Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,550,167 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,550,1670AT99.4% 762.0 / NA 322intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (154/165);  minor base G (1/1);  total (155/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,550,1680GC99.7% 762.4 / ‑5.1 322intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (155/166);  minor base T (0/1);  total (155/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01
*CP0425831,550,1690CG99.7% 754.8 / NA 322intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (155/165);  total (155/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

Only 100 of 322 total aligned reads displayed.

GTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGAGTCGTTTTTCCATTCTTAGCCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATAGTAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGAGC‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑AGCACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCT  >  CP042583/1549888‑1550446
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
 tCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGa                                                                                                                                                                                                                                                                                >  2:1572343/1‑289 (MQ=255)
  cACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGa                                                                                                                                                                                                                                                                                <  1:1572343/288‑1 (MQ=255)
  cACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGa                                                                                                                                                                                                                                                                                <  1:1310307/288‑1 (MQ=255)
     tttCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAatat                                                                                                                                                                                                                                                                            >  2:767782/1‑289 (MQ=255)
            aataaCAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGAc                                                                                                                                                                                                                                                                      <  2:863383/288‑1 (MQ=255)
                 cAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATc                                                                                                                                                                                                                                                                           <  1:818834/278‑1 (MQ=255)
                 cAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATc                                                                                                                                                                                                                                                                           >  2:818834/1‑278 (MQ=255)
                   aaaaCAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCgg                                                                                                                                                                                                                                                              >  2:1790848/1‑289 (MQ=255)
                          cGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGAt                                                                                                                                                                                                                                                       >  2:1624967/1‑289 (MQ=255)
                                     tCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGaa                                                                                                                                                                                                                                            <  2:112047/289‑1 (MQ=255)
                                         tCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACgg                                                                                                                                                                                                                                         >  1:1351257/1‑288 (MQ=255)
                                            tgtTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAATTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACgg                                                                                                                                                                                                                                         >  1:1018918/1‑285 (MQ=255)
                                            tgtTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACgg                                                                                                                                                                                                                                         >  1:566972/1‑285 (MQ=255)
                                                      gTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGtt                                                                                                                                                                                                                          >  2:1856227/1‑289 (MQ=255)
                                                      gTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGtt                                                                                                                                                                                                                          >  1:1530680/1‑289 (MQ=255)
                                                       tGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGttt                                                                                                                                                                                                                         >  2:1546474/1‑289 (MQ=255)
                                                       tGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGttt                                                                                                                                                                                                                         >  1:2113039/1‑289 (MQ=255)
                                                          aGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTg                                                                                                                                                                                                                       <  1:1647663/288‑1 (MQ=255)
                                                             tGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGt                                                                                                                                                                                                                    <  2:488638/288‑1 (MQ=255)
                                                               ccgtagtcattgcGCCTTTCCGAAAAGATCAAAATCTACGACAAAGTGCTTAATCACAGTGAATTGACTCACTCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 <  2:1322782/280‑1 (MQ=255)
                                                               ccGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACGACGCCGGTGTCGATGAAGGGAAGAACGGTCGG‑TCGAAGCGTACTGCGTTTa                                                                                                                                                                                                                 >  2:170684/1‑289 (MQ=255)
                                                                cGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 <  1:301355/288‑1 (MQ=255)
                                                                                 tCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGGTTCGATGAAGGGCTGTAAGGGCTGTAGAACG‑GTTTTGTGTTTAAGAGCCCCCCCCGCgtgt                                                                                                                                                                                               >  2:1955368/1‑289 (MQ=255)
                                                                                        agaTCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGAc                                                                                                                                                                                                                                                                      >  1:912218/1‑212 (MQ=255)
