Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,522,819 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,522,8190GC99.2% 565.1 / ‑3.5 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (113/128);  minor base T (1/1);  total (115/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01
*CP0425831,522,8200CG98.3% 550.3 / ‑2.5 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  major base G (110/127);  minor base A (3/1);  total (115/130)
Fisher's exact test for biased strand distribution p-value = 3.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,522,8210TA98.8% 570.2 / NA 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (112/129);  minor base G (2/1);  total (115/130)
Fisher's exact test for biased strand distribution p-value = 6.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

AGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGGCTCTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAAGCTCTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGC  >  CP042583/1522540‑1523098
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
aGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAg                                                                                                                                                                                                                                                                                 <  1:710844/288‑1 (MQ=255)
   ttttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCTATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGt                                                                                                                                                                                                                                                                              <  1:1498691/288‑1 (MQ=255)
   ttttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTc                                                                                                                                                                                                                                                                             >  1:538258/1‑289 (MQ=255)
   ttttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAACGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACCAACGGTGGAGGGACTTCacggtc                                                                                                                                                                                                                                                                             >  2:1499317/1‑284 (MQ=255)
      tcgaagcccGGATGGCACAAGGAGCAGCGCCGATGATAGTACCGTTATGTGGAAAGGGGGGAATATCAAACCAGCGCAGCAATTTTCATTCGCCGGCGGCACCGGCTGGCGGGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAgt                                                                                                                                                                                                                                                                          <  2:1999578/283‑2 (MQ=255)
      tCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGa                                                                                                                                                                                                                                                                          >  1:400233/1‑289 (MQ=255)
       cATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCa                                                                                                                                                                                                                                                                            <  1:1078276/286‑1 (MQ=255)
          acaccGGAGGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:777313/286‑1 (MQ=255)
          aaCCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAGCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:243351/289‑1 (MQ=255)
          aaCCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGGGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  1:318866/289‑1 (MQ=255)
          aaCCCGGATGGCACCATGCGCAGAGACGATGATATTACCGATATGTGGAAAGCGTGGAATATCAAACCGGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:128547/289‑1 (MQ=255)
          aaCCCGGATGGAACCAGGGGCAGCGCCCATGATATTACCGCTATGTGGAAAGCGGGAAATAGAAAACCAGAGCAGCAAGTTTCAGTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:1179244/289‑1 (MQ=255)
                 aTGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTTCAATTACATACGCTGGAGCGACTTCCGCGTCAGATACCCACTcc                                                                                                                                                                                                                                                                >  2:1848137/1‑288 (MQ=255)
                 aTGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTcc                                                                                                                                                                                                                                                                >  1:204312/1‑288 (MQ=255)
                          tGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCCGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAAAAACATTGCAATTACTGACGCTGGAGCGCCTTCAGCGTCAGATACACACGCAACACCCGCGt                                                                                                                                                                                                                                                      >  2:1926660/1‑289 (MQ=255)
                               aGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAgg                                                                                                                                                                                                                                                 >  1:1391583/1‑289 (MQ=255)
                                  gcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                                                                                                                                                                                                              <  1:2229378/289‑1 (MQ=255)
                                  gcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                                                                                                                                                                                                              <  2:178288/289‑1 (MQ=255)
                                  gcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                                                                                                                                                                                                              <  2:538258/289‑1 (MQ=255)
                                      atgttATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGTACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGGCAGATACCCACCCCACACCCTCGTAAAggcgctca                                                                                                                                                                                                                                           >  2:1873295/1‑282 (MQ=255)
                                       tgatATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATc                                                                                                                                                                                                                                         <  1:935496/289‑1 (MQ=255)
                                           atTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTATCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCCGATACCCACTCCACACCCGCGTAAAGgtcgctatc                                                                                                                                                                                                                                         >  1:872069/1‑280 (MQ=255)
                                              aCCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCAACACCCGCGTAAAGGTCGTCATCCAGcaca                                                                                                                                                                                                                                  >  1:2109270/1‑289 (MQ=255)
                                                     tgtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGAt                                                                                                                                                                                                                                                                         >  1:1038667/1‑243 (MQ=255)
                                                     tgtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTaaa                                                                                                                                                                                                                                                   <  1:1941655/265‑1 (MQ=255)
