Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,581,262 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,581,2620AT100.0% 594.3 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (137/112);  total (137/112)
*CP0425831,581,2630CG99.6% 582.9 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (137/111);  minor base A (0/1);  total (137/112)
Fisher's exact test for biased strand distribution p-value = 4.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,581,2640TA99.6% 589.2 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (136/111);  total (137/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 249 total aligned reads displayed.

GAATTCACCCGCAATGGCTTCCAGCACATCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCGCTAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGACTAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGGCTCGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGTGCTCTGGTGGCGAA  >  CP042583/1580983‑1581542
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
gAATTCACCCGCAATGGCTTCCAGCACATCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAagagag                                                                                                                                                                                                                                                                                  <  1:449517/288‑1 (MQ=255)
     cACCCGCAATGGCTTCCAGCACATCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTg                                                                                                                                                                                                                                                                            >  2:1460346/1‑289 (MQ=255)
      aCCCGCAATGGCTTCCAGCACATCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGtt                                                                                                                                                                                                                                                                             >  1:2163946/1‑287 (MQ=255)
                          caTCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGAcccc                                                                                                                                                                                                                                                       <  1:1190918/289‑1 (MQ=255)
                                 cgacgtaaacAGACCTCGCACCAACACACACTCGTTGTGAACGCTAACACACGCGCCGCGAGCACGACGAAGCCGACACAGCAGGTTGAGCGGATCGAGGGTTGCCGGCACGATAATCGCCGGAGACGGCGC‑AGCATGCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGAtt                                                                                                                                                                                                                                                 <  2:1671590/279‑1 (MQ=255)
                                          cAGACCTTGTACCACACCAAACCCGTTGGGCACGAGAACAAAGCGCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAAcc                                                                                                                                                                                                                                       <  2:1567591/289‑1 (MQ=255)
                                              ccTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCa                                                                                                                                                                                                                                     <  1:97159/287‑1 (MQ=255)
                                                 tGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTa                                                                                                                                                                                                                                <  1:79392/289‑1 (MQ=255)
                                                  gTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTAt                                                                                                                                                                                                                               >  1:1328258/1‑289 (MQ=255)
                                                   tACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTAtt                                                                                                                                                                                                                              >  2:1763007/1‑289 (MQ=255)
                                                        cacCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGGTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGAGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCGCGCGGATTGCATCGACCCCGAGACTGGAGTCGACCCAGCTTAGTTCAc                                                                                                                                                                                                                          >  2:1110795/1‑288 (MQ=255)
                                                         acCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCAcc                                                                                                                                                                                                                         >  2:1302995/1‑288 (MQ=255)
                                                         acCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCGCGCGGATTTCATCGACCCCGAGATTAGCTTCAACCCAGCTTATTTCAcc                                                                                                                                                                                                                         >  1:937351/1‑288 (MQ=255)
                                                             aaCTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACcgcgcg                                                                                                                                                                                                                    >  1:983778/1‑289 (MQ=255)
                                                                   ttGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGACACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCACGGCGTCa                                                                                                                                                                                                              >  1:1848400/1‑289 (MQ=255)
                                                                          cGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATcc                                                                                                                                                                                                        >  1:1608647/1‑288 (MQ=255)
                                                                               aCAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCa                                                                                                                                                                                                  <  1:1084197/289‑1 (MQ=255)
                                                                                     cTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCgcgg                                                                                                                                                                                                                   >  1:178519/1‑266 (MQ=255)
                                                                                     cTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCgcgg                                                                                                                                                                                                                   <  2:178519/266‑1 (MQ=255)
                                                                                     cTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGACACTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGAACCCGCCCAGAGaa                                                                                                                                                                                             >  1:118711/1‑288 (MQ=255)
                                                                                     cTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATCATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGACGAGAGCAGTTGCTCGCGGATTTCATCTACCCCGAGATTAGCGGCAACCCAGTTCATTTCCGCGCGCGGCGTCATGATCCCGGTCagagga                                                                                                                                                                                             >  2:2186017/1‑286 (MQ=255)
                                                                                      tCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACg                                                                                                                                                                                           <  2:963025/289‑1 (MQ=255)
