Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,490,290 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,490,2900AT100.0% 786.3 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (153/179);  total (153/179)
*CP0425831,490,2910GC99.1% 781.2 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (153/176);  minor base A (0/3);  total (153/179)
Fisher's exact test for biased strand distribution p-value = 2.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,490,2920TA99.1% 780.7 / NA 332intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (153/174);  minor base C (0/3);  total (153/179)
Fisher's exact test for biased strand distribution p-value = 2.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 332 total aligned reads displayed.

ATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGAGTACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCAGTCATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGAGTGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTATT  >  CP042583/1490014‑1490571
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                       
 tGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCa                                                                                                                                                                                                                                                                              <  2:268653/289‑1 (MQ=255)
    aTTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGc                                                                                                                                                                                                                                                                            <  1:182796/288‑1 (MQ=255)
             cACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGtt                                                                                                                                                                                                                                                                  >  1:62812/1‑289 (MQ=255)
                  cGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGTAGAAAAAGGGAGCGCTTTCGGCAATATCGACGCCACCGTCGAGCATATTCAGCAGCGTCTGGCGTCACATCAACCGCAGCCTTCGCTGTTCCACg                                                                                                                                                                                                                                                             >  2:1866571/1‑289 (MQ=255)
                  cGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACg                                                                                                                                                                                                                                                             >  1:570555/1‑289 (MQ=255)
                   gTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACg                                                                                                                                                                                                                                                             >  1:133903/1‑288 (MQ=255)
                     ccGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCg                                                                                                                                                                                                                                                          >  1:1153518/1‑289 (MQ=255)
                            aTGCGCATGACGCAGTAATTCTTGGGCCGCAAATTGCGCGTTTACATCCATGGAGCCACCAACCACAATTTGGCCTTGATGTCGATAACGCGCTCTCCACAACTCCACAGCCAAACACCTGGCAACGTCGCTGGTCAACGTTTTTGGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTAt                                                                                                                                                                                                                                                    <  2:1260280/288‑1 (MQ=255)
                             tGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATgg                                                                                                                                                                                                                                                  >  1:1053712/1‑289 (MQ=255)
                                  aTAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                                                                                                                                             <  1:839544/289‑1 (MQ=255)
                                  aTAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                                                                                                                                             <  2:1202550/289‑1 (MQ=255)
                                      cgcATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGCGCATATTCAGCAGCGTCTGGCCTCACAACAACCGCAGCCTTCTCTGTTGCCCGGCAATTTATGGTCCGGCAAc                                                                                                                                                                                                                                         >  2:1435171/1‑289 (MQ=255)
                                            tATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCa                                                                                                                                                                                                                                   <  1:506928/289‑1 (MQ=255)
                                            tATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCa                                                                                                                                                                                                                                   <  2:2231988/289‑1 (MQ=255)
                                            tATTCTTAGTCTGCAAATTGGCCGTTTACCTCAATGGATCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCa                                                                                                                                                                                                                                   <  2:812845/289‑1 (MQ=255)
                                             aTTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCAc                                                                                                                                                                                                                                  <  2:1515230/289‑1 (MQ=255)
                                              ttcttcGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAAGTTGTGCTTGATTTCGATAATGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGCACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACt                                                                                                                                                                                                                                 <  2:1559217/289‑1 (MQ=255)
                                              ttCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACt                                                                                                                                                                                                                                 <  1:1435171/289‑1 (MQ=255)
                                                cTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTgg                                                                                                                                                                                                                               >  1:1914592/1‑289 (MQ=255)
                                                   ggTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                                                                                                                                             <  1:460897/272‑1 (MQ=255)
                                                    gTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACCGTGCACTGGGTcc                                                                                                                                                                                                                           >  2:227374/1‑289 (MQ=255)
                                                                   gTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCa                                                                                                                                                                                                                                   >  1:1463336/1‑266 (MQ=255)
                                                                           cAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGAcc                                                                                                                                                                                                    <  2:564390/289‑1 (MQ=255)
                                                                           cAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGAcc                                                                                                                                                                                                    <  1:262986/289‑1 (MQ=255)
                                                                             acggAGCGACCAACCACAATATTGCCTTGATTTCGCTAACGCCCTCTCCACAACTCCACAGCCCAACCCCTGGCAACGTCGCTGGTAAACGTTTTTGGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCg                                                                                                                                                                                                  <  2:896002/287‑1 (MQ=255)
                                                                             aTGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCg                                                                                                                                                                                                  >  2:765136/1‑289 (MQ=255)
                                                                             aTGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCg                                                                                                                                                                                                  >  1:394186/1‑289 (MQ=255)
                                                                               ggAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCgg                                                                                                                                                                                                 >  2:683353/1‑288 (MQ=255)
                                                                               ggAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCgg                                                                                                                                                                                                 >  2:874508/1‑288 (MQ=255)
