Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,161,466 G→A G115S (GGC→AGC)  fabR → transcriptional repressor of fabA and fabB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,161,4660GA100.0% 257.2 / NA 68G115S (GGC→AGC) fabRtranscriptional repressor of fabA and fabB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (32/36);  total (32/36)

GAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTCAG  >  NC_000913/4161318‑4161611
                                                                                                                                                    |                                                                                                                                                 
gagCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGc                                                                                                                                                 <  1:477797/151‑1 (MQ=255)
   cGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCAcc                                                                                                                                              >  1:120562/1‑151 (MQ=255)
       ttAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTcc                                                                                                                                           <  1:270816/150‑1 (MQ=255)
            gCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCg                                                                                                                                     <  1:133051/151‑1 (MQ=255)
               aCGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGttt                                                                                                                                  >  1:1059292/1‑151 (MQ=255)
                        cATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCCCATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTgccgcc                                                                                                                         >  2:569197/1‑151 (MQ=255)
                        cATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTgccgcc                                                                                                                         >  1:161607/1‑151 (MQ=255)
                            cgcCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTg                                                                                                                     <  2:253391/151‑1 (MQ=255)
                             gcCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTgc                                                                                                                    <  2:120560/151‑1 (MQ=255)
                              ccAGGCGCGTCCGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTGCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGCTTCGTGCCGCCGTTgcg                                                                                                                   >  2:154573/1‑151 (MQ=255)
                               cAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTgcgc                                                                                                                  >  1:172888/1‑151 (MQ=255)
                               cAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTgcgc                                                                                                                  <  1:244723/151‑1 (MQ=255)
                                  gcgcGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTg                                                                                                               <  1:907072/151‑1 (MQ=255)
                                  gcgcGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTg                                                                                                               <  2:936141/151‑1 (MQ=255)
                                      gTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAAt                                                                                                           >  1:602399/1‑151 (MQ=255)
                                              aTCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACt                                                                                                   <  1:800307/151‑1 (MQ=255)
                                                   ccaaGGCGGGAGTGTGATCCGCCCCTCGGTCTCCACATTTATGGAGTTCATCGGTAATCATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCGCCTCCGCTGCGTTTCGTGCCCCCGTTGCGCGTGAAATTCAGCACTTCa                                                                                                <  2:34545/147‑1 (MQ=255)
                                                   cAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCAtt                                                                                              >  1:226210/1‑151 (MQ=255)
                                                     aaGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTg                                                                                             >  2:952303/1‑150 (MQ=255)
                                                       ggCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCgg                                                                                          >  1:864215/1‑151 (MQ=255)
                                                         tgggAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGAAATAATCCTAACGCCTTCCGGTTATTATTGAGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGa                                                                                         >  2:705902/2‑150 (MQ=255)
                                                         cGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGaa                                                                                        <  2:1022544/151‑1 (MQ=255)
                                                          gggAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAAc                                                                                       >  2:38373/1‑151 (MQ=255)
                                                           ggAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACt                                                                                      <  2:304018/151‑1 (MQ=255)
                                                             aGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTg                                                                                    <  1:248087/151‑1 (MQ=255)
                                                              gtgtGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGc                                                                                   <  2:370606/151‑1 (MQ=255)
                                                                gtgATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCgg                                                                                 >  2:821111/1‑151 (MQ=255)
                                                                gtgATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCgg                                                                                 >  1:36210/1‑151 (MQ=255)
                                                                     ccGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTAt                                                                            >  1:1050415/1‑151 (MQ=255)
                                                                        cACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCt                                                                          <  2:513647/150‑1 (MQ=255)
                                                                          ccTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTgg                                                                        >  1:433422/1‑150 (MQ=255)
                                                                           cTCGGTCTGCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGCTTATTATCGCGGGACCGCTCAAGCACCTACGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCTGACCTTGCGGACTATCTgg                                                                        <  2:337649/149‑1 (MQ=255)
                                                                            tCGGTCTACACATTTATGGAGTTAATAAGTAATAATCCTAACGCCTTCCGGGTATTATTGCGGGAACTCTCGAGCACCTCCGCTACGTATCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCAGAACTTGCGGATTATCTg                                                                         <  2:603931/147‑1 (MQ=255)