                                                                                         cgcgAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACgcg                                                                                                                                                                                         >  2:1697897/1‑286 (MQ=255)
                                                                                                  gcggctgaacccccAACCGGTTGATCGGGTCGAGGGTTTCCGGGACGATAATCGCCGGAGCC‑GCCCAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACAGATGATTTCATCCAGTTCACCGCGACATGCCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGt                                                                                                                                                                               <  2:429335/278‑1 (MQ=255)
                                                                                                          aCGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTa                                                                                                                                                                          <  1:1013381/286‑1 (MQ=255)
                                                                                                            gCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCg                                                                                                                                                                     >  2:103172/1‑289 (MQ=255)
                                                                                                             cccAACAGGTTGATCGGATTGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCgcgg                                                                                                                                                                                                                   <  1:603616/242‑1 (MQ=255)
                                                                                                              ccAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTCGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACCCCggt                                                                                                                                                                   >  1:642441/1‑287 (MQ=255)
                                                                                                              ccAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGtt                                                                                                                                                                   >  1:193593/1‑289 (MQ=255)
                                                                                                              ccAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGt                                                                                                                                                                    <  1:1394511/288‑1 (MQ=255)
                                                                                                                caCAGGTTGATCGCATCGAGGGATCCCGATACGATACTCAGCGGCCAA‑GCCCAAGTAACCGCCGCCACATCTATTCCCTCGTACAAC‑CCACCCGCCAGTTATATCGCACGGTCAACACCGATGATTCCATCCAGCTCACCACGACATACCCGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGAGGATTTAATCGCCACCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTaa                                                                                                                                                                 <  2:376084/288‑1 (MQ=255)
                                                                                                                aaaaGGTTGTTCGGATGCAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTaa                                                                                                                                                                 <  2:1052954/286‑1 (MQ=255)
                                                                                                                 aCAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACACAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCACAGAACGCCACGCCAGCGTCAGTACGCCGTTaa                                                                                                                                                                 >  1:2039771/1‑288 (MQ=255)
                                                                                                                          tcggatcgAGGGTTTCCGGGACCATAACCGCCGAACAC‑CCCGACGCAATCGCCGCCTCGTCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACg                                                                                                                                                       <  2:937351/289‑1 (MQ=255)
                                                                                                                             gatcgAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGAATAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTCATCATGTAACGt                                                                                                                                                      >  1:359892/1‑287 (MQ=255)
                                                                                                                              atcgAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGAt                                                                                                                                                                                                                                                  >  2:631231/1‑194 (MQ=255)
                                                                                                                               tcgGGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGAt                                                                                                                                                                                                          <  2:533862/233‑1 (MQ=255)
                                                                                                                               tcgAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTa                                                                                                                                                                          <  2:804242/265‑1 (MQ=255)
                                                                                                                                   gggTTTCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGttcttcttc                                                                                                                                              >  1:481078/1‑289 (MQ=255)
                                                                                                                                        tCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACcgcg                                                                                                                                                                                                                      >  1:1032310/1‑212 (MQ=255)
                                                                                                                                        tCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATg                                                                                                                                                            >  2:338306/1‑270 (MQ=255)
                                                                                                                                        tCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATg                                                                                                                                                            <  1:338306/270‑1 (MQ=255)
                                                                                                                                        tCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCaa                                                                                                                                         >  2:1347217/1‑289 (MQ=255)
                                                                                                                                        tCCGGGACGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCCCCCGGCGTCATGATCCCGCGCAGAGAACGCCACGACAGCGGCCGTACCCCCGTAATCATGTAACGTTTCTCTTCCGCaa                                                                                                                                         >  2:1480134/1‑289 (MQ=255)
                                                                                                                                              acgcgaaTCGCCGGAGAC‑GCCGAAGCAACGGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACCATACCGTTGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCa                                                                                                                                    <  2:1617456/283‑1 (MQ=255)
                                                                                                                                              aCGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCa                                                                                                                                    <  1:79582/288‑1 (MQ=255)
