Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F50 I1 R1
|
141 |
76.7 |
2402765 |
98.4% |
2364320 |
150.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,276,133 |
A→G |
K221K (AAA→AAG) |
yjcC → |
putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,276,133 | 0 | A | G | 100.0%
| 323.4
/ NA
| 91 | K221K (AAA→AAG) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (45/46); total (45/46) |
TGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTATCT > NC_000913/4275985‑4276280
|
tGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCg > 2:805012/1‑151 (MQ=255)
aaTGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGccc > 1:850134/1‑151 (MQ=255)
aTGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCa < 2:850148/151‑1 (MQ=255)
tGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCa > 2:670865/1‑150 (MQ=255)
ggggTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAAt < 2:421157/151‑1 (MQ=255)
gtgtgtATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGc > 2:201352/1‑151 (MQ=255)
tgtgtATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGc > 1:125526/1‑150 (MQ=255)
gtgtATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAg < 2:305552/151‑1 (MQ=255)
aTGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCAt > 2:71523/1‑151 (MQ=255)
gATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCAttg > 1:463708/1‑151 (MQ=255)
gATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCAttg > 2:582280/1‑151 (MQ=255)
gATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCAttg > 1:207657/1‑151 (MQ=255)
cGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGc > 2:58125/1‑151 (MQ=255)
cGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGc < 2:1087112/151‑1 (MQ=255)
gACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACt < 2:709505/151‑1 (MQ=255)
cGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTc > 2:658999/1‑151 (MQ=255)
ttttCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAAc < 2:292771/150‑1 (MQ=255)
tttCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACg < 2:481172/150‑1 (MQ=255)
cGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCtt < 1:917881/149‑1 (MQ=255)
cGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTtat < 1:832192/151‑1 (MQ=255)
gTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTtat > 1:177653/1‑150 (MQ=255)
tAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATaa < 1:1110130/150‑1 (MQ=255)
gCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAAccc > 1:346240/1‑150 (MQ=255)
aaaGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCAtt < 2:342384/151‑1 (MQ=255)
aaaGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCAtt < 2:1163721/151‑1 (MQ=255)
ggCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTtat < 1:281084/151‑1 (MQ=255)
gCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTtat > 2:891078/1‑150 (MQ=255)
cGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatc < 2:249032/150‑1 (MQ=255)
cGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatc > 1:741484/1‑150 (MQ=255)
cGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAat < 1:1146144/149‑1 (MQ=255)
ggCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatcat < 1:1128261/151‑1 (MQ=255)
ggCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatcat > 2:25344/1‑151 (MQ=255)
gcagcaACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAatcatc < 2:271033/151‑1 (MQ=255)
cagcaACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCt < 1:638117/151‑1 (MQ=255)
aaCGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTAtt > 2:678943/1‑151 (MQ=255)
cGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTAtttt > 2:578308/1‑151 (MQ=255)
gTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTAttttt > 1:467044/1‑151 (MQ=255)
tttCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTg < 1:95713/150‑1 (MQ=255)
ccGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGtt < 1:784995/149‑1 (MQ=255)
ccGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGt < 2:3637/148‑1 (MQ=255)
gATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCccg < 2:177655/149‑1 (MQ=255)
ttCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCccgccg < 2:394717/150‑1 (MQ=255)
ttCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCccgccg < 1:706409/150‑1 (MQ=255)
ttCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCccgccg > 1:394714/1‑150 (MQ=255)
tttGAAGGATTTACCCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTAt < 2:306317/150‑1 (MQ=255)
tttGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTAtt > 2:748638/1‑151 (MQ=255)
tttGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTAtt > 1:540254/1‑151 (MQ=255)
tttAAAGGTTTTAACCGTAAAAAAAAATGGTTTTTTATTTGCGACAGTTTTTTCGAAAAAGCCCCCATTTGCAGCCTTTGTTGCTATTTCATATCACCGTCTTATAACCCATTTTTATAATCATTTTATTTTTGCTTGGCCCGCCGGt < 1:606492/148‑1 (MQ=255)
ttGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTAttt > 1:424133/1‑151 (MQ=255)
tttAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGt > 1:639093/1‑151 (MQ=255)
tttAACCGTAAAAAAAAATGGTTATTTTTATGCAACGGTTTATTCGACAAAGCGCCCAATGGCAGCCATTGTTTCGACTTCATATAACCGTCTTATAACCCATTTTTATAATCATTTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAg < 2:360407/150‑1 (MQ=255)
ttAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGt < 2:838235/150‑1 (MQ=255)
ttAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGt < 1:540169/150‑1 (MQ=255)
ttAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTc > 1:874497/1‑151 (MQ=255)
aCCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTg < 2:169701/151‑1 (MQ=255)
aCCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTAATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCt < 1:448461/149‑1 (MQ=255)
ccGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTg < 2:547949/150‑1 (MQ=255)
ccGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGt < 2:893662/151‑1 (MQ=255)
cGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCTTTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGtt < 1:805001/151‑1 (MQ=255)
gTACAAATAAATGGCTATTTATATGCGACATTTTTTTCGACAAAGCTCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCTTTGCCCGCCGGTATTTTGGGGAGTCTTGtt < 2:407914/150‑1 (MQ=255)
aaGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCt > 1:354077/1‑150 (MQ=255)
aaGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCt > 1:337188/1‑150 (MQ=255)
aaatgattgtttATATGGGACAGTTTATTCGACATGGCGCCCAGTTGCAGCCTTTGTTCCGAATTCATATCAACGTTTTATAACCCTTTTTTATAATCATTTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTAt < 1:283372/140‑1 (MQ=255)
aaaTGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTAtt > 2:22553/1‑150 (MQ=255)
aaaTGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTAtt > 2:669420/1‑150 (MQ=255)
aaaTGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTAtt > 2:598647/1‑150 (MQ=255)
aaaTGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTa < 2:1011241/151‑1 (MQ=255)
tGGCTATTTATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTAct < 1:245329/150‑1 (MQ=255)
tATTTATATGCGACATTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCTTCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTg < 2:654887/149‑1 (MQ=255)
tttATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCt > 1:1100411/1‑150 (MQ=255)
ttATATGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTAc > 1:418710/1‑151 (MQ=255)
tataTGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTAc < 2:1042289/150‑1 (MQ=255)
tataTGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACg > 2:253070/1‑151 (MQ=255)
atatGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGt > 1:662480/1‑151 (MQ=255)
atatGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGt > 1:531532/1‑151 (MQ=255)
tatGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGt > 1:1145967/1‑150 (MQ=255)
tGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTa > 1:1045902/1‑149 (MQ=255)
tGCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTAtt > 1:16607/1‑151 (MQ=255)
gCGACAGTTTATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTc > 2:771885/1‑151 (MQ=255)
tttATTCGACAAAGCGCCCAATTGCAGCCATTTTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACaaa < 1:131727/150‑1 (MQ=255)
tttATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACaaa > 2:600030/1‑150 (MQ=255)
tttATTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACaa < 1:31541/149‑1 (MQ=255)
aTTCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACt > 2:452632/1‑150 (MQ=255)
tCGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAtt > 1:438285/1‑151 (MQ=255)
cGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAtt < 2:460250/150‑1 (MQ=255)
cGACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAtt < 2:278984/150‑1 (MQ=255)
cGACAAAGCCCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATACCCCATTTTTATAATCATCTTATTTTTGCGTTCCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAttt < 2:1059058/151‑1 (MQ=255)
gACAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAttt > 1:932855/1‑150 (MQ=255)
aCAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTAAAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTAt < 1:672166/147‑1 (MQ=255)
cAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTAtc > 1:842191/1‑151 (MQ=255)
cAAAGCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTAtc > 1:1125994/1‑151 (MQ=255)
aaagCGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTAtct > 1:28935/1‑151 (MQ=255)
|
TGCAATGGGGTGTGTATGATACGGTGACGAAAACCTTTTTCTCGTTAAGCAAAGAGGCCTCGGCAGCAACGTTTTCTCCGCTGATTCATTTGAAGGATTTAACCGTACAAAGAAATGGCTATTTATATGCGACAGTTTATTCGACAAAACGCCCAATTGCAGCCATTGTTGCGACTTCATATCAACGTCTTATAACCCATTTTTATAATCATCTTATTTTTGCGTTGCCCGCCGGTATTTTGGGGAGTCTTGTTCTGCTATTACTCTGGCTACGTATTCGACAAAACTATTTATCT > NC_000913/4275985‑4276280
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
