Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,705,211 |
T→C |
E33E (GAA→GAG) |
lepB ← |
leader peptidase (signal peptidase I) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,705,211 | 0 | T | C | 97.3%
| 358.2
/ 0.9
| 111 | E33E (GAA→GAG) | lepB | leader peptidase (signal peptidase I) |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (52/56); total (53/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.04e-01 |
Only 100 of 111 total aligned reads displayed.
AAATAAACGAACGCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTGCAGAAT > NC_000913/2705066‑2705354
|
aaataaaCGAACGCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCccg > 2:57385/1‑151 (MQ=255)
ataaaCGAACGCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCccgcc > 1:865847/1‑151 (MQ=255)
aaaaCGAACGCACAATCAATACGATAGCCAGTACCGAAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCccgccg < 2:328516/150‑1 (MQ=255)
aacgCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTa < 1:1337031/149‑1 (MQ=255)
aacgCACAATCAATACGATAGCCAGTACCGAAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAg < 1:1128429/150‑1 (MQ=255)
acgCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGt > 2:869198/1‑151 (MQ=255)
caatcaatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGa < 2:1346359/150‑1 (MQ=255)
aatcaatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGaa > 1:37850/1‑150 (MQ=255)
atcaatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGaaa > 1:459321/1‑150 (MQ=255)
caatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGaaaa > 1:214463/1‑149 (MQ=255)
aatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGaaaaa < 2:743311/149‑1 (MQ=255)
aatACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGa < 2:1297493/151‑1 (MQ=255)
aaaaCGAGAGCCAGTCCAGAAAAATCAGAAGCACCGGTTTCCGGCTGGCCTGGTTTCGCCGCATCCTTTTTCATCGTTGTTTTTTCCAGTGAGCCCCCGGCAACCGCCTGCGCCGCTGCCGGACGCTCCCGCCGTTTAGGTGCGAAAAAGa < 2:766861/148‑1 (MQ=255)
aTAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTAt < 2:280651/151‑1 (MQ=255)
aGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATcc > 1:734466/1‑151 (MQ=255)
ccAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCAc > 1:1702467/1‑151 (MQ=255)
gTACCGGAAAAACATAAGCGCGGGTTTCCAGCCAGCCAGGCTTCGGCGAAACTTTTTTCAACGTTGCTTTATCAAGTGATCCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCa < 1:1215948/151‑1 (MQ=255)
gTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGTCTTCGGCGCAGCCTTTGCCAACGTTGTTTTATCCAGTGAGCCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGc < 1:795342/150‑1 (MQ=255)
gTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACg < 1:1563246/149‑1 (MQ=255)
gTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCa < 2:583617/151‑1 (MQ=255)
tACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGa < 2:155028/137‑1 (MQ=255)
tACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGa > 1:155019/1‑137 (MQ=255)
aCCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCAcc > 2:319589/1‑151 (MQ=255)
ccGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCAcc > 2:347525/1‑150 (MQ=255)
ccGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCa < 2:1387004/151‑1 (MQ=255)
gaaaaaaCAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAGCCTTTTTAAACGTTGTTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCAt < 1:465448/148‑1 (MQ=255)
aaaaCAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATaaaa < 2:124977/151‑1 (MQ=255)
aaaCAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGCCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAAt < 1:1110942/151‑1 (MQ=255)
aaaCAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATaaaa > 2:1042313/1‑150 (MQ=255)
aCAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGc > 1:602325/1‑151 (MQ=255)
cAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGcc > 2:305110/1‑151 (MQ=255)
aaGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGt < 1:1449150/151‑1 (MQ=255)
gCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTc > 2:537436/1‑150 (MQ=255)
cACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCAc > 1:451820/1‑151 (MQ=255)
cACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCAc > 1:1702739/1‑151 (MQ=255)
cGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCAcc > 1:1036391/1‑149 (MQ=255)
cGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCAcc > 1:905815/1‑149 (MQ=255)
cGGTTTCCAGCCAGCCAGCCTACGGCGCATCCTTTTTCAACGTTGCTTTATCCAGTGAGCCCCCGGCAGCCGCCTGCTCCGCTGCCTGACGCCCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAg < 1:45728/151‑1 (MQ=255)
ggTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAgt > 2:1398393/1‑151 (MQ=255)
ggTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAg > 2:1364637/1‑150 (MQ=255)
gTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAgtg > 1:475922/1‑151 (MQ=255)
ttCCAGCCAGCCAGGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAgtgt < 2:1249499/150‑1 (MQ=255)
ttCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAgtgt < 1:794247/150‑1 (MQ=255)
agccagccagGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCa > 2:1365076/1‑150 (MQ=255)
ccagccagGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCaa < 1:731810/149‑1 (MQ=255)
cagccagGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCa < 2:1222371/151‑1 (MQ=255)
agccagGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCAc > 2:694222/1‑151 (MQ=255)
ccagGCTTCGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCa < 2:367016/151‑1 (MQ=255)
agGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCAcc > 1:339678/1‑148 (MQ=255)
ggCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGaa < 2:192092/151‑1 (MQ=255)
ggCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGa < 1:1146383/150‑1 (MQ=255)
cTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATc > 1:1022005/1‑151 (MQ=255)
cTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATc > 2:611628/1‑151 (MQ=255)
tCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGCCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATc < 1:262133/149‑1 (MQ=255)
cGGCGCACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAAt < 1:1195841/147‑1 (MQ=255)
cGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAgg < 2:1196181/151‑1 (MQ=255)
cGGCCCACCCTTTTTCAAGTTTGCTTTACCCAGTGGGTCCCGGGCGGCCGCCTGCGCCGCTGCCTGACGCACCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCCATCACCAGAATCa < 1:547868/149‑1 (MQ=255)
ggCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAggg > 2:685233/1‑151 (MQ=255)
ggCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAggg < 2:753949/151‑1 (MQ=255)
cgcACCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGc < 2:905883/150‑1 (MQ=255)
gcAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCa > 2:1351670/1‑150 (MQ=255)
cAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCaa > 2:712486/1‑150 (MQ=255)
cAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCaa > 1:1517981/1‑150 (MQ=255)
aaCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAAc > 2:1199633/1‑151 (MQ=255)
aaCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAAc > 1:664564/1‑151 (MQ=255)
aCCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAAc > 1:1644541/1‑150 (MQ=255)
ccTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCGGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACa < 2:1354417/150‑1 (MQ=255)
ttCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTc > 1:390214/1‑150 (MQ=255)
ttCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTc < 2:1551656/150‑1 (MQ=255)
ttCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTc < 2:1648167/150‑1 (MQ=255)
aaCGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGcc > 2:439018/1‑150 (MQ=255)
cGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATg < 2:909044/151‑1 (MQ=255)
cGTTGCTTTATCCAGGGAGTCCCCGGCACCCGCCGGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATgcgcaa < 2:880092/149‑3 (MQ=255)
gTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGc > 1:1212385/1‑151 (MQ=255)
ttGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGc < 2:1578703/150‑1 (MQ=255)
tttacccgttGAGTCCCCGGCAGCCGCCTGCGCCGCTGCTTGGCGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCa < 2:1408626/139‑1 (MQ=255)
ttATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTc > 2:1474903/1‑151 (MQ=255)
ccAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTaa < 2:740907/151‑1 (MQ=255)
tGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGt > 1:485485/1‑151 (MQ=255)
tGAGCCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAggg < 1:53498/150‑1 (MQ=255)
gAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGtt > 1:1648026/1‑151 (MQ=255)
gTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTa < 2:1329671/150‑1 (MQ=255)
ccccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTAttt > 1:511661/1‑151 (MQ=255)
ccccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTAtt < 2:53875/150‑1 (MQ=255)
ccccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTAt < 2:1212478/149‑1 (MQ=255)
ccccGCCGGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGtt < 1:1042234/147‑1 (MQ=255)
cccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATttg < 2:1494342/151‑1 (MQ=255)
cccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATttg < 1:229815/151‑1 (MQ=255)
ccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATttgt > 2:1556448/1‑151 (MQ=255)
ccGGCAGCCGCCTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATttgt < 2:851951/151‑1 (MQ=255)
ccgccTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCttt < 1:305082/151‑1 (MQ=255)
ccgccTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCttt < 2:1499889/151‑1 (MQ=255)
ccgccTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCtt < 1:722648/150‑1 (MQ=255)
gccTGCGCCGCTGCCTGCCGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGc > 1:110154/1‑151 (MQ=255)
gccTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGc > 2:683856/1‑151 (MQ=255)
cTGCGCCGCTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCg > 2:1589151/1‑151 (MQ=255)
ccgcTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAGTTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTg > 2:259620/1‑151 (MQ=255)
cTGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTGc > 1:1467618/1‑149 (MQ=255)
tGCCTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTGc > 1:794917/1‑148 (MQ=255)
ccTGACGCTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTGCAGAAt > 1:1123140/1‑151 (MQ=255)
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AAATAAACGAACGCACAATCAATACGATAGCCAGTACCGGAAAAACAGAAGCACCGGTTTCCAGCCAGCCAGGCTTCGGCGCAACCTTTTTCAACGTTGCTTTATCCAGTGAGTCCCCGGCAGCCGCCTGCGCCGCTGCCTGACGTTCCCGCCGTTTAGGTGCGAAAAAGAATTTATCCACGCACCATAAAATGCCCGTCACCAGTGTGGCAATCACCAGAATCAGGGCAAACATATTCGCCATGCCAACTCCTAAGGGTTATTTGTTGTCTTTGCCGACGTGCAGAAT > NC_000913/2705066‑2705354
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
