Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,513,539 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,513,5390AT99.6% 645.3 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (162/107);  minor base G (1/0);  total (163/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,513,5400CG99.3% 639.4 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (161/107);  minor base T (2/0);  total (163/107)
Fisher's exact test for biased strand distribution p-value = 5.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,513,5410TA99.3% 642.2 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (161/107);  minor base C (2/0);  total (163/107)
Fisher's exact test for biased strand distribution p-value = 5.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 270 total aligned reads displayed.

ATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGACTATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCT  >  CP042583/1513266‑1513818
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                      
aTCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCACGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTCCACAATTCACGCAGACCTTGTAAAAACGCATTGCTGGGTGGCACCACACCGCCTTCCCCCTGGCGGGGTTCGACAATCACCCCCACGGGAGAGTCGTACATCAGCGCGCTGGCAGAGTTAATATCGTGCAAGGGAGCATGACGAATATCCGCCGGCAGTGGCGCAAGAACCTGTGAATAGgcttgc‑tg                                                                                                                                                                                                                                                                           >  2:951538/1‑288 (MQ=255)
  cAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGccc                                                                                                                                                                                                                                                                        >  1:547490/1‑289 (MQ=255)
  cAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGccc                                                                                                                                                                                                                                                                        >  1:3936/1‑289 (MQ=255)
  cAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGcc                                                                                                                                                                                                                                                                         >  1:1598815/1‑288 (MQ=255)
          aCGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                <  1:593987/289‑1 (MQ=255)
          aCGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGCACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                <  1:1945858/289‑1 (MQ=255)
            gCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTCCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAATCGCGTTGCTGGCTGGCACCACACCGCCTTCACCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGTCTGGC‑TGCCCACCCGCACTg                                                                                                                                                                                                                                                              <  1:951538/289‑1 (MQ=255)
              cGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGAc                                                                                                                                                                                                                                                            <  2:580121/289‑1 (MQ=255)
                        ataGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAACTCCTGTGAAGAAGCTGGC‑TGCCCACCCGCCCTGACAGTaaaacg                                                                                                                                                                                                                                                   >  2:985509/1‑285 (MQ=255)
                          aGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTg                                                                                                                                                                                                                                                              >  1:685923/1‑275 (MQ=255)
                          aGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTg                                                                                                                                                                                                                                                              <  2:685923/275‑1 (MQ=255)
                          aGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGt                                                                                                                                                                                                                                                >  2:86363/1‑289 (MQ=255)
                             cagagctttCCCCGGTGGGCCCGACGCCGGTATGTACTTCATAAAAAATCAACAGCGCATTGTGGCGGTAAAACAATTCACGCAGACCTGGTAAAAGCGCGGTGCTGGCTGGCACCACCGCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTGGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑CGCCCACCCGCACTGACAGTAAACAGCGTg                                                                                                                                                                                                                                               <  2:1763381/280‑1 (MQ=255)
                               tACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                >  2:372017/1‑268 (MQ=255)
                               tACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGa                                                                                                                                                                                                                                            >  1:77236/1‑288 (MQ=255)
                               tACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGa                                                                                                                                                                                                                                            >  1:1847646/1‑288 (MQ=255)
                               tACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACCCGTTGATGGGTGGCCCCACACCTCCTTCCCCCTGGGTGGGTTCGACAATCACCGCACAAGTAGAGTCGTCAATCAGCGCGCTGGCAGCGTTAATATCGTTATATGCAGCATGACGAATAACCGCCGGCAGTGGCGCAAAATACCGTTAAGAGGCTGGCGTACCCA‑CCGCACTGACAGTAAAcctgtcactta                                                                                                                                                                                                                                           >  2:1170012/1‑279 (MQ=255)
                                aCAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGAc                                                                                                                                                                                                                                           >  2:1596216/1‑288 (MQ=255)
                                  aGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCg                                                                                                                                                                                                                                             <  1:1250207/284‑1 (MQ=255)
                                    ttCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCATAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGgctggc‑tg                                                                                                                                                                                                                                                                           <  2:1236890/252‑1 (MQ=255)
                                      ccccGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                <  1:100551/261‑1 (MQ=255)
                                            tGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCCGCATGAAGAATATCCGCCGGCAGTGGCGCAAAATCCGTTGAATAGGCTGGC‑TGCCCACCCGCACTGCGAGTAAAACGAGTGAGACCATgctaagcgtt                                                                                                                                                                                                                              >  2:52389/1‑280 (MQ=255)
                                            tGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATAGCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCAtt                                                                                                                                                                                                                              >  1:1424234/1‑289 (MQ=255)
