Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,501,586 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,501,5860AT99.6% 640.4 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (140/126);  minor base G (0/1);  total (140/127)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,501,5870CG99.6% 632.2 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (139/127);  minor base T (1/0);  total (140/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,501,5880TA98.9% 633.2 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (140/124);  minor base C (0/3);  total (140/127)
Fisher's exact test for biased strand distribution p-value = 1.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 267 total aligned reads displayed.

TTATAGATAAACACATGGAAGTTTTTGCCATTAAACAACTGCTGTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGACTCTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCTCTTCTTTATCAATCGC  >  CP042583/1501307‑1501860
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                
ttATAGATAAACACATGGAAGTTTTTGCCATTAAACAACTGCTGTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATcc                                                                                                                                                                                                                                                                           >  1:1532811/1‑289 (MQ=255)
          acacATGGAAGTTTTTGCCATTAAACAACTGCTGTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCtt                                                                                                                                                                                                                                                                 >  1:1004208/1‑289 (MQ=255)
                        ttGCCATTAAACAACTGCTGTTCTCGTGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCaaaa                                                                                                                                                                                                                                                   <  2:1751205/289‑1 (MQ=255)
                            cATTAAACAACTGCTGTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGc                                                                                                                                                                                                                                               <  2:778183/289‑1 (MQ=255)
                                    tctttctgTTCTCAGGCCGTGGCATTGCAGGGCGCGTTATCTCCTGCGTGCGTCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATCCAGTAGTCAGTTACCGACCAAGCATGGACGTCACTAAATGATCCTGAGCGTGTACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTc                                                                                                                                                                                                                                       <  2:2078334/284‑1 (MQ=255)
                                         ctgTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCATGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCg                                                                                                                                                                                                                                      >  2:685783/1‑285 (MQ=255)
                                           gTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGtt                                                                                                                                                                                                                                >  1:1802477/1‑289 (MQ=255)
                                                      gTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCa                                                                                                                                                                                                                     >  1:1198334/1‑289 (MQ=255)
                                                        ggCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAGATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      <  2:277257/286‑1 (MQ=255)
                                                        ggCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      <  1:1769191/286‑1 (MQ=255)
                                                        ggCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      <  1:1867583/286‑1 (MQ=255)
                                                            aTTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGcc                                                                                                                                                                                                               <  1:2079435/289‑1 (MQ=255)
                                                                 cGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAg                                                                                                                                                                                                             >  1:342149/1‑286 (MQ=255)
                                                                     gcgTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTgcg                                                                                                                                                                                                       <  2:1532811/288‑1 (MQ=255)
                                                                              aCTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCg                                                                                                                                                                                             <  1:879368/289‑1 (MQ=255)
                                                                              aCTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCg                                                                                                                                                                                             <  2:1226338/289‑1 (MQ=255)
                                                                                  gCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCg                                                                                                                                                                                             >  2:722059/1‑285 (MQ=255)
                                                                                      catcatCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTtgat                                                                                                                                                                                     >  2:852482/1‑289 (MQ=255)
                                                                                            cGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCgg                                                                                                                                                                                            >  1:204141/1‑276 (MQ=255)
                                                                                            cGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCa                                                                                                                                                                                >  1:210321/1‑288 (MQ=255)
                                                                                            cGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCCCCTACCCCAGGCGTCGCGCTTGTCCCGAGTTgatgattcg                                                                                                                                                                               >  2:1211768/1‑286 (MQ=255)
                                                                                             gACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGc                                                                                                                                                                              <  2:1802477/289‑1 (MQ=255)
                                                                                                            cAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGcc                                                                                                                                                                                                                        >  1:763950/1‑232 (MQ=255)
                                                                                                            cAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      >  1:237640/1‑234 (MQ=255)
                                                                                                            cAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACg                                                                                                                                                                                                                 <  2:2201549/239‑1 (MQ=255)
                                                                                                            cAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGc                                                                                                                                                                                                                >  2:746777/1‑240 (MQ=255)
                                                                                                            cAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCActtct                                                                                                                                                               <  2:1004208/289‑1 (MQ=255)
                                                                                                             aGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      >  2:51306/1‑233 (MQ=255)
                                                                                                                  ttCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCCGTGCCGCATACTCCAGGCGGCTCGCTTGTCCGGAGTTGATGATCAGCCCCACTACCACTTCTTCCac                                                                                                                                                          >  2:1408990/1‑287 (MQ=255)
                                                                                                                    cATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGc                                                                                                                                                         >  1:1369765/1‑287 (MQ=255)
                                                                                                                      tGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTTGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCtt                                                                                                                                                     <  1:1742074/289‑1 (MQ=255)
                                                                                                                       gAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCTGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTc                                                                                                                                                    >  1:12212/1‑289 (MQ=255)