                                                                tGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATccac                                                                                                                                                                                                                 >  2:281075/1‑288 (MQ=255)
                                                                 ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTCAAGGTCGTCATCCAGCACAACCCACCGACGATccacca                                                                                                                                                                                                               >  2:1272711/1‑287 (MQ=255)
                                                                 ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAACAACTCCCAACCCGCGTCACGGTCGTCATCCAGCACAACGCACCCaaacacaccc                                                                                                                                                                                                                >  2:2101353/1‑280 (MQ=255)
                                                                    atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATccacgcaa                                                                                                                                                                                                             <  1:48982/288‑1 (MQ=255)
                                                                          aaCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACCACGCACCTAAGATacacgcacaccacgc                                                                                                                                                                                                      >  2:1503343/1‑289 (MQ=255)
                                                                               gagCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:1470651/220‑1 (MQ=255)
                                                                                agcagcAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACg                                                                                                                                                                                                                               >  1:1260685/1‑258 (MQ=255)
                                                                                   cgccaggttcattCTACGGCGGGCCCGGCGGGCGGGCGTCCGAAACCGTTAGGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGc                                                                                                                                                                                             <  2:2183645/278‑1 (MQ=255)
                                                                                   agcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGc                                                                                                                                                                                             <  1:1136651/289‑1 (MQ=255)
                                                                                    gcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCa                                                                                                                                                                                            <  2:920454/289‑1 (MQ=255)
                                                                                     caagtttcattCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGCGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAAACACGCAAACCATGCAg                                                                                                                                                                                           >  1:336081/10‑289 (MQ=255)
                                                                                     caagtttcattCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAg                                                                                                                                                                                           >  1:631609/10‑289 (MQ=255)
                                                                                      aagtttcattcaccTGCGGCACCGGCTGGCGCGCGGCCGAAACCTTTAGGTACGCACGCGCAATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCAATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACACCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGc                                                                                                                                                                                             <  1:1976598/273‑1 (MQ=255)
                                                                                      aagtttcattCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGc                                                                                                                                                                                             <  1:1880676/278‑1 (MQ=255)
                                                                                      aaggttcatgcgaatGCGGCGCCGACTGGTGCGCGTCCGAGACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGc                                                                                                                                                                                             <  2:1844586/272‑1 (MQ=255)
                                                                                           tcattCTACTGGGTCGCCGGGTGGGGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATa                                                                                                                                                                                     <  2:586047/286‑1 (MQ=255)
                                                                                                cTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCCCACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATaaa                                                                                                                                                                                   <  2:748646/286‑1 (MQ=255)
                                                                                                 tACGGCGGCACCGGCTGGCGCGGTTCCGAAACCTTTATGGACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATc                                                                                                                                                                               <  2:1613382/289‑1 (MQ=255)
                                                                                                   cTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATccacgcaa                                                                                                                                                                                                             <  1:581722/257‑1 (MQ=255)
                                                                                                   cTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGACCCGAACATCCACGCAAACCACGCCAACCATGCACGGAATAAACCTccc                                                                                                                                                                             >  2:419616/1‑289 (MQ=255)
                                                                                                         cACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGcaca                                                                                                                                                                       <  2:1554785/289‑1 (MQ=255)
                                                                                                           ccGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGcaca                                                                                                                                                                                                                                  <  1:37957/228‑1 (MQ=255)
                                                                                                             acccatggcgcgTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCCCAACCCCCCGAAGATCCACGCAAACCACGCAAACCCTGCCGGGAACAAAACTCCCAGCACCAAc                                                                                                                                                                    >  2:71758/8‑288 (MQ=255)
                                                                                                              gCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAg                                                                                                                                                                  >  1:1450189/1‑289 (MQ=255)
                                                                                                              gCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAg                                                                                                                                                                  >  1:2124637/1‑289 (MQ=255)
                                                                                                                tGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGt                                                                                                                                                                 <  2:1450189/288‑1 (MQ=255)