                                                                                                                                               cGATAATCGCCGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCAc                                                                                                                                   <  1:1347217/288‑1 (MQ=255)
                                                                                                                                                         cGGAGAC‑GCCGAAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTGCTTCTTCGGCAAATGCACCTTCCGGGatc                                                                                                                        >  2:141383/1‑289 (MQ=255)
                                                                                                                                                                cgccgaaGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGatcggcat                                                                                                                   <  2:2035078/282‑1 (MQ=255)
                                                                                                                                                                      cgCAATCCCGGCCACATCAACGCCCCCTTCCGGCGCCACCAG‑CAGTTCTTTAGAAGGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCggcatcggcatc                                                                                                            <  2:2163946/288‑1 (MQ=255)
                                                                                                                                                                      aGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATcggcatcggcat                                                                                                             <  1:1478751/288‑1 (MQ=255)
                                                                                                                                                                             gccgccACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTAt                                                                                                     <  1:2186017/289‑1 (MQ=255)
                                                                                                                                                                                  cacaTCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCa                                                                                                <  1:1691707/289‑1 (MQ=255)
                                                                                                                                                                                  cacaTCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCa                                                                                                <  2:1127120/289‑1 (MQ=255)
                                                                                                                                                                                  aacctCAACACCCTCGTCCAGCGCCACCGT‑CAGTTCTTTAGCACGTACAATACCGATGGTGTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCa                                                                                                <  2:210644/285‑1 (MQ=255)
                                                                                                                                                                                         aCGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCt                                                                                         <  2:1328258/289‑1 (MQ=255)
                                                                                                                                                                                              ctctTCCAGCGCCACCAG‑CAGTTCTTTATCACGTACAATACCGATGATTTCATCCAGTGCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACa                                                                                    <  1:1222078/289‑1 (MQ=255)
                                                                                                                                                                                              ctctTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACa                                                                                    <  1:1072999/289‑1 (MQ=255)
                                                                                                                                                                                               tctTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACcgcgcg                                                                                                                                                                                                                    >  1:152707/1‑160 (MQ=255)
                                                                                                                                                                                                ctTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGCACGCTACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACAtt                                                                                  >  2:2061664/1‑289 (MQ=255)
                                                                                                                                                                                                         ccaccaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGGCGGTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGTCATCGGAAACGGGTTATCGGCAGTGTCGTGAAACTTGGCCTGCCg                                                                         >  2:1099730/1‑289 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTGACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTGCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCCTCGTGCTGAACATTGGCCTGACGtt                                                                       >  1:574457/1‑289 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCgcgg                                                                                                                                                                                                                   <  1:1921711/149‑1 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCgcgg                                                                                                                                                                                                                   >  2:1921711/1‑149 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGt                                                                                                                                                                    >  2:32591/1‑196 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGtt                                                                       >  1:2151487/1‑289 (MQ=255)
                                                                                                                                                                                                           accaG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATAGTGCTGAACATTGGCCTGACGtt                                                                       >  1:2030539/1‑289 (MQ=255)
                                                                                                                                                                                                              cg‑cagTTCTTTAGCACGTACAATACCGATGATTTCAGCCAGTTCCCCGCGACCTACCGGGAACAGACTGTGCGGTGAAGCGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTcc                                                                    <  1:1110795/288‑1 (MQ=255)
                                                                                                                                                                                                                    ttCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATg                                                                                                                                                            >  1:266840/1‑196 (MQ=255)
                                                                                                                                                                                                                    ttCTTTAGCACGTACAATACCGATAATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATg                                                                                                                                                            <  2:266840/196‑1 (MQ=255)
                                                                                                                                                                                                                     tCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGc                                                                 <  1:1302995/286‑1 (MQ=255)
                                                                                                                                                                                                                     tCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCa                                                              >  1:1721406/1‑289 (MQ=255)
                                                                                                                                                                                                                              cGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCAACGGCATAGGGTTATCGGCATCGTGCTGAAGCTTGGCCTGACGTTTCCCTCCCATCAAACGCa                                                     >  2:703716/1‑289 (MQ=255)