                                                                                                                       gAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTc                                                                                                                                                    >  2:1276842/1‑289 (MQ=255)
                                                                                                                         aGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGc                                                                                                                                                                                                                      >  1:2006477/1‑221 (MQ=255)
                                                                                                                         aGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCa                                                                                                                                                   >  1:309673/1‑288 (MQ=255)
                                                                                                                                     tCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGct                                                                                                                                      >  1:1923382/1‑288 (MQ=255)
                                                                                                                                      cAGTAATCAGTTCACGCGCCAGCATGGACTTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCAGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGt                                                                                                                                     <  2:2036808/289‑1 (MQ=255)
                                                                                                                                        gTAATCAGTTCACACGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTa                                                                                                                                    >  2:1824729/1‑288 (MQ=255)
                                                                                                                                         tAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATc                                                                                                                                  >  1:512978/1‑289 (MQ=255)
                                                                                                                                          aaTCACTTCACTCGTAAGCATGTGCGTCATTAAATCATCCAGAGCGTGGTCCAGCACCAGACTCTCTTCCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTTCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGTCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATc                                                                                                                                  <  2:1873471/288‑1 (MQ=255)
                                                                                                                                             cAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGCGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGa                                                                                                                              <  1:1093820/289‑1 (MQ=255)
                                                                                                                                                ttCACGCGCAAGCATGGACGTCCTTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCTGCCAAAACGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCCGCGAGCTTGTCCGGGGTTGTTGACTGGCCCCATCGCCACTTCTCCCATCCTCTCATCCTCCTTTTTCGTATCCGGaagg                                                                                                                           >  2:354225/1‑287 (MQ=255)
                                                                                                                                                ttCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATg                                                                                                                           >  1:655629/1‑289 (MQ=255)
                                                                                                                                                 tCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGt                                                                                                                          >  2:1048905/1‑289 (MQ=255)
                                                                                                                                                          aGCATGGTCGTCATTAAATGATCCTGAGCGTGGCCCAGCACCAGCCTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:116765/289‑1 (MQ=255)
                                                                                                                                                          aGCATGGACGTCATTAAATGATCCTGGGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  2:20450/289‑1 (MQ=255)
                                                                                                                                                          aGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCgaga                                                                                                                  >  1:736229/1‑288 (MQ=255)
                                                                                                                                                          aGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:840628/289‑1 (MQ=255)
                                                                                                                                                          aGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:128529/289‑1 (MQ=255)
                                                                                                                                                          aGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:2221187/289‑1 (MQ=255)
                                                                                                                                                             aTGGACGGCATTAAATGATCTGGAGCGTGTACCAGCAACAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCCTTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCca                                                                                                              <  2:2129195/289‑1 (MQ=255)
                                                                                                                                                                     cATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACa                                                                                                       >  1:1256715/1‑288 (MQ=255)
                                                                                                                                                                     cATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCACCTTCCGTTTGCTTATCGGGAATGTGTTCGGGTCTCATCATACa                                                                                                       >  2:1458645/1‑288 (MQ=255)
                                                                                                                                                                     cATTAAATGATCCTGAGCGTGGA‑CAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCa                                                                                                                                                           <  1:212559/235‑1 (MQ=255)
                                                                                                                                                                      aTTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTCTCGAGATCCATCCTAAATc                                                                                                     >  2:1150096/1‑289 (MQ=255)
                                                                                                                                                                      aTTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGATATCCATCCTaaca                                                                                                      >  2:1910738/1‑285 (MQ=255)
                                                                                                                                                                      aTTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACa                                                                                                       >  2:283420/1‑287 (MQ=255)
                                                                                                                                                                               tCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCTGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCACATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATCCATCGTTCctcct                                                                                            >  2:253067/1‑287 (MQ=255)
                                                                                                                                                                               tCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGttt                                                                                                                                                                                                                               <  1:437570/158‑1 (MQ=255)
                                                                                                                                                                               tCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGttt                                                                                                                                                                                                                               >  2:437570/1‑158 (MQ=255)
                                                                                                                                                                               tCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCctc                                                                                              >  2:2096952/1‑287 (MQ=255)
                                                                                                                                                                               tCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCctc                                                                                              >  1:419032/1‑287 (MQ=255)
                                                                                                                                                                                ccTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGtt                                                                                                  <  1:1445214/282‑1 (MQ=255)
                                                                                                                                                                                ccTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGtt                                                                                                  >  2:1445214/1‑282 (MQ=255)
                                                                                                                                                                                 cTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCtt                                                                                          >  2:462006/1‑289 (MQ=255)