                                                cccGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCAAGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCCCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTg                                                                                                                                                                                                                          >  2:263039/1‑289 (MQ=255)
                                                 ccGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTg                                                                                                                                                                                                                          <  1:1414555/288‑1 (MQ=255)
                                                        cGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCAc                                                                                                                                                                                                                  >  1:790047/1‑289 (MQ=255)
                                                           tttGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTTGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGGGGCGCAAAATCCTGGGAATCGGCTGGC‑TGCCCACCAGCCCTGACAGTAAACAGCGTTCGACCATGAAACGCAGTTTTGAAACCCACGAt                                                                                                                                                                                                               >  2:556685/1‑289 (MQ=255)
                                                            ttGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATg                                                                                                                                                                                                              <  2:1028255/289‑1 (MQ=255)
                                                              gTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGcc                                                                                                                                                                                                            <  2:790047/289‑1 (MQ=255)
                                                              gTAATTCATCAAAAATAAACAGCGCATTGTGGCGGTTACCCAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGcc                                                                                                                                                                                                            <  2:1334569/289‑1 (MQ=255)
                                                                aCTTCATCAAAAATCAACATCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCg                                                                                                                                                                                                           <  1:1143289/288‑1 (MQ=255)
                                                                         aaaaTCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATgg                                                                                                                                                                                                  >  1:557834/1‑288 (MQ=255)
                                                                            aTCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGc                                                                                                                                                                                              <  2:403625/289‑1 (MQ=255)
                                                                              cAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                >  1:413560/1‑221 (MQ=255)
                                                                                    cgcATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCgg                                                                                                                                                                                      >  1:1009775/1‑289 (MQ=255)
                                                                                     gcATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCg                                                                                                                                                                                       <  1:1589841/287‑1 (MQ=255)
                                                                                                gTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGc                                                                                                                                                                                                             >  2:1007585/1‑254 (MQ=255)
                                                                                                     acaATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTAt                                                                                                                                                                                                    <  1:838909/258‑1 (MQ=255)
                                                                                                                 gACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTa                                                                                                                                                          >  2:1015215/1‑288 (MQ=255)
                                                                                                                             aCGGGTTGCTGACTGACACCACACCGCCTTTCCCATGAAAGGGTTCGACAATAACGGGTCAGGTAGAGTCGTCAAGCAGCGTGCTGGTGGGGTTAATATCGTTATATGCCGCATGAAGAATATCCGACGGCAGTGGCGCAAAGACTTGTGAAGAGGCTGGC‑TGCTCACCCGTACTGCCAGTAAGCAGCGTGCGACCATGATACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGGGCGAATTTACGCGCCAGTTTTAGCGACGCTTCGtt                                                                                                                                             <  2:747556/289‑1 (MQ=255)
                                                                                                                             aCGCGTGTCCGGCTGACACCACATCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTAAATCAGCGCGCTGGCAGAGGTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGtt                                                                                                                                             <  2:1375574/289‑1 (MQ=255)
                                                                                                                              ctcgTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCa                                                                                                                                                                                                                   <  2:1710471/216‑1 (MQ=255)
                                                                                                                              cgcgTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTAt                                                                                                                                                                                                    <  1:1915664/233‑1 (MQ=255)
                                                                                                                              cgcgTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTg                                                                                                                                            >  2:1425685/1‑289 (MQ=255)
                                                                                                                                cgTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTg                                                                                                                                                                                                                                               <  2:2115005/188‑1 (MQ=255)
                                                                                                                                cgTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTg                                                                                                                                                                                                                                               >  1:2115005/1‑188 (MQ=255)