                                                                                 aGCGACCACCCACAGTTTGGCCTTGATTGCGATAACGCGCACTCCACAACTCCACAGCCCAACACCGGGCAACGGCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGTCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               <  1:1116053/288‑1 (MQ=255)
                                                                                 aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCgg                                                                                                                                                                                                 >  2:1634084/1‑286 (MQ=255)
                                                                                 aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCgg                                                                                                                                                                                                 >  2:796947/1‑286 (MQ=255)
                                                                                 aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               <  1:705744/288‑1 (MQ=255)
                                                                                 aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               <  1:765136/288‑1 (MQ=255)
                                                                                  gCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               >  2:1406610/1‑287 (MQ=255)
                                                                                  gCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               <  1:1406610/287‑1 (MQ=255)
                                                                                   cGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCt                                                                                                                                                                                              >  1:2044836/1‑287 (MQ=255)
                                                                                   cGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCt                                                                                                                                                                                              >  1:1957957/1‑287 (MQ=255)
                                                                                     accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCt                                                                                                                                                                                           >  1:171546/1‑288 (MQ=255)
                                                                                     accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCt                                                                                                                                                                                           >  1:935163/1‑288 (MQ=255)
                                                                                     accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCt                                                                                                                                                                                           >  1:128535/1‑288 (MQ=255)
                                                                                      ccaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTa                                                                                                                                                                                          >  2:948589/1‑288 (MQ=255)
                                                                                                tttGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGAc                                                                                                                                                                                >  2:1988353/1‑288 (MQ=255)
                                                                                                       ttGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTg                                                                                                                                                                        <  1:948589/289‑1 (MQ=255)
                                                                                                                 tAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGc                                                                                                                                                               <  1:1222604/288‑1 (MQ=255)
                                                                                                                    cgcgCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATg                                                                                                                                                           >  1:852984/1‑289 (MQ=255)
                                                                                                                       gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                                                                                                                                        <  2:1797730/289‑1 (MQ=255)
                                                                                                                       gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                                                                                                                                        <  1:1807848/289‑1 (MQ=255)
                                                                                                                        ctctCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTg                                                                                                                                                                                       >  1:590003/1‑257 (MQ=255)
                                                                                                                        ctctCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                                                                                                                                        >  1:1866258/1‑288 (MQ=255)
                                                                                                                         tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTAcc                                                                                                                                                      >  1:1531410/1‑289 (MQ=255)
                                                                                                                         tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTAc                                                                                                                                                       >  2:319205/1‑288 (MQ=255)
                                                                                                                           tcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                                                                                                                                               <  1:1662700/246‑1 (MQ=255)
                                                                                                                            cacctaccccccaGCCCCACACCGGCCAACGTCGGTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCt                                                                                                                                                   <  2:171546/278‑1 (MQ=255)
                                                                                                                             cacaACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGAc                                                                                                                                                                    >  2:696974/1‑271 (MQ=255)
                                                                                                                                  cTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATa                                                                                                                                              >  2:1063788/1‑288 (MQ=255)
                                                                                                                                     cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAc                                                                                                                                                                                         >  1:1625918/1‑242 (MQ=255)
                                                                                                                                     cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                                                                                                                                        >  2:1299565/1‑275 (MQ=255)
                                                                                                                                             aaCACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                                                                                                                                             <  1:416323/182‑1 (MQ=255)
                                                                                                                                               cacCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCg                                                                                                                                                                                                  >  1:974541/1‑223 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGCCCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa                                                                                                                            >  2:1038232/1‑288 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCg                                                                                                                                                     <  1:2065118/263‑1 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCg                                                                                                                                                     >  2:2065118/1‑263 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCa                                                                                                                                                >  2:194864/1‑268 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa                                                                                                                            >  1:2192693/1‑288 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa                                                                                                                            >  1:2114828/1‑288 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa                                                                                                                            >  1:794696/1‑288 (MQ=255)
