Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,183,795 A→G T851A (ACC→GCC)  rpoB → RNA polymerase, beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,183,7950AG100.0% 248.4 / NA 64T851A (ACC→GCC) rpoBRNA polymerase, beta subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (38/26);  total (38/26)

AGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCAGAAGAAA  >  NC_000913/4183650‑4183942
                                                                                                                                                 |                                                                                                                                                   
aGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCt                                                                                                                                                <  1:80155/151‑1 (MQ=255)
  cGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTg                                                                                                                                               >  2:13206/1‑150 (MQ=255)
   gTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGAc                                                                                                                                             >  2:678510/1‑151 (MQ=255)
    ttCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGAc                                                                                                                                             >  1:457731/1‑150 (MQ=255)
      cATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACAt                                                                                                                                           <  2:133267/150‑1 (MQ=255)
          ccGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCg                                                                                                                                       >  1:653617/1‑150 (MQ=255)
           cGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGa                                                                                                                                      >  1:1016367/1‑150 (MQ=255)
              ggAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACg                                                                                                                                   >  2:569790/1‑150 (MQ=255)
               gAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGTTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGt                                                                                                                                  <  1:909484/150‑1 (MQ=255)
                aaTGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTgg                                                                                                                                <  1:428043/151‑1 (MQ=255)
                   ggTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTg                                                                                                                             >  1:636199/1‑151 (MQ=255)
                     ttACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGa                                                                                                                            >  1:279378/1‑150 (MQ=255)
                        cAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCt                                                                                                                        >  2:13281/1‑151 (MQ=255)
                         aaCTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTg                                                                                                                       >  2:718670/1‑151 (MQ=255)
                         aaCTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTg                                                                                                                       >  1:222952/1‑151 (MQ=255)
                         aaCTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTg                                                                                                                       >  1:30780/1‑151 (MQ=255)
                           cTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTgcg                                                                                                                     >  1:1168514/1‑151 (MQ=255)
                              cGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGct                                                                                                                   <  1:475434/150‑1 (MQ=255)
                               gAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGctct                                                                                                                 >  1:891518/1‑151 (MQ=255)
                               gAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGctct                                                                                                                 >  2:625704/1‑151 (MQ=255)
                               gAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGctc                                                                                                                  >  2:541693/1‑150 (MQ=255)
                                    cTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGAGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCaa                                                                                                             >  1:577528/1‑150 (MQ=255)
                                      ccATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAAc                                                                                                           <  2:208719/150‑1 (MQ=255)
                                        aTCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTgg                                                                                                        <  1:18441/151‑1 (MQ=255)
                                              gTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGGGAAGCTGCGCTCTCCAAACTGGATGAAt                                                                                                  >  2:1154575/1‑151 (MQ=255)
                                                aTCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATcc                                                                                                >  1:58011/1‑151 (MQ=255)
                                                aTCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATcc                                                                                                <  2:436002/151‑1 (MQ=255)
                                                  ccGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCgg                                                                                              >  1:693544/1‑151 (MQ=255)
                                                    gAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTa                                                                                            <  2:154032/151‑1 (MQ=255)
                                                     aGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTAt                                                                                           <  2:895210/151‑1 (MQ=255)
                                                     aGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTAt                                                                                           >  1:148199/1‑151 (MQ=255)
                                                       cGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCg                                                                                         >  2:307174/1‑151 (MQ=255)
                                                         tgttgtTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGtt                                                                                       >  1:1068448/1‑151 (MQ=255)
                                                              ttCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACa                                                                                   >  1:884648/1‑150 (MQ=255)
                                                                    aaGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGc                                                                            <  1:484423/151‑1 (MQ=255)
                                                                      gACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCgg                                                                          >  2:591606/1‑151 (MQ=255)
                                                                        ccGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGaa                                                                        <  1:325333/151‑1 (MQ=255)
                                                                        ccGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGa                                                                         >  2:1094977/1‑150 (MQ=255)
                                                                         cGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGa                                                                         >  2:487176/1‑149 (MQ=255)
                                                                          gTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGt                                                                      <  2:1135336/151‑1 (MQ=255)
                                                                          gTTTCACCACCATCCACATTCAGGAACTGGCGTGGGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAg                                                                       >  2:621451/1‑150 (MQ=255)
                                                                              caccacCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGAcc                                                                  <  1:608929/151‑1 (MQ=255)
                                                                                ccaccaTCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCgg                                                                <  2:1088381/151‑1 (MQ=255)
                                                                                    caTCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGc                                                            >  1:434037/1‑151 (MQ=255)
                                                                                       ccACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGa                                                          <  1:126704/150‑1 (MQ=255)
                                                                                             tCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCt                                                    <  2:638540/150‑1 (MQ=255)
                                                                                              cAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCtgg                                                  >  2:1192915/1‑151 (MQ=255)
                                                                                              cAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCtgg                                                  <  2:867310/151‑1 (MQ=255)
                                                                                                ggAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGGCCGGTGGCGACATTCtggtt                                                <  2:513901/151‑1 (MQ=255)
                                                                                                 gAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCtggttg                                               <  1:551116/151‑1 (MQ=255)
                                                                                                    cTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCtggttggt                                             >  1:980320/1‑150 (MQ=255)
                                                                                                       gCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTggtaagg                                         >  2:556150/1‑151 (MQ=255)
                                                                                                        cGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTggtaaggt                                        >  1:769890/1‑151 (MQ=255)
                                                                                                           gtgtgtCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTggtaaggtaa                                      <  2:80331/150‑1 (MQ=255)
                                                                                                               gtCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGcc                                  <  1:502491/150‑1 (MQ=255)
                                                                                                                tCCCGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCg                                 >  2:1171544/1‑150 (MQ=255)
                                                                                                                  ccGTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGaa                               >  1:1069607/1‑150 (MQ=255)
                                                                                                                    gTGACACCAAGCTGGGTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAgg                            >  1:465496/1‑151 (MQ=255)
                                                                                                                                 gggTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCt                <  1:938026/150‑1 (MQ=255)
                                                                                                                                  ggTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGa              <  1:282682/151‑1 (MQ=255)
                                                                                                                                  ggTCCGGAAGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGa              <  2:185577/151‑1 (MQ=255)
                                                                                                                                         aaGAGATCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGAcccc          >  1:1065298/1‑148 (MQ=255)
                                                                                                                                            agaTCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCaga       >  1:1103860/1‑148 (MQ=255)
                                                                                                                                              aTCGCCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCAGAAGaaa  <  1:197911/151‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
AGCGTTCATGCCGTGGAATGGTTACAACTTCGAAGACTCCATCCTCGTATCCGAGCGTGTTGTTCAGGAAGACCGTTTCACCACCATCCACATTCAGGAACTGGCGTGTGTGTCCCGTGACACCAAGCTGGGTCCGGAAGAGATCACCGCTGACATCCCGAACGTGGGTGAAGCTGCGCTCTCCAAACTGGATGAATCCGGTATCGTTTACATTGGTGCGGAAGTGACCGGTGGCGACATTCTGGTTGGTAAGGTAACGCCGAAAGGTGAAACTCAGCTGACCCCAGAAGAAA  >  NC_000913/4183650‑4183942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A