Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,632,618 |
G→A |
intergenic (‑28/+234) |
yhiJ ← / ← yhiL |
DUF4049 family protein/pseudogene, DUF4049 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,632,618 | 0 | G | A | 99.1%
| 465.3
/ ‑4.5
| 115 | intergenic (‑28/+234) | yhiJ/yhiL | DUF4049 family protein/pseudogene, DUF4049 family protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (46/68); total (47/68) |
| Fisher's exact test for biased strand distribution p-value = 4.09e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 |
Only 100 of 116 total aligned reads displayed.
ATTTGCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGGAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGT > NC_000913/3632474‑3632765
|
aTTTGCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACa < 2:1359912/151‑1 (MQ=255)
ttGCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACAt < 2:869090/150‑1 (MQ=255)
tGCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACAt > 1:53925/1‑149 (MQ=255)
gCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAg < 2:136749/150‑1 (MQ=255)
cAATATACCCAAACAGTTCTTTAGTGACGTTGGTAACATGCTCTTGCACCATATCATTTGTTTCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTTCCTCATATTATTTTCCGCGAGAAATACATAGtt < 1:761743/151‑1 (MQ=255)
cAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGtt < 1:1132163/151‑1 (MQ=255)
atatACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTa > 1:986258/1‑150 (MQ=255)
ataCCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAAc > 1:1098638/1‑150 (MQ=255)
ataCCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACa < 2:1285586/151‑1 (MQ=255)
aCCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACAtt > 1:182051/1‑151 (MQ=255)
cccAAACCGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACAttt > 1:1629541/1‑151 (MQ=255)
cccAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACAttt > 2:1511230/1‑151 (MQ=255)
cccAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACAtt < 1:497385/150‑1 (MQ=255)
cAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACAtttt > 1:399685/1‑150 (MQ=255)
cAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTa < 1:949598/151‑1 (MQ=255)
aCAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCt < 1:284672/151‑1 (MQ=255)
aCAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCt > 2:354218/1‑151 (MQ=255)
cAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCtt < 2:536024/151‑1 (MQ=255)
aGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTa < 1:1332537/151‑1 (MQ=255)
ttCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTAt < 1:1633061/150‑1 (MQ=255)
tCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATg > 1:1440579/1‑150 (MQ=255)
cTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGAc > 1:313790/1‑151 (MQ=255)
tttAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGAc > 2:1451469/1‑150 (MQ=255)
tGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATaca < 1:418505/150‑1 (MQ=255)
tGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCAt < 1:1212662/150‑1 (MQ=255)
aaCATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTc < 2:1180094/150‑1 (MQ=255)
aaCATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCg < 1:1446060/151‑1 (MQ=255)
aaCATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCg > 1:7411/1‑151 (MQ=255)
aaCATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCg < 2:1552561/151‑1 (MQ=255)
aCATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGa < 2:653954/151‑1 (MQ=255)
cATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGAt > 1:839070/1‑151 (MQ=255)
aTGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATg < 1:254392/151‑1 (MQ=255)
gCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATgg < 2:1621362/150‑1 (MQ=255)
ctTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGa < 1:1414670/149‑1 (MQ=255)
ctTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGa < 2:402361/149‑1 (MQ=255)
ttGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGaaa > 1:1551141/1‑150 (MQ=255)
tGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGaaaa < 2:983889/150‑1 (MQ=255)
tGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGaaa < 2:1373215/149‑1 (MQ=255)
tGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGaaa < 1:544690/149‑1 (MQ=255)
gCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAaat < 2:218416/150‑1 (MQ=255)
ccATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAAtt < 1:279070/151‑1 (MQ=255)
atatCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATtat > 1:446820/1‑151 (MQ=255)
atatCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATtat < 2:371080/151‑1 (MQ=255)
atatCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATtat < 1:665306/151‑1 (MQ=255)
tatCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATtat > 1:1012812/1‑150 (MQ=255)
atCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTatat > 2:880493/1‑151 (MQ=255)
atCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTatat > 1:158705/1‑151 (MQ=255)
tCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCATATGACATACACCTCATGTTCGATGGGAAAATAATTATAtt > 1:1334276/1‑151 (MQ=255)
cATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATAttt > 2:12426/1‑151 (MQ=255)
tgttgCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGc < 2:1674523/150‑1 (MQ=255)
tgCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGcaca > 1:693674/1‑150 (MQ=255)
tgCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGcaca < 1:91127/150‑1 (MQ=255)
gCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACaa > 2:1490351/1‑150 (MQ=255)
gCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACaa < 2:460023/150‑1 (MQ=255)
cGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAAt > 2:766087/1‑151 (MQ=255)
cGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAAt < 1:1462211/151‑1 (MQ=255)
gATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATc > 1:1346486/1‑151 (MQ=255)
gTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTc < 2:1338297/151‑1 (MQ=255)
gTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGc > 2:629353/1‑151 (MQ=255)
ttGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGcc > 2:822500/1‑151 (MQ=255)
ttGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGcc > 1:1102557/1‑151 (MQ=255)
aCTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCa < 1:1402883/150‑1 (MQ=255)
cTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCaa < 2:390995/150‑1 (MQ=255)
gTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCaaa < 1:1353255/149‑1 (MQ=255)
gTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCaaa < 2:471661/149‑1 (MQ=255)
gTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGc > 2:661967/1‑151 (MQ=255)
tCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGc < 1:528076/150‑1 (MQ=255)
gTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCat > 1:1037981/1‑150 (MQ=255)
aGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCataata < 1:1638123/151‑1 (MQ=255)
aGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCataat > 2:115712/1‑150 (MQ=255)
cctgccACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGaa < 1:1425157/151‑1 (MQ=255)
ctgccACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGaa > 1:172349/1‑150 (MQ=255)
gccACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAAt < 1:927646/150‑1 (MQ=255)
gccACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAAt < 1:171551/150‑1 (MQ=255)
ccACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAAttt < 1:100738/151‑1 (MQ=255)
acaGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCt < 1:526633/151‑1 (MQ=255)
caGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCtt > 2:529197/1‑151 (MQ=255)
aGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTa < 1:661908/151‑1 (MQ=255)
gTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAGTTTCTTAt < 2:53930/151‑1 (MQ=255)
ttCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtc > 2:1524198/1‑151 (MQ=255)
ttCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtc > 2:1355363/1‑151 (MQ=255)
tCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtct > 1:516833/1‑151 (MQ=255)
tCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtct > 2:233790/1‑151 (MQ=255)
ccAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtct < 1:330219/150‑1 (MQ=255)
cAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAACGCATAATATGAAATTTCTTAtct > 2:196968/1‑149 (MQ=255)
cAATTTTCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTAtctc > 1:1280542/1‑150 (MQ=255)
tttCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAg < 1:590102/150‑1 (MQ=255)
tttCATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGc > 2:1440851/1‑151 (MQ=255)
cATATTTTACCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCaga < 2:182064/151‑1 (MQ=255)
ttttACCTCATATTATTTACCGCGAGGAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGaa > 2:874253/1‑150 (MQ=255)
ttACCTCATATTATTTATCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAg < 2:1152427/150‑1 (MQ=255)
aCCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTcc > 1:1692778/1‑151 (MQ=255)
aCCTCATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTcc < 1:822434/151‑1 (MQ=255)
cATATTATTTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTa > 1:1445180/1‑150 (MQ=255)
attattTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAg < 2:1234310/150‑1 (MQ=255)
tattTACCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGAt < 2:1346579/150‑1 (MQ=255)
aCCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGt > 2:1625026/1‑148 (MQ=255)
aCCGCGAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTag < 1:629295/150‑1 (MQ=255)
gcgAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGc > 1:490169/1‑151 (MQ=255)
cgAGAAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGc < 1:1254515/150‑1 (MQ=255)
|
ATTTGCAATATACCCAAACAGTTCTTTAGTGAAGTTGGTAACATGCTCTTGCACCATATCATTTGTTGCGATTGTCGTTGTACTGTCGTTAGTGCCTGCCACAGTTCCAATTTTCATATTTTACCTCATATTATTTACCGCGAGGAATACATAGTTAACATTTTATCTTATGACATACACCTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGT > NC_000913/3632474‑3632765
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
