Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,148,553 A→G R311R (CGA→CGG)  plsX → putative phosphate acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,148,5530AG100.0% 224.8 / NA 62R311R (CGA→CGG) plsXputative phosphate acyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (31/31);  total (31/31)

GTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCT  >  NC_000913/1148409‑1148700
                                                                                                                                                |                                                                                                                                                   
gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCtttt                                                                                                                                               <  2:413816/151‑1 (MQ=255)
gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCtttt                                                                                                                                               >  2:631036/1‑151 (MQ=255)
gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCtttt                                                                                                                                               >  2:659599/1‑151 (MQ=255)
gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCtttt                                                                                                                                               >  1:954325/1‑151 (MQ=255)
gtggtgGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCtttt                                                                                                                                               <  1:510061/151‑1 (MQ=255)
           tGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGAt                                                                                                                                    >  2:453669/1‑151 (MQ=255)
            gTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGAt                                                                                                                                    <  1:380823/150‑1 (MQ=255)
            gTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGAt                                                                                                                                    <  1:556482/150‑1 (MQ=255)
              tattaAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCATTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTg                                                                                                                                  >  2:602557/1‑150 (MQ=255)
                   aaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAgg                                                                                                                            <  2:160322/151‑1 (MQ=255)
                   aaGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAgg                                                                                                                            <  2:801762/151‑1 (MQ=255)
                      cGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAg                                                                                                                         <  2:742084/151‑1 (MQ=255)
                          ggCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGc                                                                                                                      >  1:408267/1‑150 (MQ=255)
                             tACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGc                                                                                                                  >  2:1002544/1‑151 (MQ=255)
                              aCAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGc                                                                                                                  <  2:995180/150‑1 (MQ=255)
                              aCAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCg                                                                                                                 >  2:204756/1‑151 (MQ=255)
                                aaaaGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGt                                                                                                               >  1:755381/1‑151 (MQ=255)
                                 aaaGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGt                                                                                                               >  2:903331/1‑150 (MQ=255)
                                  aaGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGc                                                                                                             <  1:385650/151‑1 (MQ=255)
                                    gagCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAg                                                                                                           <  1:740333/151‑1 (MQ=255)
                                          gACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACaa                                                                                                     <  2:270784/151‑1 (MQ=255)
                                                   aTTCAGTCACCTCAACCCCGACCAGTATAACGGCGCTTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGATGCAGCGAATCAGCGGGCTTTTGCGGTCGCGATTGAACTGGCAGTGCAGGCGGTGCAGCGACAAGTTCTTCAg                                                                                            <  1:830562/151‑1 (MQ=255)
                                                     tCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCg                                                                                          >  1:805015/1‑151 (MQ=255)
                                                         tCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTTCTCAGCGaa                                                                                        >  1:918885/1‑149 (MQ=255)
                                                              tCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGc                                                                                 >  2:946592/1‑151 (MQ=255)
                                                               cAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCg                                                                                  <  1:594481/149‑1 (MQ=255)
                                                               cAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCg                                                                                  <  1:157617/149‑1 (MQ=255)
                                                                     cGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTg                                                                          <  1:25018/151‑1 (MQ=255)
                                                                      gACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGAGACAAATTCCTCAGGGGATTGCCGCCCGCCTgg                                                                         >  2:811657/1‑151 (MQ=255)
                                                                        ccAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGaa                                                                       <  2:780835/151‑1 (MQ=255)
                                                                         cAGTATAACGGCGCCTGTCTGTTATGATTGCGCGTCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGTTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGCCAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAAt                                                                      <  2:222365/151‑1 (MQ=255)
                                                                           gTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCt                                                                    >  2:844899/1‑151 (MQ=255)
                                                                           gTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCt                                                                    <  2:723356/151‑1 (MQ=255)
                                                                                  ggCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATAcc                                                             <  1:1002569/151‑1 (MQ=255)
                                                                                     gcCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAg                                                          <  2:135459/151‑1 (MQ=255)
                                                                                       ctgtctgtTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCt                                                        >  1:610269/1‑151 (MQ=255)
                                                                                        tgtctgtTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTg                                                       >  2:733392/1‑151 (MQ=255)
                                                                                             gtTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGt                                                     <  1:753086/148‑1 (MQ=255)
                                                                                                 ggATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAgc                                              >  1:686198/1‑151 (MQ=255)
                                                                                                 ggATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAgc                                              <  1:679197/151‑1 (MQ=255)
                                                                                                   aTTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAgct                                             >  1:279292/1‑150 (MQ=255)
                                                                                                      gcgcGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGctgctg                                         <  2:433249/151‑1 (MQ=255)
                                                                                                       cgcggcgcggTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTgg                                        <  1:477252/151‑1 (MQ=255)
                                                                                                          ggCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACg                                     >  1:718217/1‑151 (MQ=255)
                                                                                                            cACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGGGCAGCGACAAGTTCCTCAGCGAATTGCCGCCCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACgg                                    >  1:99031/1‑150 (MQ=255)
                                                                                                              cGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTgg                                 >  1:996386/1‑151 (MQ=255)
                                                                                                                gTGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTgg                                 >  2:816974/1‑149 (MQ=255)
                                                                                                                 tGATAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCa                               >  1:1057443/1‑150 (MQ=255)
                                                                                                                   aTAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCaaa                             >  2:76474/1‑150 (MQ=255)
                                                                                                                   aTAAAAAGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGGGGCaaa                             >  2:368311/1‑150 (MQ=255)
                                                                                                                       aaaGTCATGGTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCgg                        <  1:453638/151‑1 (MQ=255)
                                                                                                                               ggTGCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTg                 <  1:798663/150‑1 (MQ=255)
                                                                                                                                  gCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCgg              >  1:568543/1‑150 (MQ=255)
                                                                                                                                  gCAGCCAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGt             <  1:457295/151‑1 (MQ=255)
                                                                                                                                      ccAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCa         <  1:325702/151‑1 (MQ=255)
                                                                                                                                       cAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAg           >  2:8903/1‑148 (MQ=255)
                                                                                                                                       cAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGc          >  1:934103/1‑149 (MQ=255)
                                                                                                                                       cAATCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAg        <  2:663432/151‑1 (MQ=255)
                                                                                                                                        aaTCAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAgg       >  1:1020392/1‑151 (MQ=255)
                                                                                                                                           cAGCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGAc     <  2:94432/150‑1 (MQ=255)
                                                                                                                                             gCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGc   >  1:652458/1‑150 (MQ=255)
                                                                                                                                             gCGGGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCt  <  2:353479/151‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
GTGGTGGCTACTGTTATTAAAGCGTTGGCTACAAAAGAGCCTGACGAGGCGATTCAGTCACCTCAACCCCGACCAGTATAACGGCGCCTGTCTGTTAGGATTGCGCGGCACGGTGATAAAAAGTCATGGTGCAGCCAATCAGCGAGCTTTTGCGGTCGCGATTGAACAGGCAGTGCAGGCGGTGCAGCGACAAGTTCCTCAGCGAATTGCCGCTCGCCTGGAATCTGTATACCCAGCTGGTTTTGAGCTGCTGGACGGTGGCAAAAGCGGAACTCTGCGGTAGCAGGACGCT  >  NC_000913/1148409‑1148700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A