                                                                                                                                                                                    aGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCgag                                                                                                                   >  1:1626720/1‑261 (MQ=255)
                                                                                                                                                                                          gACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTg                                                                                                                                                                                                         <  2:2014252/169‑1 (MQ=255)
                                                                                                                                                                                          gACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCg                                                                                 >  2:395666/1‑289 (MQ=255)
                                                                                                                                                                                            ccAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCgg                                                                                <  2:1300284/288‑1 (MQ=255)
                                                                                                                                                                                                     gACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCGATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGGTCCTCCCTTTTCTTACCGGCCCGACTAc                                                                       >  2:2154040/1‑288 (MQ=255)
                                                                                                                                                                                                     gACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTAc                                                                       >  2:964140/1‑288 (MQ=255)
                                                                                                                                                                                                     gACCCACTTTCATCTTCCCTTCGCCCGCATCGCCTTCAATCATTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTAcc                                                                      <  2:12212/289‑1 (MQ=255)
                                                                                                                                                                                                      ccccACTTTCATCTTACCTTCCCCCGCATCGCCTTCAATCAGGTTCGTCTGTACCAGATGCGCTTCATTCAATGCCGTCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTAcc                                                                      <  2:309673/285‑1 (MQ=255)
                                                                                                                                                                                                          aCTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCTTTTGCGTATCGGGAATg                                                                                                                           <  1:478340/231‑1 (MQ=255)
                                                                                                                                                                                                               cttcgtACCTTCCCCCGCATCGCCTTCAATCACTTTCGTCTGTACCAGATTCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCCCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCa                                                            <  1:2021711/284‑1 (MQ=255)
                                                                                                                                                                                                                aTCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCa                                                            >  2:158509/1‑288 (MQ=255)
                                                                                                                                                                                                                  cTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGACAAAGCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGTAATGTTATCGAGATCCATCATACTTCGTTCCTCTCTTTCCTTACCGGCTCGATTACCCTTACCGGCATCg                                                         >  1:1053417/1‑289 (MQ=255)
                                                                                                                                                                                                                      ccTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTtg                                                                                                                                                                                       <  1:1278921/159‑1 (MQ=255)
                                                                                                                                                                                                                              cGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCa                                             <  1:395666/289‑1 (MQ=255)
                                                                                                                                                                                                                              cGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCa                                             <  1:1160293/289‑1 (MQ=255)
                                                                                                                                                                                                                                cATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:1638266/219‑1 (MQ=255)
                                                                                                                                                                                                                                   cGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCATGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCg                                        <  1:685783/289‑1 (MQ=255)
                                                                                                                                                                                                                                       ttCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTa                                     >  1:587325/1‑288 (MQ=255)
                                                                                                                                                                                                                                         cactgcgtatCGTGTGTATCAGAGGCGGGTCCTTCAATGCCATCCGTGCGCGATCCCTCATGGCTTTTGCTGCGTCAAAATCGCTCTGCTGCTCCTCCTGCAGAGAAGCAAACTCCGGGCTGCTCGCTTGCCCGAAGTTGTTGATACGCCCCATCGCCACTTGTCCCAACTCTTCAGCTTCCGGTTGCGTATCGGGAATGTCTTCGAGATCCATCATACATCGTGCCTCTCTTTTCTTACCGACACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCg                                  <  2:572127/280‑1 (MQ=255)
                                                                                                                                                                                                                                           aTCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGat                                >  1:131817/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGatat                              <  1:253067/289‑1 (MQ=255)
                                                                                                                                                                                                                                                tttCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 >  1:965951/1‑203 (MQ=255)
                                                                                                                                                                                                                                                       tGTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGct                    <  1:283420/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       tGTACCAGATGCGCTTCATGCAATGCCATCCGTGCCTGAGCCATCATGGCTTTTGCTGCGGCAAAATGGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGct                    <  2:1109658/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTACCAGTTGCGCTTCATCCAATGCCATCCTTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGctc                   <  2:1180380/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTACCAGATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGctc                   <  1:2154040/289‑1 (MQ=255)
                                                                                                                                                                                                                                                              gATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATcacca                                                                                                                                                                    >  1:331447/1‑138 (MQ=255)
                                                                                                                                                                                                                                                              gATGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCtcttct             >  1:2188605/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               aTGCGCTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCACCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATAGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCTcttctt            >  1:1968745/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGGTCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCCGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGct                    >  1:1224162/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 <  1:2060323/184‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGAt                                                                                                                 >  2:2060323/1‑184 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCTTTAGCGATATCTTCTTCGCTCTCTTCTTTATc        >  2:623059/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCTCTTCTTTATc        >  2:164431/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   gcTTCATTCAATGCCATCCGTGACTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGAGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCATTTCTTACCGACACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCTCTTCTTTATc        >  2:1343373/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                
TTATAGATAAACACATGGAAGTTTTTGCCATTAAACAACTGCTGTTCTCGGGCAGTGGCAATTTCCGGCGCGTTAATCACTGGCTGCATCATCGACTCCTTATGCCTTCAGTTTTTCATGAAGCTCAATTAATTCAGTAATCAGTTCACGCGCAAGCATGGACGTCATTAAATGATCCTGAGCGTGGACCAGCACCAGACTCACTTTCATCTTACCTTCGCCCGCATCGCCTTCAATCAGTTTCGTCTGTACCAGATGCGCTTCATTCAATGCCATCCGACTCTGATCCATCATGGCTTTTGCTGCGGCAAAATCGCCCTGCTTCGCCTGTTTCAGTGCCGCATACGCCAGGCTGCGCGCTTGTCCGGAGTTGATGATCAGCCCCATCACCACTTCTTCCAGCTCTTCAGCTTCCGTTTGCGTATCGGGAATGTTATCGAGATCCATCATACATCGTTCCTCTCTTTTCTTACCGGCACGATTACCCGTACCGGCATCGATTAAAATTTCAGGGCGTTAGCGATATCTTCTTCGCTCTCTTCTTTATCAATCGC  >  CP042583/1501307‑1501860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A