Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,480,837 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,480,8370AT100.0% 594.0 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (117/133);  total (117/133)
*CP0425831,480,8380CG100.0% 600.7 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (117/133);  total (117/133)
*CP0425831,480,8390TA99.6% 584.3 / NA 250intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (117/130);  total (117/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 250 total aligned reads displayed.

TGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCACTCGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGACTCATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCA  >  CP042583/1480557‑1481118
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
 ggTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTgg                                                                                                                                                                                                                                                                                  <  1:841172/289‑1 (MQ=255)
      gggTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCCCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAAt                                                                                                                                                                                                                                                                             >  1:1412709/1‑289 (MQ=255)
        gTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATg                                                                                                                                                                                                                                                                            >  1:1931996/1‑288 (MQ=255)
        gTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATg                                                                                                                                                                                                                                                                            >  1:986071/1‑288 (MQ=255)
         tAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATgg                                                                                                                                                                                                                                                                           >  1:1832876/1‑288 (MQ=255)
          aaCCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGgc                                                                                                                                                                                                                                                                          <  2:1832876/288‑1 (MQ=255)
           aCCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGgcc                                                                                                                                                                                                                                                                         >  1:601850/1‑288 (MQ=255)
            ccGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAACATTCGACGCGCACATTACCTAACGCGGCAACATCTGACGCCCGCCTAATGgccg                                                                                                                                                                                                                                                                        >  2:305084/1‑288 (MQ=255)
                 tGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTc                                                                                                                                                                                                                                                                   >  1:1701341/1‑288 (MQ=255)
                         gccgTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCa                                                                                                                                                                                                                                                          <  2:1223088/289‑1 (MQ=255)
                          ccgTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCa                                                                                                                                                                                                                                                          >  2:20693/1‑288 (MQ=255)
                           cgTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAAc                                                                                                                                                                                                                                                        <  2:2074828/289‑1 (MQ=255)
                           cgTTTTCAAGGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAAc                                                                                                                                                                                                                                                        <  2:506708/289‑1 (MQ=255)
                                   aggccacggcCGGGCAGGGGGACATCAAGCGTTTCCGCCGCCAGACGCACATTCAGGGCAGCGCTTTGCAGTTCCGCGTTACGCGCATTCAGCGCCTGCTGGACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTg                                                                                                                                                                                                                                                <  2:931663/284‑1 (MQ=255)
                                   aTGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTg                                                                                                                                                                                                                                                <  1:1152952/289‑1 (MQ=255)
                                         cgacCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGAt                                                                                                                                                                                                                                          >  1:2175259/1‑289 (MQ=255)
                                              tggcaggaggaCATCAATCGTTTCCGCCGCCAGACGCGCATTCATTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCG‑ACTGGCAACCAGTTCTGCGAGATgtgaca                                                                                                                                                                                                                                    <  1:305084/280‑6 (MQ=255)
                                              tGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATgtgac                                                                                                                                                                                                                                     >  1:451505/1‑285 (MQ=255)
                                               ggCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATgtga                                                                                                                                                                                                                                      >  2:596076/1‑284 (MQ=255)
                                                      agaCATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGttt                                                                                                                                                                                                                              >  2:564965/1‑288 (MQ=255)
                                                      agaCATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACCCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGCTgttcactggttt                                                                                                                                                                                                                              >  2:5859/1‑277 (MQ=255)
                                                         cATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCt                                                                                                                                                                                                                          <  1:415004/289‑1 (MQ=255)
                                                          aTCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTc                                                                                                                                                                                                                         >  2:1216700/1‑289 (MQ=255)
                                                          aTCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCCCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCTGCCTTCGCACTGGCAGCCACTTCTGCGAGCTGTGCCCTGGTTTTCCt                                                                                                                                                                                                                          >  2:1270267/1‑288 (MQ=255)
                                                           tCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCa                                                                                                                                                                                                                        <  1:871600/289‑1 (MQ=255)
                                                              aTCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGt                                                                                                                                                                                                                                >  1:1998010/1‑278 (MQ=255)
                                                                    tCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAg                                                                                                                                                                                                               >  2:979535/1‑289 (MQ=255)
                                                                      cgccgcCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAgtg                                                                                                                                                                                                             >  2:170710/1‑289 (MQ=255)
                                                                      cgccgcCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAgtg                                                                                                                                                                                                             <  2:700486/289‑1 (MQ=255)
                                                                                cgcgCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTg                                                                                                                                                                                                    <  2:1758857/288‑1 (MQ=255)
                                                                                     aTTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGt                                                                                                                                                                                              >  2:1304823/1‑289 (MQ=255)
