Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,240,380 |
T→C |
V19A (GTA→GCA) |
psiE → |
phosphate starvation inducible protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,240,380 | 0 | T | C | 98.2%
| 397.7
/ ‑1.6
| 108 | V19A (GTA→GCA) | psiE | phosphate starvation inducible protein |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (62/44); total (63/45) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 |
Only 100 of 108 total aligned reads displayed.
TCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTATTT > NC_000913/4240233‑4240527
|
tCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACt > 2:1690482/1‑151 (MQ=255)
cAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCa < 2:1047714/151‑1 (MQ=255)
aGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCaa < 1:1706376/151‑1 (MQ=255)
ggTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAAt < 2:1520785/151‑1 (MQ=255)
ggTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAAt > 1:1208270/1‑151 (MQ=255)
ttGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCt > 1:49705/1‑151 (MQ=255)
gAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCtt < 1:495581/150‑1 (MQ=255)
gAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTg < 1:123800/151‑1 (MQ=255)
aaCAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTgg < 2:603995/151‑1 (MQ=255)
aCAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGc > 1:341038/1‑151 (MQ=255)
cAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGcc > 1:306373/1‑151 (MQ=255)
cAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGcc < 2:1343888/151‑1 (MQ=255)
aaaCATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCctg > 1:77793/1‑151 (MQ=255)
aCATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCctgct < 2:1357885/151‑1 (MQ=255)
aCATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCctgct > 2:844187/1‑151 (MQ=255)
acacAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGc < 1:1456132/151‑1 (MQ=255)
acaAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCt < 1:937369/151‑1 (MQ=255)
acaAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCt < 2:1552323/151‑1 (MQ=255)
caAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTc < 1:167763/151‑1 (MQ=255)
aaaaaaTATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCg < 2:365600/151‑1 (MQ=255)
aaaTATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGcc > 1:706904/1‑151 (MQ=255)
atatAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTg < 1:851771/151‑1 (MQ=255)
ataGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGAt > 1:1555235/1‑151 (MQ=255)
taGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGAtt > 2:846265/1‑151 (MQ=255)
aGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGAttt > 1:1347810/1‑151 (MQ=255)
aTCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTg > 1:1493780/1‑151 (MQ=255)
tctcCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTgg > 1:1474137/1‑151 (MQ=255)
ctcCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGt > 2:618361/1‑151 (MQ=255)
ccGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTg < 2:561944/151‑1 (MQ=255)
cGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGt > 1:1404067/1‑151 (MQ=255)
gTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTc < 1:771862/151‑1 (MQ=255)
tCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCGATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCt > 2:840604/1‑151 (MQ=255)
cacaTTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCtt < 2:864477/151‑1 (MQ=255)
acaTTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTc > 1:268528/1‑151 (MQ=255)
aTTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCt > 1:287973/1‑151 (MQ=255)
aTTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCt < 2:842499/151‑1 (MQ=255)
aTTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCt > 2:499027/1‑151 (MQ=255)
tttttGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTc > 2:11696/1‑151 (MQ=255)
ttttGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTc < 2:969551/150‑1 (MQ=255)
tttGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCgg > 2:942664/1‑151 (MQ=255)
ttGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCgg < 2:968610/150‑1 (MQ=255)
tGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGGTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGc > 2:217304/1‑150 (MQ=255)
gTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAg < 1:276101/151‑1 (MQ=255)
ttATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCaa > 1:1134443/1‑148 (MQ=255)
ttATACAGGAAGCTCGCCACTGTGAAGGAGGGACTGCTATGACGTCACTCTCTCGTCCCCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGGTTTTGGTTGTCTTCCTCGGCaa > 1:1263418/1‑148 (MQ=255)
tataCAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGa > 1:1361883/1‑150 (MQ=255)
tataCAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGa > 1:581465/1‑150 (MQ=255)
ataCAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGaa > 2:233279/1‑150 (MQ=255)
cAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACgg < 1:1279987/151‑1 (MQ=255)
aGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGt > 2:724362/1‑151 (MQ=255)
aGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGt > 1:79675/1‑151 (MQ=255)
ggAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTg < 1:1442884/151‑1 (MQ=255)
cGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTgg < 2:803604/151‑1 (MQ=255)
ccACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCt > 1:1516436/1‑151 (MQ=255)
ccACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCt > 2:1220879/1‑151 (MQ=255)
cTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGAt > 2:1562882/1‑151 (MQ=255)
gtgAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGAtgt < 1:1193485/151‑1 (MQ=255)
aaGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCt > 2:307944/1‑151 (MQ=255)
aaGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCt > 1:538292/1‑151 (MQ=255)
gaggTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGtt < 1:28916/151‑1 (MQ=255)
aggTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTc < 1:285501/151‑1 (MQ=255)
gTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTcgc > 2:1221683/1‑151 (MQ=255)
cTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGcc > 1:1444031/1‑151 (MQ=255)
gCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGcc > 1:1135207/1‑149 (MQ=255)
aTGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGa < 1:1196780/149‑1 (MQ=255)
aTGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAAc < 1:1068182/151‑1 (MQ=255)
aTGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAAc > 2:1547582/1‑151 (MQ=255)
gACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACaa < 2:1686749/151‑1 (MQ=255)
aCGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACaa > 1:148160/1‑150 (MQ=255)
aCGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACa < 2:242783/149‑1 (MQ=255)
gTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAAcc < 2:770007/151‑1 (MQ=255)
cACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCa < 2:105477/150‑1 (MQ=255)
cACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCa < 2:1694411/150‑1 (MQ=255)
aCTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGc > 2:1038940/1‑151 (MQ=255)
tctctcGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCa > 1:540341/1‑150 (MQ=255)
tcGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAatat > 1:148700/1‑151 (MQ=255)
gTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATg > 1:333898/1‑150 (MQ=255)
ccGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGc > 1:1510430/1‑151 (MQ=255)
cgcgcgTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCt < 1:918841/151‑1 (MQ=255)
gcgcgTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTg > 2:1460051/1‑151 (MQ=255)
gcgTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGt > 2:1473041/1‑151 (MQ=255)
cgTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGt > 2:764847/1‑150 (MQ=255)
cgTGGAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGt > 1:128131/1‑150 (MQ=255)
ggAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGaa < 2:185235/151‑1 (MQ=255)
gAGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGa > 1:1446173/1‑149 (MQ=255)
aGTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAgg < 1:846200/151‑1 (MQ=255)
gTTTATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAgg > 2:1580010/1‑150 (MQ=255)
tATCTCCACCATTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACt < 1:992517/150‑1 (MQ=255)
ccaccaTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACtggtgg < 2:1146575/150‑1 (MQ=255)
ccaccaTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACtggtg < 1:667948/149‑1 (MQ=255)
accaTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGttt < 1:618307/151‑1 (MQ=255)
ccaTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGttt < 2:1219774/150‑1 (MQ=255)
caTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTAc < 2:306401/151‑1 (MQ=255)
caTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTAc > 2:278785/1‑151 (MQ=255)
aTTTTGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACt > 2:910638/1‑151 (MQ=255)
ttttGCAGACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACtt > 2:332558/1‑151 (MQ=255)
tGCAGACCGTACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTtc < 2:1616489/150‑1 (MQ=255)
gACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTAt < 1:942591/151‑1 (MQ=255)
gACCGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTAt > 1:732161/1‑151 (MQ=255)
ccGCACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTAttt > 1:570190/1‑151 (MQ=255)
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TCCAGGTTGAACAAAACATACACAAAAAATATAGATCTCCGTCACATTTTTGCGTTATACAGGAAGCTCGCCACTGTGAAGGAGGTACTGCTATGACGTCACTCTCTCGTCCGCGCGTGGAGTTTATCTCCACCATTTTGCAGACCGTACTCAATCTTGGCCTGCTGTGCCTCGGCCTGATTTTGGTTGTCTTCCTCGGCAAAGAAACGGTGCATCTGGCTGATGTGCTGTTCGCGCCAGAACAAACCAGCAAATATGAGCTGGTAGAAGGACTGGTGGTTTACTTTCTCTATTT > NC_000913/4240233‑4240527
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