                                                                                                                   cgcgcgTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGa                                                                                                                                                             >  1:463993/1‑289 (MQ=255)
                                                                                                                          ccGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTc                                                                                                                                                      <  1:1499433/289‑1 (MQ=255)
                                                                                                                                  tttATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCtt                                                                                                                                              <  2:1347174/289‑1 (MQ=255)
                                                                                                                                       gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGGCGTCATCCAGCACCACGCACCGAAGATCCACGCAAACCACGCAAACACTGCAGGGAATAAAAATCCCAGCACAAACAATCAGAAAGATTCTGTGCCTTCggct                                                                                                                                         >  2:1096949/1‑287 (MQ=255)
                                                                                                                                         acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       <  1:1560338/289‑1 (MQ=255)
                                                                                                                                         acgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       <  1:1923717/289‑1 (MQ=255)
                                                                                                                                          ctagcgcgGCATGGGTGGGACAAATGTTTCCTGGTAAGACGGAGGATGGTACGAATGAGGCAGCGATCCAAAAAATCCGGTAGCCACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTTGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       <  2:2142462/284‑1 (MQ=255)
                                                                                                                                          cgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       >  1:900347/1‑288 (MQ=255)
                                                                                                                                          cgcacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       >  1:231079/1‑288 (MQ=255)
                                                                                                                                                cgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACCCAAACCATCCAGGGAATAAACATCCCAGCACAAAAAGTAAAAGCGTTTCTCTGCCTTCGGTTAATccccac                                                                                                                                >  2:1230281/1‑287 (MQ=255)
                                                                                                                                                     tGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGt                                                                                                                                                                 <  1:1873233/251‑1 (MQ=255)
                                                                                                                                                     tGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATa                                                                                                                           >  1:1663310/1‑289 (MQ=255)
                                                                                                                                                          tGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTaa                                                                                                                       <  1:766661/288‑1 (MQ=255)
                                                                                                                                                           ggAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTTCCTTCGGTTAATCTCCCCAGAGAGTaaaa                                                                                                                     >  2:333991/1‑289 (MQ=255)
                                                                                                                                                            gaagaaTGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                                                                                                                                                                                                                      <  2:1077337/143‑1 (MQ=255)
                                                                                                                                                                 aTGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTaaaacgactt                                                                                                               <  1:2170746/289‑7 (MQ=255)
                                                                                                                                                                  tGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTaaaacgactta                                                                                                              >  1:1024783/1‑282 (MQ=255)
                                                                                                                                                                  tGTTTCCGTGTATGACGGCGGCTGGCACGAATGGAGCAGCGAGCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCCACTTCCGCGTCACATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACCACGCACCGACGCTCCTCGCAAACCACGCAAACCATGCAGGGAATAAACCTCCCAGCACACACAGTAAGACCGATTCTGTGCCTTCGGTTAATCTCCCCAGCTAGTaaacagacgta                                                                                                              >  2:1625980/1‑281 (MQ=255)
                                                                                                                                                                          tgtATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCAAAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGAACGTTTCTGCGCCTTCGGTTAATACCCCCAGATAACAAAACGACTTAtgtgaaac                                                                                                      >  2:475821/1‑285 (MQ=255)
                                                                                                                                                                               gACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCgg                                                                                                 <  1:696238/289‑1 (MQ=255)
                                                                                                                                                                                    cggcTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTCAAGGTCGTCATCCAGCACAACGCACCGAGGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACCAACAGTAAGACCCTTTCTGCGACCTCGGTTAATCCCCCCAGATAGTAAAACTCCTTACGTGCATAACCGGTGTTa                                                                                            >  2:1372851/1‑289 (MQ=255)
                                                                                                                                                                                      gcTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTAt                                                                                           <  2:204312/288‑1 (MQ=255)
                                                                                                                                                                                              gAAAGGGGCAGGGATCAAAAGACGCCGGTAACAACCTGTGCAAACGTCCCTGACAGTAACAAAGTACATTGGAGTTTCTGAGCCTGGAGCGACAACAACATCCGTTACCCACTCCACACCCGCGTAAAGATCGTCATCCAGCACAACACACCGAGGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGTTCGTTTCTGTGACTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGAGTTATCAATCTGAt                                                                                  <  2:111870/289‑1 (MQ=255)
                                                                                                                                                                                                aTGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGt                                                                                >  2:1127639/1‑289 (MQ=255)
                                                                                                                                                                                                 tGGCGCAGCGATCCAAAAAATCCGGTAGCGACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGtt                                                                               <  1:1347791/289‑1 (MQ=255)