                                                                                      ttCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGtt                                                                                                                                                                                             <  1:967750/289‑1 (MQ=255)
                                                                                      ttCAGTGCAGCGCTGTCCAGGTCCGCTTTACGCGCATTCCGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCAc                                                                                                                                                                                                                                                               <  2:1663084/223‑1 (MQ=255)
                                                                                       tCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTg                                                                                                                                                                                            <  1:739354/289‑1 (MQ=255)
                                                                                           tGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTc                                                                                                                                                                                                                 >  2:1578582/1‑264 (MQ=255)
                                                                                           tGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTc                                                                                                                                                                                                                 <  1:1578582/264‑1 (MQ=255)
                                                                                            gCAGCTCTTTCCAGTTCCGCTTTGCGCGCCTTCAGCGCCTGCGGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACt                                                                                                                                                                                        <  2:230743/288‑1 (MQ=255)
                                                                                            gCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACCCtttttctttttcctt                                                                                                                                                                                       <  1:859366/289‑15 (MQ=255)
                                                                                            cgaccgcTTTCCCGTTCCGCTTTAGGCGCATGCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGGTAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACtt                                                                                                                                                                                       <  2:448720/285‑1 (MQ=255)
                                                                                             ctccgcTTTCGAGTTCCGCTTTACGCGCATTCCGCGCCGGCTGAACGTGATCTTTCGCTTCGTTGATACCCGCACCGGCTGCCGACCGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTAGCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTa                                                                                                                                                                                      <  2:1031440/286‑1 (MQ=255)
                                                                                                cgcTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAg                                                                                                                                                                                                                                                     >  1:1663084/1‑223 (MQ=255)
                                                                                                cgcTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTCGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATCATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTCATGCAAGATGTCACATTGTTTTCCt                                                                                                                                                                                                                          >  2:1405449/1‑250 (MQ=255)
                                                                                                 gcTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTagag                                                                                                                                                                                   <  2:1987868/288‑1 (MQ=255)
                                                                                                 gcTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGc                                                                                                                                                                                  <  1:1005874/289‑1 (MQ=255)
                                                                                                     tCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTa                                                                                                                                                                               >  1:10727/1‑288 (MQ=255)
                                                                                                          ttCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTTTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCa                                                                                                                                                                          >  1:4004/1‑288 (MQ=255)
                                                                                                           tCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCAt                                                                                                                                                                         <  1:1950067/288‑1 (MQ=255)
                                                                                                              gCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAgg                                                                                                                                                                     <  1:322343/289‑1 (MQ=255)
                                                                                                               cTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCa                                                                                                                                                                                                                        <  1:1723836/237‑1 (MQ=255)
                                                                                                               cTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTc                                                                                                                                                                                                                 <  2:1605384/244‑1 (MQ=255)
                                                                                                               cTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAgtggt                                                                                                                                                                                                           <  1:1377433/250‑1 (MQ=255)
                                                                                                               cTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAg                                                                                                                                                                      >  1:1301472/1‑287 (MQ=255)
                                                                                                                 ttACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTa                                                                                                                                                                  <  2:458763/289‑1 (MQ=255)
                                                                                                                               cgcCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCt                                                                                                                                                                                                                          <  1:1506099/219‑1 (MQ=255)
                                                                                                                               cgcCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGt                                                                                                                                                                                              >  1:122786/1‑247 (MQ=255)
                                                                                                                                gcCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCAttt                                                                                                                                                   <  1:506656/289‑1 (MQ=255)
                                                                                                                                gcCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCAttt                                                                                                                                                   <  1:1203142/289‑1 (MQ=255)
                                                                                                                                gcCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCAttt                                                                                                                                                   <  2:607027/289‑1 (MQ=255)
                                                                                                                                     ctgAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACt                                                                                                                                                                                        >  2:2025273/1‑247 (MQ=255)
                                                                                                                                     ctgAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCTATCCGGCTATTTGCCTTGCCATTTTGGt                                                                                                                                               >  2:1677774/1‑288 (MQ=255)
                                                                                                                                         aCCTGCTCTTTCGCTTCGTTGATAGCCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTTTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGCTTATTTTACTTGCCATTTTGGTCCCgg                                                                                                                                          >  2:799459/1‑289 (MQ=255)
                                                                                                                                                   tCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTTCTTGCCATTTTGGTCCCGGGCTGTGCTCg                                                                                                                                <  1:1216700/289‑1 (MQ=255)