                                                                                                                                                    ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa                                                                                                                            >  1:552320/1‑288 (MQ=255)
                                                                                                                                                                 gtcaaCGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTTCACTGGGTCCGGATGGCCCGTACCTTTTCGACCCGGCCTGCTACTGTGGTGACCGAGACTGCGCCCTGGCGCTGTTACGGCTCCATCCCGTACTGCGCCCACACATCTATGACGCCTa                                                                                                               >  2:436223/5‑288 (MQ=255)
                                                                                                                                                                                 gAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTggg                                                                                                                                                                                     >  1:659653/1‑202 (MQ=255)
                                                                                                                                                                                 gAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTggg                                                                                                                                                                                     <  2:659653/202‑1 (MQ=255)
                                                                                                                                                                                  aacaacGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCt                                                                                             >  2:1123127/1‑289 (MQ=255)
                                                                                                                                                                                        ggATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGc                                                                                       <  2:573808/289‑1 (MQ=255)
                                                                                                                                                                                         gATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCt                                                                                                                                                   <  2:1660515/228‑1 (MQ=255)
                                                                                                                                                                                                    aGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGa                                                                           >  2:627983/1‑289 (MQ=255)
                                                                                                                                                                                                           aCTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCa                                                                     <  1:683983/288‑1 (MQ=255)
                                                                                                                                                                                                               gCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCgg                                                                >  2:1331659/1‑289 (MQ=255)
                                                                                                                                                                                                                cTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCgg                                                                <  1:874508/288‑1 (MQ=255)
                                                                                                                                                                                                                  gCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGttt                                                             <  1:370816/289‑1 (MQ=255)
                                                                                                                                                                                                                    aGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCgg                                                                >  1:803149/1‑284 (MQ=255)
                                                                                                                                                                                                                    aGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTAc                                                           <  2:852984/289‑1 (MQ=255)
                                                                                                                                                                                                                     gAAAAAGGGCTGTCTTTCGGAAATATCGACGCCATCGTGGAGCATTTTCAGCAGCGTCTGGCCTCAAATAAACCGCAGCCTGCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTAc                                                           <  2:2044836/288‑1 (MQ=255)
                                                                                                                                                                                                                      aaaaaGGGATCGCTTTCGGACCTATCCACGCCATCGTCGAGCCTATTCAGCAGCGTCTGGCCTCACGTCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCa                                                         <  2:1839605/289‑1 (MQ=255)
                                                                                                                                                                                                                       aaaaGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTAc                                                           <  1:239127/286‑1 (MQ=255)
                                                                                                                                                                                                                              aTCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTac                                                  >  1:2156658/1‑288 (MQ=255)
                                                                                                                                                                                                                               tcgatgtcagaaaTATCGGCGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTaca                                                 <  1:1495850/277‑1 (MQ=255)
                                                                                                                                                                                                                               tCGCTTTAGGCAATATCGAGGCCAGGGTCGAGCGTAGTCAGCGGCGTCTGGCCTCCACTCAACCGCAGCTTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCAGTGGGTCCGGGTGGCCCGGACATGTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTaca                                                 <  2:1743387/288‑1 (MQ=255)
                                                                                                                                                                                                                                             atCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGt                                   >  1:1300101/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 aCGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCagtca                                                                                                        <  2:455320/215‑4 (MQ=255)
                                                                                                                                                                                                                                                     cATCGTCGAGCATATTCCGCCACGTCTGACCTACACGCAACCGCAGCGTTCGTGGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCGGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGtt                           <  2:540024/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tcgAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTgg                     >  2:1909030/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           cgATCATATTCAGCAGCG‑‑TGCCCTCACATCACCCGCATCCTTCTCTGTTGCACTGCTATTTATGGTCCGTCATCTGTGCACTGGGTCCGGATGGCCCGTACATTTTCTACCCGGCCTGCTACTGTGGTGACCGAGAGTGCGACCTGGCGATGTTACCTCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACTCTGTTAAATCGTGCAAGGTTATTTGGCgg                  <  1:1899705/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tatTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAAcc                                                                  <  2:837364/237‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cagcGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTgt       >  2:2136345/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        cagcGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTgg       >  1:1763725/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        cagcGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCACTTgg       >  2:138346/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            gtgtGGCCTCTCATCAACACGAGCCTTCTCTGTTGCACGTCGATTGATGGTACGGCAACTGTGGAGTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTa    <  2:519565/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGAGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTa    <  2:394186/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGc                                                                                                                                                               >  2:248418/1‑132 (MQ=255)
                                                                                                                                                                                                                                                                             tCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGTCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACTCTGTTAAATCGTGCAAGGTTATTTGGCGTTCAGCATTTGGTTAtt  >  2:1489038/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                       
ATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGAGTACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCAGTCATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAGAGTGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTTATTTGGCGGTCAGCATTTGGTTATT  >  CP042583/1490014‑1490571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A