                                                                                                                                                                                                    agcagcGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATaaa                                                                                                                                                                                   >  1:971588/1‑186 (MQ=255)
                                                                                                                                                                                                     gcagcGATCCAAAAAATCCTGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTaaaacgactt                                                                                                               <  1:1519914/253‑7 (MQ=255)
                                                                                                                                                                                                         cGATCCAAAAGAGCCGGTGGCAACCGTGGAGCACGGCCCGGGCAGTAGCAACTAGCATTGCAATTACTGACGCGGAAGCGACTGCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTtgctgc                                                                        <  2:646643/288‑1 (MQ=255)
                                                                                                                                                                                                         cGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCt                                                                                                                                                     >  2:121216/1‑211 (MQ=255)
                                                                                                                                                                                                         cGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCt                                                                                                                                                     <  1:121216/211‑1 (MQ=255)
                                                                                                                                                                                                          gATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTtgctgc                                                                        <  1:419616/287‑1 (MQ=255)
                                                                                                                                                                                                            tCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAg                                                                     <  1:289378/288‑1 (MQ=255)
                                                                                                                                                                                                              cAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCACTTACTGACGCTGGAGCGACCTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACCCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGACTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTCTCAATCTGATTTTTTGCTGCCAGttc                                                                  >  2:1730473/1‑287 (MQ=255)
                                                                                                                                                                                                              cAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTaa                                                                                                                                       <  1:1845425/220‑1 (MQ=255)
                                                                                                                                                                                                              cAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGtttt                                                                             >  2:934353/1‑278 (MQ=255)
                                                                                                                                                                                                              cAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTgc                                                                  >  2:394344/1‑289 (MQ=255)
                                                                                                                                                                                                                  aaaTCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTgcagca                                                              <  1:1757339/289‑1 (MQ=255)
                                                                                                                                                                                                                      ccGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAgg                                                          >  2:588699/1‑289 (MQ=255)
                                                                                                                                                                                                                      ccGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAg                                                           >  1:1951017/1‑288 (MQ=255)
                                                                                                                                                                                                                      ccGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCAACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAg                                                           >  1:1470685/1‑288 (MQ=255)
                                                                                                                                                                                                                                           ggCCCGGACAGTAGCAAATAACGCTGCAACTACTGACGCTGAAGTCGCTCCCGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAGACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGGTAATCCCCCCAGAGAGTAAAACGACTTATGTGCATacc                                                                                                    <  2:1019148/226‑3 (MQ=255)
                                                                                                                                                                                                                                            gCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCCCCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTgac                                    >  1:1836680/1‑287 (MQ=255)
                                                                                                                                                                                                                                                     gTAGCAAATAACATTGCAATTACTGACGCTGAAGTCGCTCCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGCGAGTAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATc                                                                                          >  1:1019148/1‑226 (MQ=255)
                                                                                                                                                                                                                                                      tAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCa                          >  1:821586/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      tAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACCCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCGTCGGTTAATCCCCCCAGATAGTAAAACGAATTATGTGCATAACCGGGGTTATAAACAGGATGTTTTGCTGCCAGTGCAGCAAAGGCAAGAGAACTGCAGCACGTGCCGCGAAACCCa                          >  2:850859/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       aGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAACCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCATTCCAGCAAAGGAGAGAAAACTGCTGCCCGTGCAGATAAACGCaa                         >  2:1390170/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                cATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGc                                                                                                         <  1:1364063/200‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCATCAAAGGCGAGAAAACTGCGGCCCGTTCCGATAAACCCAAAAAACAAcccg              >  2:1158937/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                               cGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAACGACTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAgc  >  2:359499/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
AGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGGCTCTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCCAGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCAGGGAATAAACATCCCAGCACAAACAGTAAGATCGTTTCTGTGCCTTCGGTTAATCCCCCCAGATAGTAAAAGCTCTTATGTGCATAACCGGGGTTATCAATCTGATGTTTTGCTGCCAGTGCAGCAAAGGCGAGAAAACTGCTGCCCGTGCCGATAAACGCAAACAACAACCAGCCGCCTGCCAGC  >  CP042583/1522540‑1523098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A