Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I2 R1
|
121 |
82.0 |
2593086 |
97.7% |
2533445 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,578,549 |
A→G |
C263C (TGT→TGC) |
mcrB ← |
5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,578,549 | 0 | A | G | 99.2%
| 479.0
/ NA
| 121 | C263C (TGT→TGC) | mcrB | 5‑methylcytosine‑specific restriction enzyme McrBC, subunit McrB |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (70/50); total (70/51) |
| Fisher's exact test for biased strand distribution p-value = 4.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 121 total aligned reads displayed.
GTTAGGGGAACAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTAAGC > NC_000913/4578406‑4578695
|
gTTAGGGGAACAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAAt > 2:213288/1‑151 (MQ=255)
tAGGGGAACAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAAtt < 1:215844/150‑1 (MQ=255)
gAACAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCGTTAGCTTGCTGGCAAAAATTGTaaaa < 2:939724/151‑1 (MQ=255)
aCAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAata < 2:798246/151‑1 (MQ=255)
gTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCt < 2:1223834/151‑1 (MQ=255)
ttttCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCtt > 2:198701/1‑151 (MQ=255)
tttCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCtt < 2:351566/150‑1 (MQ=255)
tCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTa < 1:1165517/150‑1 (MQ=255)
cACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTAc < 2:59237/150‑1 (MQ=255)
cACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACg < 2:167080/151‑1 (MQ=255)
ccTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTc > 2:1287830/1‑151 (MQ=255)
cTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCg > 1:969166/1‑151 (MQ=255)
cGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCg < 2:144107/149‑1 (MQ=255)
cGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGa < 2:860103/151‑1 (MQ=255)
gTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGaa < 1:207533/151‑1 (MQ=255)
gTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGaa < 1:958090/151‑1 (MQ=255)
gTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGa > 1:823163/1‑150 (MQ=255)
ttATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGc > 1:679756/1‑151 (MQ=255)
ttATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGc > 1:368655/1‑151 (MQ=255)
ttATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGc > 2:316572/1‑151 (MQ=255)
tATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGcc > 2:198051/1‑151 (MQ=255)
tATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGc < 2:591911/150‑1 (MQ=255)
tATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGc < 2:1260510/150‑1 (MQ=255)
aTCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCg > 1:848997/1‑151 (MQ=255)
aTCATGTACCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCg > 1:791949/1‑151 (MQ=255)
cATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGAc > 2:894251/1‑151 (MQ=255)
aTGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACg > 1:752209/1‑151 (MQ=255)
ttCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGcc > 1:657498/1‑150 (MQ=255)
ccATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCAtt > 2:281770/1‑151 (MQ=255)
cATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTc < 2:716796/151‑1 (MQ=255)
aTTAACATCATCACTTCGCCAAATACTTAACTGAGATTGGCACGATTGATGTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCCCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTTCGTCGGAAGCCGACGCCa < 1:1149933/147‑1 (MQ=255)
aaCATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATCCGGAc < 1:137282/151‑1 (MQ=255)
aCATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACg > 1:1193183/1‑151 (MQ=255)
catcatCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACg > 1:641196/1‑150 (MQ=255)
tcatcaCTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGAt > 1:346513/1‑150 (MQ=255)
tcatcaCTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGAt > 1:45375/1‑150 (MQ=255)
aCTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCt < 1:10160/151‑1 (MQ=255)
ttCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGt > 2:1015766/1‑151 (MQ=255)
ttCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGt > 1:1079538/1‑151 (MQ=255)
tCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGt > 2:41703/1‑150 (MQ=255)
cGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGtat < 1:915383/151‑1 (MQ=255)
cGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGtat < 1:352512/151‑1 (MQ=255)
ccAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATaa < 1:505167/151‑1 (MQ=255)
cAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATaaa < 2:543264/151‑1 (MQ=255)
tACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATcc > 2:352089/1‑151 (MQ=255)
aCTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCt > 1:474506/1‑151 (MQ=255)
aCTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCt > 1:537038/1‑151 (MQ=255)
ttACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTc < 1:33550/149‑1 (MQ=255)
ttACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCa < 1:494817/150‑1 (MQ=255)
aCTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTCTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCAt > 2:702659/1‑149 (MQ=255)
cTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGc > 1:216463/1‑151 (MQ=255)
gagaTTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCt > 1:1277667/1‑150 (MQ=255)
agaTTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCtat > 1:952134/1‑151 (MQ=255)
aTTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCtata > 1:672305/1‑150 (MQ=255)
ggCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCtata > 2:907353/1‑147 (MQ=255)
cACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTg > 2:26629/1‑151 (MQ=255)
gattgattTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATg < 1:486200/151‑1 (MQ=255)
tgattTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGa < 2:365418/150‑1 (MQ=255)
gattTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGaa < 2:778987/150‑1 (MQ=255)
gattTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAAc > 2:1057497/1‑151 (MQ=255)
ttCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTg > 1:1242605/1‑150 (MQ=255)
cATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAAc > 2:587425/1‑151 (MQ=255)
cTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCat > 1:170283/1‑151 (MQ=255)
ataataAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCatat > 2:217382/1‑151 (MQ=255)
ataataAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCa < 2:396555/148‑1 (MQ=255)
aataaAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATAtt < 2:1277708/150‑1 (MQ=255)
ataaAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTg > 1:90930/1‑150 (MQ=255)
taaCAAAATACTTTCGCTCTGGCTGCTCTTTAGCTCTCTGGCAAAAATTGTAAAATATGCCGTATTTTTGTCGGAAGCAGACGCAATTCCGACGATAGCCATGTATAAAATCCTCATAGCTATAAGATTGATGGTACTGAACCATATTGAc > 1:887089/1‑151 (MQ=255)
taaAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAc > 2:771797/1‑151 (MQ=255)
taaAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAc > 2:1017353/1‑151 (MQ=255)
aaaaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGAcgc > 2:524091/1‑151 (MQ=255)
aaTATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGt > 1:806773/1‑151 (MQ=255)
atatACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGtt < 2:504698/151‑1 (MQ=255)
tataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTg > 1:578878/1‑151 (MQ=255)
ataCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGc > 1:532799/1‑151 (MQ=255)
aCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCgg < 2:1147980/151‑1 (MQ=255)
aCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCg < 1:213284/150‑1 (MQ=255)
aCTTTTTCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCg < 2:536364/150‑1 (MQ=255)
tttttCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCgg > 2:546860/1‑149 (MQ=255)
ttttCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGa < 2:51779/149‑1 (MQ=255)
tttCTCTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGcc > 2:1197209/1‑151 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 1:404862/1‑151 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 2:93844/1‑151 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 2:470224/1‑151 (MQ=255)
tctcTGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt > 2:281947/1‑151 (MQ=255)
ctctGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCttt > 2:475060/1‑151 (MQ=255)
ctGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCttt < 2:243317/149‑1 (MQ=255)
ctGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCtt < 2:663530/148‑1 (MQ=255)
tGGCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTtct > 2:34566/1‑151 (MQ=255)
ggCTGCTCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTtc < 2:115313/149‑1 (MQ=255)
gctgctCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTcc < 2:430261/151‑1 (MQ=255)
tgctCTTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTg > 2:1197524/1‑151 (MQ=255)
ctTTAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTc > 2:851801/1‑149 (MQ=255)
tttAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGc > 1:1271908/1‑151 (MQ=255)
ttAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAg < 1:309735/149‑1 (MQ=255)
tAGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCa > 2:871783/1‑150 (MQ=255)
aGCTTGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCaa < 2:1276203/150‑1 (MQ=255)
ttGCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTa > 1:950770/1‑150 (MQ=255)
gCTGGCAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTAAGc > 2:711589/1‑151 (MQ=255)
tGACAAAAATTGTAAAATATGCCGGCTTTATGTCGGAAGCCGACGCTATTCGGACGATAGCCCTGTATAAAAGCCTCATGGCTATAAGATTGATGCAGCTGACCCATAGACACGCGTTGCTGAGCGTTTTGACCTGTCAGCCAGTAAgt < 1:271593/149‑2 (MQ=255)
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GTTAGGGGAACAGACCAGTTTTCACCTCGTTTATCATGTTCCATTAACATCATCACTTCGCCAAATACTTTACTGAGATTGGCACGATTGATTTCATCTATAATAAAAATATACTTTTTCTCTGGCTGCTCTTTAGCTTGCTGACAAAAATTGTAAAATATGCCGTCTTTACGTCGGAAGCCGACGCCATTCGGACGATAGCCCTGTATAAAATCCTCATAGCTATAAGATTGATGGAACTGAACCATATTGACGCGTTGCGGAGCCTTTTCTCCTGTCAGCAAGTAAGC > NC_000913/4578406‑4578695
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
