQ=255)
gCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGaa < 3:338603/151‑1 (MQ=255)
gCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGaa < 3:338621/151‑1 (MQ=255)
cTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGagg > 4:212184/1‑143 (MQ=255)
tGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGc > 1:1607120/1‑151 (MQ=255)
gCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAATGGCCAACAGCGGTGCTGAAGTCAGTCAGTACGCTCGAAAACACGCTGCTGTCTAAGGGTTCGTTGCTGAACGTGAAATTCACTCCTGCGACCCTGGAACGTGAAGCa < 1:592646/150‑1 (MQ=255)
gCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAg < 2:448461/151‑1 (MQ=255)
cggcggCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGTTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGAtt < 1:976554/150‑1 (MQ=255)
cggcggCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGAtt > 1:300340/1‑150 (MQ=255)
gcggcTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACg > 2:1212131/1‑151 (MQ=255)
gcggcTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACg < 1:866040/151‑1 (MQ=255)
cACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGc > 3:592259/1‑151 (MQ=255)
cACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGc < 2:1451013/151‑1 (MQ=255)
aCCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGct > 3:272466/1‑150 (MQ=255)
aCCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGcc < 3:233292/151‑1 (MQ=255)
cccATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCg > 2:952880/1‑151 (MQ=255)
cATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGAc > 2:1291184/1‑151 (MQ=255)
gCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGActt < 1:1277572/150‑1 (MQ=255)
tGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGActtctt > 2:787845/1‑151 (MQ=255)
gggCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGActtctt > 2:1309629/1‑150 (MQ=255)
gggCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGActtct < 1:1189985/149‑1 (MQ=255)
gggCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGActtct < 1:1257330/149‑1 (MQ=255)
gggCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTa < 2:796379/151‑1 (MQ=255)
cAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACggg > 1:351190/1‑151 (MQ=255)
aGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGc > 2:200902/1‑151 (MQ=255)
cGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGttt < 1:678000/151‑1 (MQ=255)
cacaAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTAc > 3:47205/1‑151 (MQ=255)
acaAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTAcc < 1:607683/151‑1 (MQ=255)
acaAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTAcc > 4:211890/1‑151 (MQ=255)
caAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTAccc > 2:705371/1‑151 (MQ=255)
aaGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCa < 3:73768/151‑1 (MQ=255)
aaGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCa < 4:117898/151‑1 (MQ=255)
gggCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGc < 3:278386/151‑1 (MQ=255)
gCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCtt < 2:78838/151‑1 (MQ=255)
gCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCtt < 1:828993/151‑1 (MQ=255)
ccAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGGCCCTGGAAGGTGAAGCAAGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCtt < 1:73315/150‑1 (MQ=255)
cAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTaa < 4:55006/151‑1 (MQ=255)
cAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTa > 1:1392181/1‑150 (MQ=255)
cAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGtt > 2:1601912/1‑151 (MQ=255)
aGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTa < 2:134956/151‑1 (MQ=255)
aGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTa < 1:1568737/151‑1 (MQ=255)
ggTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTacaa < 2:1734282/151‑1 (MQ=255)
ggTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTaca < 1:1239954/150‑1 (MQ=255)
aCTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACat < 1:333043/151‑1 (MQ=255)
tGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACatat > 2:1606189/1‑151 (MQ=255)
gAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACata < 2:303467/149‑1 (MQ=255)
agtcagtcAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTc > 2:200915/1‑150 (MQ=255)
agtcagtcAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTc > 4:480159/1‑150 (MQ=255)
agtcagtcAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTc > 1:159190/1‑150 (MQ=255)
agtcagtcAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCa < 1:1242134/151‑1 (MQ=255)
agtcagtcAGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCa < 1:342466/151‑1 (MQ=255)
gtcagtcaGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAg < 2:1641873/151‑1 (MQ=255)
gtcagtcaGTAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAg < 2:1348343/151‑1 (MQ=255)
cagtcagtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGt < 2:519693/150‑1 (MQ=255)
agtcagtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATAtt > 4:296658/1‑145 (MQ=255)
agtcagtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGttt < 1:1488483/151‑1 (MQ=255)
agtcagtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGgtt < 1:228333/151‑1 (MQ=255)
gtcagtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAAGATATTCAGTTTa < 1:1318209/151‑1 (MQ=255)
gtAAGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgt > 2:1464958/1‑151 (MQ=255)
aaGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgtgg < 2:1230169/151‑1 (MQ=255)
aaGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgtgg > 1:1559603/1‑151 (MQ=255)
aGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgtggt > 2:772401/1‑151 (MQ=255)
aGCTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgtgg > 2:536479/1‑150 (MQ=255)
cTCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACgtggtg > 3:399390/1‑150 (MQ=255)
tCGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGa > 4:293611/1‑150 (MQ=255)
cGATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAAc > 1:1080608/1‑151 (MQ=255)
gATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACg > 1:1156863/1‑151 (MQ=255)
gATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACg < 1:808744/151‑1 (MQ=255)
gATAACACGCTGCTGTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTCAACg > 1:551996/1‑151 (MQ=255)
ctgctgTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGt > 1:640209/1‑151 (MQ=255)
ctgctgTCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGt > 2:1596539/1‑151 (MQ=255)
tCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCggg > 2:351900/1‑151 (MQ=255)
tCTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCgg < 1:689899/150‑1 (MQ=255)
cTAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCggg > 2:1531458/1‑150 (MQ=255)
tAACGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGa > 2:492139/1‑150 (MQ=255)
aaCGGTGCGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGaa < 2:565210/150‑1 (MQ=255)
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GGTGGTTGGCGCGACGCCAGACGGTCGTTTTGCCGGAGAACAGCTGGCAGACGGCGGCTTGTCACCCATGCTGGGCCAGGACGCACAAGGGCCAACAGCGGTACTGAAGTCAGTCAGTAAGCTCGATAACACGCTGCTGTCTAACGGTACGTTGCTGAACGTGAAATTCACTCCGGCGACCCTGGAAGGTGAAGCAGGATTACGCAAACTGGCCGACTTCTTACGGGCGTTTACCCAGCTTAAGTTACAACATATTCAGTTTAACGTGGTGAACGCCGACACGTTGCGGGAA > NC_000913/4145875‑4146166
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