                                                                                          aTCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCg                                                                                                                                                                                      >  1:1972490/1‑289 (MQ=255)
                                                                                          aTCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCg                                                                                                                                                                                      >  1:1242887/1‑289 (MQ=255)
                                                                                          aTCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCg                                                                                                                                                                                      >  1:21671/1‑289 (MQ=255)
                                                                                          aTCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCAGCGTGTTCAACTTCg                                                                                                                                                                                      >  2:365972/1‑289 (MQ=255)
                                                                                           tCAAAATCTCCGCGAAATTGCTTAATCACAGTGAATTGACTCCCGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGa                                                                                                                                                                                     <  2:634821/289‑1 (MQ=255)
                                                                                                    aCGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGAt                                                                                                                                                                                                             <  1:961553/256‑1 (MQ=255)
                                                                                                    aCGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGa                                                                                                                                                                            >  2:463570/1‑289 (MQ=255)
                                                                                                    aCGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATCAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGa                                                                                                                                                                            >  1:348082/1‑289 (MQ=255)
                                                                                                        gaAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGt                                                                                                                                                                         <  1:247541/288‑1 (MQ=255)
                                                                                                            ttGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGgcag                                                                                                                                                                    <  2:1018918/289‑1 (MQ=255)
                                                                                                                     cacaGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCgg                                                                                                                                                           <  1:1790848/289‑1 (MQ=255)
                                                                                                                     cacaGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCgg                                                                                                                                                           <  1:866049/289‑1 (MQ=255)
                                                                                                                         gTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCa                                                                                                                                                       >  1:937393/1‑289 (MQ=255)
                                                                                                                         gTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCa                                                                                                                                                       >  2:89447/1‑289 (MQ=255)
                                                                                                                           gaagtgacttcaggcccATGCGCCACCGGCACGATCGGAACCCGGTCACGTGTTTGCATTCTTTCGCGACTTGAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑GATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCAt                                                                                                                                                      <  2:2190342/274‑1 (MQ=255)
                                                                                                                           gAATTGACTCACGCCCCTTGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTcc                                                                                                                                                        <  2:1108220/286‑1 (MQ=255)
                                                                                                                           gAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATc                                                                                                                                                     <  2:958535/289‑1 (MQ=255)
                                                                                                                                  cTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTa                                                                                                                                              <  2:1768710/289‑1 (MQ=255)
                                                                                                                                  cTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTa                                                                                                                                              <  2:221625/289‑1 (MQ=255)
                                                                                                                                  cTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTa                                                                                                                                              <  1:807169/289‑1 (MQ=255)
                                                                                                                                      cGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGACGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCCCTCGCGCGTGTGCAACGTCGACCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCttctt                                                                                                                                           >  1:604724/1‑284 (MQ=255)
                                                                                                                                      cGCCCCATGCGCCCCTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCAt                                                                                                                                                      <  2:1327759/277‑1 (MQ=255)
                                                                                                                                      cGCCCCATGCGCCCCTGGCACGCCCGAAACACTGGCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCTAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGTCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGt                                                                                                                                           >  1:625085/1‑288 (MQ=255)
                                                                                                                                                 ccccTGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCTGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCCCCCGCGTGTTCAACTTCGATCATGTAGAACTGGCAACAAACCAGGTCCATTCGTTCCAGGGCCTGGaaacgga                                                                                                                               >  2:54417/1‑284 (MQ=255)