                                                                                                                                                           ttGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATtct                                                                                                                         >  1:1408780/1‑288 (MQ=255)
                                                                                                                                                           ttGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATtct                                                                                                                         >  2:1535378/1‑288 (MQ=255)
                                                                                                                                                             gATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCAc                                                                                                                      <  1:1304823/289‑1 (MQ=255)
                                                                                                                                                               tAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACg                                                                                                                     <  1:1598458/288‑1 (MQ=255)
                                                                                                                                                                   tgcgtgaGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCCCATTGTGTCAGTGTTGACACTGGTTCGTTGTACTTAGAGCCTATTCCATCAGGCTATTTTACTTGCCATTTTGGTCTCGGGATGTGCTCGAAATTCTCACTTaact                                                                                                                >  2:1609283/7‑286 (MQ=255)
                                                                                                                                                                     cACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACCCTGGTTCGTTGGACTTAGAGCCTATCCCATCAGCCTATTTTACTTGCCATTTTGGTCCCTGGCTGTGCTCGAAATTCCCCCGTACTTaa                                                                                                              >  2:390097/1‑289 (MQ=255)
                                                                                                                                                                     cACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTaa                                                                                                              >  2:640804/1‑289 (MQ=255)
                                                                                                                                                                        cAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAAt                                                                                                            >  2:777148/1‑288 (MQ=255)
                                                                                                                                                                                      tcttctGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTtctc                                                                                             <  1:57679/289‑1 (MQ=255)
                                                                                                                                                                                      tcttctGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTtctc                                                                                             <  2:1102401/289‑1 (MQ=255)
                                                                                                                                                                                        ttctGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTcc                                                                                            >  2:1909389/1‑288 (MQ=255)
                                                                                                                                                                                               ggcAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGc                                                                                    <  1:1535378/289‑1 (MQ=255)
                                                                                                                                                                                                gcAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGcc                                                                                   >  1:464908/1‑289 (MQ=255)
                                                                                                                                                                                                              gtcgtcATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCt                                                                        <  1:1031362/286‑1 (MQ=255)
                                                                                                                                                                                                                 gtgatctgactgtgtAAGTGCCCTTTTTCATCCAAATATTCGACGCGCACATTATCTAACGCGGAAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGc                                                                  <  2:847439/275‑1 (MQ=255)
                                                                                                                                                                                                                 gtcATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGc                                                                  <  1:454133/289‑1 (MQ=255)
                                                                                                                                                                                                                            ggTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTAGTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTaca                                                        <  2:739162/288‑1 (MQ=255)
                                                                                                                                                                                                                              ttAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACtt                                                                                                                                                                                       >  2:404558/1‑159 (MQ=255)
                                                                                                                                                                                                                                aaGTGCCCTCTTTTACCCACATATTCGCCGCGCACATACTCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTTTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCtga                                                   <  2:1412709/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAACTATTCGCCGCGCACATTATCTAACGCGGCAACATCTGCCGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGAc                                             <  2:150782/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTc                                                                                                      >  2:1487845/1‑232 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTc                                                                                                      <  1:1487845/232‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCgg                                                                                                   <  2:89031/235‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGAc                                             <  1:564965/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ccTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGAc                                             <  1:20693/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ttttttACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAg                                           >  1:675086/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cgcgCACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAAc                        >  1:1326035/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              cgcACATTATCTAACGCGGCAACAACTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGTGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGCCTGGCTGCGACAATTACACCTGATGAGCCAGGGTTTTAATTTTGCaaaatcc                      >  2:321976/1‑285 (MQ=255)
                                                                                                                                                                                                                                                               gcACATTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGt                                                                                                  <  2:138527/211‑1 (MQ=255)
                                                                                                                                                                                                                                                                  caTTATCTAACGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATa                 <  1:1607882/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          aaCGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACaaaaaaa         <  1:607449/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aCGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTGCTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTa                                                          <  1:1641102/239‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aCGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTGCTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTa                                                          >  2:1641102/1‑239 (MQ=255)
                                                                                                                                                                                                                                                                           aCGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGc                                                                  >  2:2220003/1‑231 (MQ=255)
                                                                                                                                                                                                                                                                           aCGCGGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACaaaaaaa         >  1:1262730/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             gcgGCAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGc       >  1:360416/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 cAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTcc   >  1:701112/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 cAACATCTGACGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGTGACATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTcc   >  1:250367/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGACGCGCATTCAGTGCAGCGCTTTCCAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGGACGCTCTTCTGGCGGCAGCTCACGCAGGGTCGTCATCTGAAGGGTTAAGTGCCCTTTTTTACCCAAATATTCGACGCGCACATTATCTAACGCGGCAACATCACTCGCCTGGCTAATGGCCGCCTTCGCACTGGCAACCAGTTCTGCGAGATGACTCATGGTTTTCCTCATTGTGTCAGTGGTGACACTGGTTCGTTGGACTTAGAGCCTATCCCATCAGGCTATTTTACTTGCCATTTTGGTCCCGGGCTGTGCTCGAAATTCTCACGTACTTAAATACGCTCCGGTTTCTCCGCGCTGGCCGTGTCCAGTCTGGCTGCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCA  >  CP042583/1480557‑1481118

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A