Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,617,393 |
A→G |
D24G (GAC→GGC) |
deoC → |
2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,617,393 | 0 | A | G | 93.9%
| 330.1
/ NA
| 115 | D24G (GAC→GGC) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (55/53); minor base C (0/7); total (55/60) |
| Fisher's exact test for biased strand distribution p-value = 1.34e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 120 total aligned reads displayed.
AGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACG > NC_000913/4617245‑4617538
|
aGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGgca < 2:1716770/151‑1 (MQ=255)
gtgtgtTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGgcac > 2:309812/1‑151 (MQ=255)
gtgtgtTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGgca > 2:676283/1‑150 (MQ=255)
gtTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACcgac < 1:164271/151‑1 (MQ=255)
gCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACgag < 2:1255080/151‑1 (MQ=255)
gCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACgag < 1:373547/151‑1 (MQ=255)
aGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGaa > 1:1339769/1‑149 (MQ=255)
gTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGt < 2:1297386/151‑1 (MQ=255)
tAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTg > 2:1103833/1‑151 (MQ=255)
aGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTg < 1:159398/150‑1 (MQ=255)
aGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTg > 2:867643/1‑150 (MQ=255)
aTGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATc < 2:1283655/151‑1 (MQ=255)
agTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCg > 1:780722/2‑151 (MQ=255)
ttAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGcc > 1:1222384/1‑151 (MQ=255)
tAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGccc > 2:776511/1‑151 (MQ=255)
aGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCt > 2:350381/1‑151 (MQ=255)
gAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCtg < 1:758289/151‑1 (MQ=255)
aTACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCtgtg < 2:49400/151‑1 (MQ=255)
aTACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAACGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCtgtg < 1:878797/151‑1 (MQ=255)
tACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTgtgt > 1:810408/1‑151 (MQ=255)
aCTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTgtgt < 2:440156/150‑1 (MQ=255)
aaCAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGtca < 1:1535347/149‑1 (MQ=255)
aCAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGtcatc > 2:329843/1‑150 (MQ=255)
cAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGtcatc > 2:214716/1‑149 (MQ=255)
cAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGtcatc > 1:705023/1‑149 (MQ=255)
cAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAg < 1:697045/151‑1 (MQ=255)
aaCTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGc < 1:1620913/151‑1 (MQ=255)
aaGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAAc > 2:873587/1‑150 (MQ=255)
aaGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACt > 2:1182209/1‑151 (MQ=255)
aaGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGAACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACt > 2:1097447/1‑151 (MQ=255)
gTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCg < 1:995042/151‑1 (MQ=255)
aaTTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTc > 2:1607071/1‑151 (MQ=255)
aaTTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTc < 2:1057577/151‑1 (MQ=255)
aTTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCg < 1:1685325/151‑1 (MQ=255)
tttATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCgg < 2:1194331/150‑1 (MQ=255)
tttATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGc > 2:250506/1‑151 (MQ=255)
tGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATa < 2:504327/150‑1 (MQ=255)
ggCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATAcc > 2:534028/1‑151 (MQ=255)
ggCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATAcc < 1:1244769/151‑1 (MQ=255)
ggCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATAcc < 1:1530952/151‑1 (MQ=255)
gACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATAccgcc > 1:1054261/1‑151 (MQ=255)
gACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATAccgcc > 1:1397240/1‑151 (MQ=255)
aaGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACcgccgc < 2:571534/150‑1 (MQ=255)
agaATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCCCCCTGAATGACGACGGCCCCGACGAGAAAGTGATCGCCCTGTGTCACCAGGCCAAAACTCCGGTCGGAAATACCGCCGCTATCTGtat < 1:304948/151‑1 (MQ=255)
atgaaatgaCTGATCTGAAAGCAAGCAGCCGGGGTGCACTAAAATTGATGGCCCTGACCCCCCTGAATGACGACGGCCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGtatcta < 2:1284402/151‑1 (MQ=255)
gaaatgaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGtatctatc > 1:1575490/1‑151 (MQ=255)
aaatgaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCCCCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCAAAAACTCCGGTCGGAAATACCGCCGCTATCTGTATCTATcc < 2:245382/151‑1 (MQ=255)
atgaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTc > 1:381027/1‑151 (MQ=255)
atgaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTAAAATTGATGGCCCTGACCCCCCTGAATGACGACGGCACCGACGAGAAAGTGACCGCCCTGTGTCATCAGGCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTc < 2:476843/151‑1 (MQ=255)
tgaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCg > 2:1182653/1‑151 (MQ=255)
gaCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGc > 2:757847/1‑151 (MQ=255)
aCTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCt > 2:426151/1‑151 (MQ=255)
cTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCtt > 1:1057244/1‑151 (MQ=255)
cTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCtt > 1:188863/1‑151 (MQ=255)
gATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCttt > 2:482597/1‑150 (MQ=255)
tCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATc > 1:52031/1‑151 (MQ=255)
aaaGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGCCCCCCCTGAATGACGACGGCCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGCCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTa < 2:1565270/145‑1 (MQ=255)
aaaGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCCCCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCACCAGCCAAAACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATccc < 1:1366128/149‑1 (MQ=255)
aaaGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCg > 1:691481/1‑150 (MQ=255)
aagcaagcAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGAt > 2:725891/1‑151 (MQ=255)
aagcaagcAGCCTGCGTGCACTGAAATTGATGGACCGGACCCCCCTGAATGCCGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCAAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGAt < 1:194866/151‑1 (MQ=255)
gcaagcaGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGtatctat > 2:1626015/1‑132 (MQ=255)
aagcaGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCt > 1:642478/1‑151 (MQ=255)
aagcaGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCt > 2:1385428/1‑151 (MQ=255)
aagcaCCCTGCGTGCAAGAAAATTGATGGACTGCCCCCCCCGGAATGCCGCCGGCCCCGACGAGAAAGTGATCCCCTTGTGTCATCAGGCCAAACCCCCGGTCGCAAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGAtt < 1:912199/148‑1 (MQ=255)
gcagcCTGCGTGCATTGAAATTGATGGACCTGCCCACCCTGAATGACGACGCCACCGACGAAAAAGGGATCGCCTTGTGTCATCAGCCAAAACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTc < 1:1198411/150‑1 (MQ=255)
agcCTGCTTGCACTGAAATTGATGCTCCTGACCTCCCTAACGGACGCCGCCCCGGACGATAAAGTGGTCGTCTTGTATCATCAGGCAAAAACCCCTGCCGGCATTCCCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTc < 2:6377/148‑1 (MQ=255)
agcCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGc > 2:1031387/1‑150 (MQ=255)
ccTGCGTGCACTGAAATTGATGGACCTGCCCCCCCTGAATGACGCCGGCCCCGACGAAAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCaaa < 1:1448851/151‑1 (MQ=255)
cTGCGTGCACTGAAATTGATGGACCCGACCCCCCTAAATGACGCCGGCCGCGACGAAAAAGTGATCGCCTTGTGTCATCAGCCCAAACCTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCaa < 1:676225/149‑1 (MQ=255)
tGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAAc > 2:1449659/1‑151 (MQ=255)
gCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCTCAAAAct > 1:1465869/1‑151 (MQ=255)
gTGCACTGAAATTGATGGACCTGACCCCCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAAc < 2:1112789/148‑1 (MQ=255)
gTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAActct > 2:37968/1‑151 (MQ=255)
tGCACTGAAATTGATGGACCTGACCACCCTGAATGACGCCGGCCCCGACGAGAAAGTTATCGCCCTGTGTCATCAGACAAAACCTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAActct < 1:370647/150‑1 (MQ=255)
tGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTg > 1:1480306/1‑151 (MQ=255)
tGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTg > 1:1360549/1‑151 (MQ=255)
cACGGAAATTGAGGGCCCTGACCCCCCTGAATGACGACGCCCCCGAGGAGAAAGTGATCCCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTg < 2:1425976/149‑1 (MQ=255)
aCTGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGaa > 1:1591187/1‑150 (MQ=255)
cTGAAATTGATGGCCCTGACCCCCCTGAATGCCGACGCCCCCGACGAGAAAGTGACCGCCCTGTGTCACCAGGCCAAACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGaaa < 1:1132620/150‑1 (MQ=255)
tGAAATTGATGGACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGaa > 2:1515840/1‑148 (MQ=255)
aaaTTGATGGCCCTGACCCCCCTGAATGACGCCGGCCCCGACGAGAAAGTGACCGCCCTGTGTCATCGGGCCAAACCTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAaga < 1:1694785/149‑1 (MQ=255)
aaTTGATGGACCTGACCCCCCTGAATGACGACGCCCCCGACGAGAAAGTGACCGCCCTGTGTCATCAGGCAAAAACCCCGGTCGGAAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCa < 1:449134/151‑1 (MQ=255)
gATGGCCCTGCCCCCCCTAAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAgg < 1:507853/149‑1 (MQ=255)
ggcccTGACCCCCCTGAATGCCGACGGCCCGGACGAGAAAGTGATCGCCCTGTGTCATCAGGCAAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAgg < 2:93545/143‑1 (MQ=255)
gACCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCAccc > 2:1565692/1‑151 (MQ=255)
aCCTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAActct > 2:215316/1‑133 (MQ=255)
ccTGCCCCCCCTGAATGACGACGGCACCGACGAAAAAGTGATCGCCCTGTGTCACCAGGCAAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCAccc < 2:155197/149‑1 (MQ=255)
ccTGACCCCCCTGAATGACGACGGCCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAActct < 1:215298/132‑1 (MQ=255)
ccTGACCACCCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCg > 1:343933/1‑151 (MQ=255)
ccccccTGAATGACGACGGCCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAACCTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGaa < 1:260306/146‑1 (MQ=255)
ccccTGAATGACGACGCCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATcc < 1:142148/150‑1 (MQ=255)
accCTGAATGACGACGGCACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATcc > 2:1039578/1‑151 (MQ=255)
ccTGAATGACGCCGCCCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGCCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGt < 1:602147/151‑1 (MQ=255)
ccTGAAGGACGACGGCACCGACGAAAAAGTGATCGCCTTGTGTCATCAGGCCAAAACCCCGGCCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGt < 1:1256450/151‑1 (MQ=255)
aaaTGACGCCGGCACCGACGAAAAAGTGATCGCCCTGTGTCATCAGCCCAAAACCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTAt < 1:97772/149‑1 (MQ=255)
aaggacgacggcACCGACGAGAAAGTGACCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCg < 1:73875/148‑1 (MQ=255)
aaTGACGGCGGCGCCGACGAAAAGGTGTTCGCCCTGTTTCACCAGCCCAAACCTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATc < 2:1627554/150‑1 (MQ=255)
tGACGACGGCACCGACGAAAAAGTGACCCCCCTGTGTCATCAGGCCAAACCCCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGc < 1:469371/150‑1 (MQ=255)
cgacggcACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACg > 1:1588578/1‑151 (MQ=255)
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AGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGTGAATTTTATTGGCGACAAGCCAGGAGAATGAAATGACTGATCTGAAAGCAAGCAGCCTGCGTGCACTGAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCGCTACG > NC_000913/4617245‑4617538
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
