Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,281,308 |
A→G |
A443A (GCA→GCG) |
yjcE → |
putative cation/proton antiporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,281,308 | 0 | A | G | 99.1%
| 393.1
/ ‑4.5
| 106 | A443A (GCA→GCG) | yjcE | putative cation/proton antiporter |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (62/43); total (62/44) |
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 |
Only 100 of 107 total aligned reads displayed.
ATGAGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCAGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTGA > NC_000913/4281163‑4281454
|
gAGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTg < 1:206550/150‑1 (MQ=255)
aGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTgg > 2:636674/1‑150 (MQ=255)
cTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCg > 2:1519070/1‑150 (MQ=255)
cTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCg > 2:746130/1‑150 (MQ=255)
gtgtTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATtg < 2:1009160/151‑1 (MQ=255)
cTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGAGGCGATTGTGGCg > 1:1199145/1‑150 (MQ=255)
aggcggcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGAt > 2:796779/2‑151 (MQ=255)
ggcggcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCggt > 1:944671/1‑148 (MQ=255)
ggcggcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGAt < 1:862191/150‑1 (MQ=255)
gcggtTGGAGTCATTCTCTTCTCGCTGTTTGTCGGAGTGGTGATGTTGCCTATTCTGCTACAACTCATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCAGAAGTGGCGATTGTGGCGATcc < 2:1393380/151‑1 (MQ=255)
ggcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAg < 2:683414/151‑1 (MQ=255)
ggcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAg < 2:1449289/151‑1 (MQ=255)
gcTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATcc > 2:349212/1‑148 (MQ=255)
cTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGa > 2:1563467/1‑150 (MQ=255)
ggCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGaaa > 2:268415/1‑150 (MQ=255)
tctcttctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACTCATTGAAGTCGCGGATCATTCGCAACAATTGAATGAGGATCGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATggagga < 2:844710/150‑1 (MQ=255)
tctcttctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATggagga < 2:1681144/150‑1 (MQ=255)
cttctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGc < 1:1280552/149‑1 (MQ=255)
ttctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGt > 1:19028/1‑150 (MQ=255)
ttctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGACCCAGGAAATGGAGGGGCggc > 1:712814/1‑149 (MQ=255)
tctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTc < 2:806179/150‑1 (MQ=255)
tctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTc > 1:407663/1‑150 (MQ=255)
tctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCt > 2:868755/1‑151 (MQ=255)
ctcGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTg > 1:1364824/1‑151 (MQ=255)
cGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTggc < 1:370342/151‑1 (MQ=255)
cGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTgg > 2:417034/1‑150 (MQ=255)
cGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTgg < 2:1411733/150‑1 (MQ=255)
cGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTgg < 2:469410/150‑1 (MQ=255)
cTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTggcgg > 2:948039/1‑151 (MQ=255)
cTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTggcg < 2:1250956/150‑1 (MQ=255)
tttGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGCAAGAGGAAAGCATTGCGCGAGCGGCAACGGCGGAAGAGGTGATTGTGGCGATGCAGAAAATGGAGGAGGGGCTGGcggcgg > 1:415679/1‑151 (MQ=255)
gTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGAt < 1:324993/150‑1 (MQ=255)
gTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGAt < 1:664718/150‑1 (MQ=255)
cGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATAcc > 2:420357/1‑151 (MQ=255)
ggCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATAcc > 2:1082981/1‑150 (MQ=255)
ggCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCg > 1:703255/1‑151 (MQ=255)
ggtgATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAaga < 1:1113267/150‑1 (MQ=255)
ggtgATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAaga < 1:1524730/150‑1 (MQ=255)
tgATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAgaga > 2:1382164/1‑150 (MQ=255)
tgATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAgaga > 2:1576846/1‑150 (MQ=255)
gATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGaa > 1:1533925/1‑150 (MQ=255)
ccTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGAt > 1:162091/1‑150 (MQ=255)
cTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATa > 1:1414614/1‑150 (MQ=255)
aTTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATaa < 2:1549580/149‑1 (MQ=255)
cTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAgc > 1:1236741/1‑151 (MQ=255)
gCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAgc < 2:577268/149‑1 (MQ=255)
gCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATCGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAgc < 1:535981/149‑1 (MQ=255)
cTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAgctg > 1:953040/1‑150 (MQ=255)
acaacaCATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCtt > 1:1685576/1‑151 (MQ=255)
acacATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACg < 1:190228/151‑1 (MQ=255)
acaTTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACgg > 2:805284/1‑150 (MQ=255)
acaTTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACgg > 2:450391/1‑150 (MQ=255)
ttGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAgg > 2:48633/1‑150 (MQ=255)
gAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCa < 1:853261/151‑1 (MQ=255)
cgcgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTtct < 1:285258/151‑1 (MQ=255)
cgcgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTtct > 1:341612/1‑151 (MQ=255)
gcgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTtctc > 2:569293/1‑151 (MQ=255)
gcgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTtctc < 2:497480/151‑1 (MQ=255)
gcgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCCGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGGCAGTtct > 2:524212/1‑150 (MQ=255)
cgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTtctc < 2:318379/150‑1 (MQ=255)
cgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcg < 2:515496/151‑1 (MQ=255)
cgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcg > 1:1551627/1‑151 (MQ=255)
cgGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcg < 2:1309788/151‑1 (MQ=255)
ggATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcgc < 2:772865/151‑1 (MQ=255)
ggATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcgc > 2:189139/1‑151 (MQ=255)
gATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcgcg < 2:1051057/151‑1 (MQ=255)
aTCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcgcg > 2:1152448/1‑150 (MQ=255)
aTCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTcgcg > 1:1646642/1‑150 (MQ=255)
aacaaTTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGCGGTCAGTTCTCGCGTCATTgg > 1:1279055/1‑148 (MQ=255)
aacaaTTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTa > 2:578316/1‑150 (MQ=255)
caaTTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAAcc < 2:857620/151‑1 (MQ=255)
aTTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTg < 1:931378/151‑1 (MQ=255)
ttGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGc > 2:151161/1‑151 (MQ=255)
tGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGTGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCCGTTCTCGCGTCATTGGTAACCTGcg > 2:1354243/1‑151 (MQ=255)
tGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcg > 2:1051219/1‑151 (MQ=255)
gAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcg > 2:50013/1‑150 (MQ=255)
gAAAGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcg > 1:255773/1‑150 (MQ=255)
aaaGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcgtc > 1:488277/1‑151 (MQ=255)
aaGAGGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcgtc > 1:1005389/1‑150 (MQ=255)
agagGAACGTATTGCGCGAGCGGCAACAGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGcgtcgt > 2:1420989/1‑151 (MQ=255)
gagGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCgtcgtc < 1:1267428/151‑1 (MQ=255)
agGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGtcgtcg < 2:176959/151‑1 (MQ=255)
agGAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGtcgtcg < 1:1406624/151‑1 (MQ=255)
agGAACGTATTGCGCGAGCGGCAACGGCGGAAGCGGCGCTTGTGGCGATCCAGCAAATGGAGGAGCGTCTGGCGGCGGAAACCGGAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCCGcgacgt > 2:709717/1‑149 (MQ=255)
ggAACGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTcgc > 2:587313/1‑151 (MQ=255)
aCGTATTGCGCGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGcc > 1:1016853/1‑151 (MQ=255)
tATTGCGCGAGCGGCAACGGCGGAAGGGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGAt > 1:579243/1‑151 (MQ=255)
gcgcGAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTATGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGa > 2:95119/1‑150 (MQ=255)
tcgAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAAACAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACg > 1:736316/2‑150 (MQ=255)
gcgAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGt > 2:310200/1‑151 (MQ=255)
cgAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACg > 2:464966/1‑149 (MQ=255)
cgAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTa < 2:1236839/151‑1 (MQ=255)
cgAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTa < 1:349185/151‑1 (MQ=255)
gAGCGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTaa < 1:746069/151‑1 (MQ=255)
cGGCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAacga < 2:56852/151‑1 (MQ=255)
gCAACGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAacgacg < 2:706964/151‑1 (MQ=255)
aaCGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGtt < 2:661657/151‑1 (MQ=255)
aaCGGCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGGCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGtt > 1:1498710/1‑151 (MQ=255)
cggcggAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTg > 2:561673/1‑150 (MQ=255)
ggCGGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTGa > 2:631665/1‑150 (MQ=255)
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ATGAGCTGGTGTTCCTGGCGGCTGGCGTCATTCTCTTCTCGCTGTTTGTCGGCGTGGTGATGTTGCCTATTCTGCTACAACACATTGAAGTCGCGGATCATTCGCAACAATTGAAAGAGGAACGTATTGCGCGAGCGGCAACGGCAGAAGTGGCGATTGTGGCGATCCAGAAAATGGAGGAGCGTCTGGCGGCGGATACCGAAGAGAATATCGATAACCAGCTGCTTACGGAGGTCAGTTCTCGCGTCATTGGTAACCTGCGTCGTCGCGCCGATGGACGTAACGACGTTGA > NC_000913/4281163‑4281454
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