                                                                                                                                                       ccTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAaaga                                                                                                                   >  1:1434026/1‑289 (MQ=255)
                                                                                                                                                       ccTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAaaga                                                                                                                   >  2:451524/1‑289 (MQ=255)
                                                                                                                                                               cTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGa                                                                                                           >  1:1990765/1‑289 (MQ=255)
                                                                                                                                                                    tGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGc                                                                                                      <  1:1099813/289‑1 (MQ=255)
                                                                                                                                                                      ggTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCaa                                                                                                    >  1:246245/1‑289 (MQ=255)
                                                                                                                                                                       gTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCaaa                                                                                                   >  2:1420068/1‑289 (MQ=255)
                                                                                                                                                                       gTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCCTCGTTGGCTTCCGCACCGGAGTTACACAAGAAGACGCGATCGCCaa                                                                                                    >  2:891295/1‑288 (MQ=255)
                                                                                                                                                                              aaTCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCg                                                                                            <  1:1200945/289‑1 (MQ=255)
                                                                                                                                                                                           gTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAAttttt                                                                               >  1:1483614/1‑289 (MQ=255)
                                                                                                                                                                                           gTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAACTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGGGGCGTCGATCAAttttt                                                                               >  1:1390038/1‑289 (MQ=255)
                                                                                                                                                                                                  cgtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGcc                                                                          <  1:1576365/287‑1 (MQ=255)
                                                                                                                                                                                                   gtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAg                                                                        >  2:1112241/1‑288 (MQ=255)
                                                                                                                                                                                                   gtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAg                                                                        >  1:179286/1‑288 (MQ=255)
                                                                                                                                                                                                   gtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAg                                                                        >  2:1674785/1‑288 (MQ=255)
                                                                                                                                                                                                   gtcAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAg                                                                        >  1:177117/1‑288 (MQ=255)
                                                                                                                                                                                                    tcAATGAGCGCGCTGGGAGATTTAATATAGTTATAAGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGt                                                                       <  2:1781700/288‑1 (MQ=255)
                                                                                                                                                                                                     cAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTc                                                                      >  1:979456/1‑288 (MQ=255)
                                                                                                                                                                                                           gcgcgcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCCTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTGCGCACCGGAGCTACAAAAGAAGACGCGATCGGCAAACGTGGCGCCGCTCAATTTTTTCGCCAGGCGCAGTa                                                                >  2:1260090/1‑288 (MQ=255)
                                                                                                                                                                                                              cgcTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCg                                                             >  1:1781700/1‑288 (MQ=255)
                                                                                                                                                                                                                   gCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTCTTAGCGCCGCTTCGTTGGCCTCCGCCCCGGAGTTACAAAACACGACGCGATCGGCAAACGTGGCCTCGTACAATTGTTTCGCCAGTCGCAGTACCGGCTCGt                                                       >  2:317299/1‑289 (MQ=255)
                                                                                                                                                                                                                             tatCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCg                                                                                                                                                                                                           >  1:206185/1‑131 (MQ=255)
                                                                                                                                                                                                                               tCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGt                                           <  1:486674/289‑1 (MQ=255)
                                                                                                                                                                                                                                cGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGtt                                          <  1:1727948/289‑1 (MQ=255)
                                                                                                                                                                                                                                 gTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCAc                                                                                                                                                                                                                                                                >  2:1867094/1‑74 (MQ=255)