                                                                                                                                                    cTGGCACCGTGGAAACCCTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGAGGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGAt                                                                                                                            <  2:1224329/289‑1 (MQ=255)
                                                                                                                                                     tGGCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCAAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATACCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGCTTTGAGCTTAAGATACTCTCCCGCGTGTTCAACTTCGCGCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGATCTACGTCCTGTAAcagaag                                                                                                                              >  1:1762354/1‑286 (MQ=255)
                                                                                                                                                      ggCACGCTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTg                                                                                                                          <  2:739011/289‑1 (MQ=255)
                                                                                                                                                            cTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGTGATGAACGGTCTG‑TCGACGCGCTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGACGTGGCAGCAAACCCGGTCCACCTGTTCTACGTCCTTGAACAGCAGATTGAGcgcg                                                                                                                    >  1:1939524/1‑289 (MQ=255)
                                                                                                                                                            cTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGaa                                                                                                                                                                                                                                            >  1:110288/1‑170 (MQ=255)
                                                                                                                                                            cTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCcgc                                                                                                                                                                                                   >  2:1174077/1‑210 (MQ=255)
                                                                                                                                                            cTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGcgcg                                                                                                                    >  1:1224329/1‑289 (MQ=255)
                                                                                                                                                            cTCGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGcgcg                                                                                                                    >  1:2207497/1‑289 (MQ=255)
                                                                                                                                                              ggAAACACTGTACCGGTTTTCCATTATTTCGCGCCGTAAAGAGGCAGAGAACTCCAGGATTTATTCAAAGATGCTGGTTTATGATGGCGGAAGTGTGAAAGAGACCGACCCGAGGGCCAAGTCG‑TGTCAGGAATATCGTGGCTACGCCGGTGTCGTTGAAGGGATGAACGGACTG‑TCGACGGGTTTTGCGTTTAAGATGCTCTCCCGCGTGTTCATCTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAg                                                                                                                  <  2:1052486/288‑1 (MQ=255)
                                                                                                                                                              cGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAg                                                                                                                  <  1:486692/289‑1 (MQ=255)
                                                                                                                                                              cGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAg                                                                                                                  <  1:170684/289‑1 (MQ=255)
                                                                                                                                                              cGAAACACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTACAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAg                                                                                                                  <  1:1624967/289‑1 (MQ=255)
                                                                                                                                                                aaaCACTGTCACGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCa                                                                                                                <  2:97032/289‑1 (MQ=255)
                                                                                                                                                                     ctgtcacGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGt                                                                                                                                                                                                                    <  2:2089087/178‑1 (MQ=255)
                                                                                                                                                                       gtcacGTTTTTCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGTTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTccc                                                                                                          >  1:108407/5‑288 (MQ=255)
                                                                                                                                                                              ttttCCATTCTTTCGCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAgc                                                                                                  >  1:64853/1‑289 (MQ=255)
                                                                                                                                                                                      tctttcgcgccTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGa                                                                                           >  2:393495/8‑288 (MQ=255)
                                                                                                                                                                                        tttcgcgccTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 >  2:1371993/6‑168 (MQ=255)
                                                                                                                                                                                        tttcgcgccTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 <  1:1371993/163‑1 (MQ=255)
                                                                                                                                                                                        tttcgcgcaTGAAAGAGCCGGAAAACTCTTAGATTTGTGCAACAATGCGGGTTTATGATGGCAAACGGCGAAAGGACACGCATCCCTGAACC‑AGATCGTATCAGGCATATCGTGACTAGACCAGTATCGATGAAGGGATGACCGGTCTG‑TCTACGCGTTTTACGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAGGTGGCAGCAAACCCGGTCCATCTGTTCTACATCCTGGAACAGCTGATTGAGCGCGGGCAGTTCCCACAAGGACAGGCAGAACg                                                                                        <  2:574207/284‑1 (MQ=255)
                                                                                                                                                                                          tcgcgccTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAGAGACACCGGTCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCt                                                                                      <  2:125388/286‑1 (MQ=255)
                                                                                                                                                                                          tcgcgccTGAAAGAGCCAGAAAACTCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCca                                                                                                         >  2:934243/4‑270 (MQ=255)
                                                                                                                                                                                                  ggaaaagCCAGAAAACTCCAGCATTTTTTCAAGAATGCGGGTTTAGGATGGCGAAAGTCTGAAACACAACGTTCCCAAAGCCAAGTCT‑TATCAGGAATATCTTGACTACGCTGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAg                                                                              <  1:1323044/284‑1 (MQ=255)