                                                                                 ctcCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGa                                                                 >  1:521730/1‑150 (MQ=255)
                                                                                   ccACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGaaaa                                                              <  2:148036/151‑1 (MQ=255)
                                                                                   ccACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGa                                                                 <  1:102609/148‑1 (MQ=255)
                                                                                         ttATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCatat                                                        >  1:470465/1‑151 (MQ=255)
                                                                                         ttATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCata                                                         <  1:648506/150‑1 (MQ=255)
                                                                                           aTGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGc                                                      <  1:323300/151‑1 (MQ=255)
                                                                                             ggAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCcg                                                    >  2:988287/1‑151 (MQ=255)
                                                                                                 ttCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCgcgtg                                                >  2:320768/1‑151 (MQ=255)
                                                                                                    aTCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTTCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCgcgtgcgt                                             <  2:509985/151‑1 (MQ=255)
                                                                                                      cGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGttt                                           >  2:399819/1‑151 (MQ=255)
                                                                                                           ataatCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTg                                       >  1:759860/1‑150 (MQ=255)
                                                                                                             aatCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGaa                                     <  1:933395/150‑1 (MQ=255)
                                                                                                             aatCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGa                                      >  2:762780/1‑149 (MQ=255)
                                                                                                             aatCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGa                                      >  1:659733/1‑149 (MQ=255)
                                                                                                               tCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAgcg                                  >  2:1941/1‑151 (MQ=255)
                                                                                                               tCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGATTCGTGCCGCCGTTGCGCGGGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGGTTACTGAAgcg                                  >  2:293645/1‑151 (MQ=255)
                                                                                                                  tAACGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCa                                >  1:543256/1‑150 (MQ=255)
                                                                                                                     cGCCTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGcc                            <  1:678037/151‑1 (MQ=255)
                                                                                                                        cTTCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGa                          >  1:574525/1‑150 (MQ=255)
                                                                                                                          tCCGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGaa                         <  2:261472/149‑1 (MQ=255)
                                                                                                                           ccGGTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGc                       <  1:444344/150‑1 (MQ=255)
                                                                                                                             ggTTATTATTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAAt                    >  2:279386/1‑151 (MQ=255)
                                                                                                                                tattatTGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATgg                  <  2:859092/150‑1 (MQ=255)
                                                                                                                                 attattGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGt                 <  1:1036132/150‑1 (MQ=255)
                                                                                                                                 attattGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTg                <  1:116884/151‑1 (MQ=255)
                                                                                                                                     ttGCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACa             >  2:889534/1‑150 (MQ=255)
                                                                                                                                      tGCGGGAACGCTCCAGCACCTCCGCTGAGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGCACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGAAATGGTGACAAt           >  2:967490/1‑151 (MQ=255)
                                                                                                                                       gCGGGAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAAtt          <  2:775948/151‑1 (MQ=255)
                                                                                                                                         gggAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGt        <  1:938762/151‑1 (MQ=255)
                                                                                                                                         gggAACGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGt        <  1:502266/151‑1 (MQ=255)
                                                                                                                                            aaCGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCtt     <  2:758248/151‑1 (MQ=255)
                                                                                                                                             aCGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGGCGAAGCAATGGTGACAATTGTCTTc    <  2:809002/151‑1 (MQ=255)
                                                                                                                                              cGCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCtt     <  2:981155/149‑1 (MQ=255)
                                                                                                                                               gCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTc    >  2:188548/1‑149 (MQ=255)
                                                                                                                                               gCTCCAGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTCAg  <  2:161605/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GAGCGGTTTAATGCTACGCCAACTCATGCGCCAGGCGCGTCAGCGTATCGCCAAAGGCGGGAGTGTGATCCGCACCTCGGTCTCCACATTTATGGAGTTCATCGGTAATAATCCTAACGCCTTCCGGTTATTATTGCGGGAACGCTCCGGCACCTCCGCTGCGTTTCGTGCCGCCGTTGCGCGTGAAATTCAGCACTTCATTGCGGAACTTGCGGACTATCTGGAACTCGAAAACCATATGCCGCGTGCGTTTACTGAAGCGCAAGCCGAAGCAATGGTGACAATTGTCTTCAG  >  NC_000913/4161318‑4161611

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A