                                                                                                                                                                                                                                 gTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGcc                                                                          >  1:673738/1‑256 (MQ=255)
                                                                                                                                                                                                                                 gTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCTGCTCGTTGGTGTAACCGtt                                          >  1:740287/1‑288 (MQ=255)
                                                                                                                                                                                                                                 gTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCACTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCCTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGCCCCGATCGGCAAACGTGGCGGCGATCAATTTTTTCGCCAGTCCCAGTAACGGCCCTTTGGGGGAACCGtt                                          >  2:781982/1‑288 (MQ=255)
                                                                                                                                                                                                                                  ttATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGtt                                          <  1:3064/287‑1 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTAcgcg                                                                                                                                                                   <  2:1940521/165‑1 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACaa                                                                                                                       >  2:1746121/1‑209 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACaa                                                                                                                       <  1:1746121/209‑1 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGcc                                                                          <  1:1506033/254‑1 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCg                                                                     >  2:2009861/1‑259 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCg                                                                     <  1:2009861/259‑1 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGcc                                       >  1:884435/1‑289 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGcc                                       >  1:1306386/1‑289 (MQ=255)
                                                                                                                                                                                                                                   tataTGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAAACGTTGcc                                       >  1:1635599/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tatGCAGCATGACGACTATCCGCCGGCAGTGGCGCAAAAGCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCgg                                     <  2:714993/289‑1 (MQ=255)
                                                                                                                                                                                                                                          agcaTGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTCCAAAAGAAGACGCGATCGGCAAACGTGGCGTCGCTCAATTTTTTCGCCAGTCACAGTACCGGCTCCTTGGTGTAACCGTTGCCTGTCTg                                 >  2:1533730/1‑288 (MQ=255)
                                                                                                                                                                                                                                            caTGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGt                                                       <  1:105554/264‑1 (MQ=255)
                                                                                                                                                                                                                                            caTGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGTGGTAACCGTTGCCTGTCTGCCa                              >  2:1880872/1‑289 (MQ=255)
                                                                                                                                                                                                                                            caTGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCa                              >  2:2252621/1‑289 (MQ=255)
                                                                                                                                                                                                                                            caTGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCa                              >  2:501766/1‑289 (MQ=255)
                                                                                                                                                                                                                                             aTGACGAATAGCCGCCGACACTGGCACAAAATCCTGTGAATAGGCTGGC‑TGCTCACCCGCACTGACAGTAAACATCGTACGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCACCGCTTCGTTGGCTGCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGc                                <  2:146911/286‑1 (MQ=255)
                                                                                                                                                                                                                                              tGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGa                            <  1:52389/289‑1 (MQ=255)
                                                                                                                                                                                                                                               gACGAATATCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGa                            >  1:1279387/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      atCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTTGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCg                                                                     <  1:278009/240‑1 (MQ=255)
                                                                                                                                                                                                                                                      atCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTTGTTGGCCTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCg                                                                     >  2:278009/1‑240 (MQ=255)
                                                                                                                                                                                                                                                      atCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGCCGCGATCGGCAAACGTGCCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACt                     >  1:2149929/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      atCCGCCGGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACt                     >  2:83925/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         cgccgGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCCGTACCGGCTCGTTGGGTTAACCGTTGCCGGTATGCCAGAACTTACTctc                  >  2:1000339/1‑286 (MQ=255)
                                                                                                                                                                                                                                                          gccgGCAGTGGCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACTCGcc                 >  2:1982547/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   ggCGCAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACTCGCCTgttcgtt         <  1:1000339/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gcgcAAAATCCTGTGAATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCa       >  2:1059319/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                      
ATCAGGCGTCACGCCGTAGTGCATATAGGCATACAGTTCCCCGGTGCGCCCGACGCCGGTTTGTACTTCATCAAAAATCAACAGCGCATTGTGGCGGTTACACAATTCACGCAGACCTTGTAAAAACGCGTTGCTGGCTGGCACCACACCGCCTTCCCCCTGGATGGGTTCGACAATCACCGCACAGGTAGAGTCGTCAATCAGCGCGCTGGCAGAGTTAATATCGTTATATGCAGCATGACGAATATCCGCCGGCAGTGGCGCAAAATCCTGACTATAGGCTGGC‑TGCCCACCCGCACTGACAGTAAACAGCGTGCGACCATGAAACGCATTTTTGAACGCCACGATGCCGCTCTTATGGCTGCCGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGTTGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCT  >  CP042583/1513266‑1513818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A