Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F50 I2 R1
|
139 |
64.5 |
2139856 |
92.7% |
1983646 |
149.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,240,984 |
(G)7→8 |
coding (1041/1245 nt) |
sstT → |
sodium:serine/threonine symporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,240,977 | 1 | . | G | 95.0%
| 212.8
/ 3.9
| 60 | coding (1034/1245 nt) | sstT | sodium:serine/threonine symporter |
| Reads supporting (aligned to +/- strand): ref base . (0/3); new base G (28/29); total (28/32) |
| Fisher's exact test for biased strand distribution p-value = 2.41e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCATCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACG > NC_000913/3240833‑3241120
|
ccaTCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGTC‑gggggg < 2:205623/151‑1 (MQ=255)
cAATATGGCGGGAGCGCCAAAAACTATTACCGTTGTGGCGCTGGCTGCGGTTGATATGATGGGTATTTCTGTCGACTTGCCCACCGCGCTGCCGTTTGGAGGGGGGGGTTCTCTGTGTGCCTGTGGCGCATCCCGCCTggg‑gggggggggg > 2:179993/1‑148 (MQ=255)
atGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTctg < 1:191196/151‑1 (MQ=255)
ggcgggcgCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTctgct < 1:580639/151‑1 (MQ=255)
ggcgggcgCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTctgc < 2:119682/150‑1 (MQ=255)
agcaATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTTTTCTGGTGAT‑ccc > 2:462994/1‑151 (MQ=255)
agcaATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCCCTGCTGCTGAT‑ccc > 1:378216/1‑151 (MQ=255)
caATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCAc < 2:637828/151‑1 (MQ=255)
caATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCAc < 1:747189/151‑1 (MQ=255)
aTCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTg < 2:536818/151‑1 (MQ=255)
tACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGGTGAT‑CCCCCTGGCCTGt > 2:805106/1‑149 (MQ=255)
tgtTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑ACCACCTGGCTGTaa > 2:908585/1‑146 (MQ=255)
tgtTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCCCTGCTGCTGAA‑CCCACCGGCCGGTTatat > 2:955447/1‑149 (MQ=255)
ttGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGGT‑CCCACTGGCCTGTAATAtttt > 1:95336/1‑150 (MQ=255)
tGACGCTGGCTGCGGTTGATACGCTGGGTATTCCGGTCGATCTGCCCTCGGCGCTGCTGTTGAGCGTGGTGGCTTCGCTGTGTGCCTGTGGCGCATACGGCTTGGC‑GGGGGGGCTCTCTGCTGCTGAT‑CCCACTAGCCTGTAatat < 2:187499/146‑1 (MQ=255)
gACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCgg < 1:277641/151‑1 (MQ=255)
gACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCgg < 2:111234/151‑1 (MQ=255)
gACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCgg < 2:559287/150‑1 (MQ=255)
gctggctgCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCCGtct > 1:603364/1‑149 (MQ=255)
tggctgCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACCGGCCTGTAATATGTTCGGTAttt > 2:1069256/1‑151 (MQ=255)
ctgCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTTGGTATTTCg > 1:9474/1‑150 (MQ=255)
gCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACCGGCCTGTAATATGTTTGGGATTTCgga > 1:1044293/1‑148 (MQ=255)
ggTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑TCCACTGGCCTGTAATATGTTTGGTATTTCGAAc > 1:948620/1‑149 (MQ=255)
ggTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGGATTTCGAACg > 1:423060/1‑150 (MQ=255)
aaTACGCTGGGTATTCCGTTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGTTCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGatat < 2:173657/150‑1 (MQ=255)
aaTACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGatat < 1:379212/150‑1 (MQ=255)
aTACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCCCTGGCCTGTAATATGTTCGGGATTTCGAACGatat > 2:775264/1‑149 (MQ=255)
cGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCa < 2:972643/151‑1 (MQ=255)
cGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTTCTTCTGAT‑TCCCCTTGCCTGTCAAATGTTTGGGATTTTGCACGGTATccgc > 2:824951/1‑147 (MQ=255)
cTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTCCTGCTGAT‑CACACTGGCCTTTAATATTTTCGGGATTTTGAACGCTATCGCCa > 2:640364/1‑149 (MQ=255)
tGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTTGCCTGTAATATGTTCGGGATTTCGAACGATATCGcc > 1:564720/1‑147 (MQ=255)
gTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCCGGTGGT‑CCCCCTTGCCTCTCATATGTTCGGGATTTCGAACGATTTCGCCCTg > 2:229222/1‑147 (MQ=255)
aTTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAggt < 1:787748/150‑1 (MQ=255)
aTTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAggt < 1:779993/150‑1 (MQ=255)
ttCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCCCTGGCCTGTAATATGTTCGGGATTTCGAACGATATCGCCCTGCAggtgg > 2:856610/1‑151 (MQ=255)
ccGGTGGGTCTGCCCACGGCGCTGCTGTGGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCGTCCGGCGTGGCGGGGGGGG‑TGTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGtt < 2:216057/151‑1 (MQ=255)
ggTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAata < 2:432100/111‑1 (MQ=255)
tCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGGT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGGGGGTgtc > 2:1064959/1‑148 (MQ=255)
cGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACCGGCCTGTAATATGTTCGGGATTTCGAACGATATCGCCATGCAGGTGGTTGCCg > 1:806451/1‑150 (MQ=255)
tCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑TCCACTGGCCTGTAATATGTTCGGGATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCgg > 1:195353/1‑151 (MQ=255)
tGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGCCTGTTATATGTTCGGGATTTCGAACGATATCGCCCTGCAGGTGGGTGCCG‑TCgg > 2:308092/1‑149 (MQ=255)
gCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGGT‑TCCACTGGGCTGTAATATGTTCGGTATTTCGAACGGTATCGCCCTGCAGGTGGTTGCCG‑TCGGCtt > 1:421767/1‑151 (MQ=255)
gCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑Tc < 1:377487/146‑1 (MQ=255)
gCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑Tc < 2:489625/146‑1 (MQ=255)
gCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCt < 2:942338/150‑1 (MQ=255)
tggCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTTGGGATTTTGAACGATATCGCCCTGCAGGTGGGTGCCG‑TCGGCttttt > 2:46799/2‑147 (MQ=255)
cgcTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCg < 1:775306/151‑1 (MQ=255)
gctgctGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCgg < 2:466966/151‑1 (MQ=255)
gctgctGTTGAGCGTGGTGGCTTCGCTGTGGGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGGTGCTGATACCAACTGG‑CTGTTATTTTTTTGGGTTTTTGGACGATATCGGCACGCAGGGGGGTGGCGTTCGGCttatca > 2:463037/1‑143 (MQ=255)
tgctgTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑GCTCTGCTGCTGAT‑CCCACTGGGCTGTAATATGTTCGGGATTTTGAAAGATATCGCCATGCAGGTGGGTGGCG‑TCGGCTTTttcatctggg > 2:73434/1‑147 (MQ=255)
gctgTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGc < 1:908632/149‑1 (MQ=255)
gctgTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGt < 1:313852/151‑1 (MQ=255)
aGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAg < 1:638109/151‑1 (MQ=255)
aGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAg < 1:446484/151‑1 (MQ=255)
tctcTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCCCTGGCCTGTAATATGTTCGGTATTTCGAGCGATATCGCCATGCAGGTGGTTGCCG‑TCGGCGTTATCATCGGCGTATTGCAGGACTCTTg < 2:86336/147‑1 (MQ=255)
cTGTGGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTTGAAAGATATCGCCATGCAGGGGGGTGCCG‑TCGGCTTTTTCATCCGCGTATTGCAGGAATCTTGCGaaa > 1:683679/1‑141 (MQ=255)
gtgGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGaa < 1:803814/149‑1 (MQ=255)
tgGCGCATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGGATTTCGAACGATATCGCCATGCAGGTGGGTGCCG‑TCGGCTTTTTTATCGGCGTATTGCAGGACCCTTGCGAAAACGCGCTGaa > 1:951703/1‑148 (MQ=255)
cgcATCCGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCtt < 2:195350/150‑1 (MQ=255)
ccGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACt < 2:475445/150‑1 (MQ=255)
cGGCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGa < 2:344669/151‑1 (MQ=255)
gCGTGGCGGGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACg < 1:229247/151‑1 (MQ=255)
|
CCATCAATATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGG‑TCTCTGCTGCTGAT‑CCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCG‑TCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTGAACTCTTCAACTGACG > NC_000913/3240833‑3241120
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
