Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I1 R1
|
170 |
39.5 |
1266514 |
99.2% |
1256381 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
2,636,790 |
(TTC)3→2 |
coding (565‑567/1473 nt) |
der ← |
GTPase; multicopy suppressor of ftsJ |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
2636782 |
2636784 |
3 |
39 [0] |
[0] 39 |
der |
GTPase; multicopy suppressor of ftsJ |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
2636785 = | 0 (0.000) | 38 (1.000) |
38/282 |
0.2 |
100% |
coding (572/1473 nt) |
der |
GTPase; multicopy suppressor of ftsJ |
| ? | NC_000913 |
= 2636781 |
0 (0.000) | coding (576/1473 nt) |
der |
GTPase; multicopy suppressor of ftsJ |
GATK/CNVnator alignment
N/A