                                                                                                                                                                                                                  tCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAAcag                                                                                                                                 <  1:2021955/222‑1 (MQ=255)
                                                                                                                                                                                                                  tCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGaa                                                                                          >  2:1504215/1‑261 (MQ=255)
                                                                                                                                                                                                                  tCCAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGaa                                                                                          <  1:1504215/261‑1 (MQ=255)
                                                                                                                                                                                                                   ccAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCGGGAGTTCCGTAAAGGTTa                                                                >  2:918875/1‑286 (MQ=255)
                                                                                                                                                                                                                   ccAGCATTTATTCAAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGGTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCt                                                             <  1:1431922/289‑1 (MQ=255)
                                                                                                                                                                                                                   ccAGCATTTATTCAAAGATGCGGGTGTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCt                                                             <  2:2113039/289‑1 (MQ=255)
                                                                                                                                                                                                                            attcaaaGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATGTCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTg                                                                        >  1:187091/6‑269 (MQ=255)
                                                                                                                                                                                                                            attcaaaGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGaa                                                    >  1:682716/6‑289 (MQ=255)
                                                                                                                                                                                                                            attcaaaGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGaa                                                    <  1:434981/284‑1 (MQ=255)
                                                                                                                                                                                                                                     tGCGGGTTTATGATGGGGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCg                                            <  2:2036573/288‑1 (MQ=255)
                                                                                                                                                                                                                                              atgatgGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 >  1:1458440/1‑114 (MQ=255)
                                                                                                                                                                                                                                              atgatgGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTa                                                                                                                                                                                                                 <  2:1458440/114‑1 (MQ=255)
                                                                                                                                                                                                                                              atgatgGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGa                                                                                                                                                                                     >  1:77836/1‑142 (MQ=255)
                                                                                                                                                                                                                                                 atgGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCa                                <  2:682716/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  tgGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCaaa                              <  1:2238016/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    gCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAaga                            >  1:2054389/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    gCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAaga                            >  1:756267/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    gCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAaga                            >  1:1284644/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑GCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCAACAAGAGCAGGCAGAACGCTATCAGGAGTTCCAGAAAGGTTCTCTGATCCCAAAATATGCCGGGCTTAGCGGGAAaggt                           >  2:307759/1‑287 (MQ=255)
                                                                                                                                                                                                                                                       aaaGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCCGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAg                                          >  2:1739241/1‑272 (MQ=255)
                                                                                                                                                                                                                                                       aaaGTCTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAg                                          <  1:1739241/272‑1 (MQ=255)
                                                                                                                                                                                                                                                            cTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAg                     <  1:392415/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            cTGAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAg                     <  1:978922/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              gAAAGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCaaa                              >  2:793982/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                aaGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGc                <  2:2249100/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aGACACCGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGcc               <  1:1171690/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGGCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGAGTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCtt         <  1:713822/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cGATCCCAAAGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCtt         <  1:105716/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aaGCCAAGTCG‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑TCGACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCa                                <  2:1301619/258‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
GTCACTTTCCGTAATAACAAAAACAACGAAGCCTTCCTCGATCGTGTTTACATCGTGAAGGTGCCGTATTGCTTGCGCATTTCCGAAGAGATCAAAATCTACGAGAAATTGCTTAATCACAGTGAATTGACTCACGCCCCATGCGCCCCTGGCACGCTCGAAACACTGAGTCGTTTTTCCATTCTTAGCCGCCTGAAAGAGCCAGAAAACTCCAGCATTTATAGTAAGATGCGGGTTTATGATGGCGAAAGTCTGAAAGACACCGATCCCAAAGCCAAGAGC‑TATCAGGAATATCGTGACTACGCCGGTGTCGATGAAGGGATGAACGGTCTG‑AGCACGCGTTTTGCGTTTAAGATCCTCTCCCGCGTGTTCAACTTCGATCATGTAGAAGTGGCAGCAAACCCGGTCCATCTGTTCTACGTCCTGGAACAGCAGATTGAGCGCGAGCAGTTCCCACAAGAGCAGGCAGAACGCTATCTGGAGTTCCTGAAAGGTTATCTGATCCCGAAATATGCCGAGTTTATCGGCAAAGAGATCCAGACGGCCTACCTTGAATCCT  >  CP042583/1549888‑1550446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A