                                                                                                                                                                                                                              cGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACAGCGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCTCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCTCCGCAAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACTTTCCGGGATCGGGATCGCCATCGGGTTATCGTCATCGTGCGTAACATTGGCCGGACGTTTCCCGCCCATCCAACGCa                                                     >  2:1946306/1‑289 (MQ=255)
                                                                                                                                                                                                                                tACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGTACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGGATAGTGCTGTACATTGGCCTTGCGTTTCCCCCCCCTCCAACGCaa                                                    >  2:352413/1‑287 (MQ=255)
                                                                                                                                                                                                                                     tACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGatcggca                                                                                                                    >  1:322455/1‑219 (MQ=255)
                                                                                                                                                                                                                                      tcccatcattgcttCCAGTTCACCGCGCACTTCAGGTAACAGACGGTGCGGTGAAGATAGCGGTTGCTCTCGGATTTCACCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCa                                             <  2:642441/276‑1 (MQ=255)
                                                                                                                                                                                                                                        cGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATc                                           <  1:2012004/289‑1 (MQ=255)
                                                                                                                                                                                                                                         gatgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCg                                          >  1:1556387/1‑289 (MQ=255)
                                                                                                                                                                                                                                          atgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGCGAACGCGACGCCACCGTCAGTACGCCGGTAATCATGTAACGTTCGTCTTCGGCAAATTCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTCCTGACCATTGGCCTGCCGTCTCCCGCCCATCAAACGCAGGAGAGCATCgg                                         >  2:529272/1‑289 (MQ=255)
                                                                                                                                                                                                                                          atgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGatcggcat                                                                                                                   <  1:398303/215‑1 (MQ=255)
                                                                                                                                                                                                                                          atgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCGCGCCCATCAACCGCAGGATGGCATCgg                                         >  1:1125979/1‑289 (MQ=255)
                                                                                                                                                                                                                                          atgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCg                                          >  1:1664577/1‑288 (MQ=255)
                                                                                                                                                                                                                                          atgatTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGAATCGTGCTGAACATTGGCCTGACGTTGCCCGCCCATCAAACGCCGGATGGCAtgc                                          >  2:1973456/1‑286 (MQ=255)
                                                                                                                                                                                                                                             atTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAg                                      >  2:475484/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGt                                     >  1:994644/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ttCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGAGTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGt                                     >  1:866894/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        ttCACCGCGACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCCTCAAACGCAGGATGGCATCGACCGTACGCACtat                            >  2:2249874/1‑286 (MQ=255)
                                                                                                                                                                                                                                                             cgcgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCgg                      >  2:1086594/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cgcgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCg                       >  1:1454047/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             cgcgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATAGTGCTGAGCATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGACGGCAGCGGCAGGACGCGCTCGCAGcc                       >  2:213682/1‑287 (MQ=255)
                                                                                                                                                                                                                                                             cgcgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTCCCGGGCTCGCCATCGGCATCGGCTTCCCCGCATCGTGCTGAACCTTGGCCTGCCGTTTCCCGCCCATCCAACCCACGCTGGCACCGCCCACCCGCCCTCGCAGcc                       >  2:1523345/1‑287 (MQ=255)
                                                                                                                                                                                                                                                             cgcgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGGAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGTCCTGACGTTTCCCGCCCCTCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCgg                      >  2:1929987/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cgACATACCGGGAACAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCCCAGCGGCa                    >  1:1029648/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                gaagagccGGGAACCGACTGTGCGGTGATGAGAGCAGTGGCTCGTGGCTTCGATCGGCCCCGAGAGTAGAGTCAACCCAGCTTATTTCACCGCCAGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGAGTAAGTGCGCCGTTAATCATGTAACGTCCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCGGAACATTGGCCTGACGTTTCCAGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCa                    <  2:862647/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                  catacacgtaaCAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGCCACCGAGATTAGCGTCAACCCAGCTTATTGCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCAGCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAg                 <  2:1225644/280‑1 (MQ=255)
                                                                                                                                                                                                                                                                                aCTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGatcggcat                                                                                                                   >  1:679024/1‑177 (MQ=255)
                                                                                                                                                                                                                                                                                aCTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGTCGACTGGTGGCGa   >  1:1828379/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                aCTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCCCAGCGGCAAAGtcgcagggtggcga   >  2:788243/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                                 cTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCGACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATc                                                                                              >  1:380233/1‑197 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
GAATTCACCCGCAATGGCTTCCAGCACATCCAGCGGCGTGACCAGACCTTGTACCACACCAAACTCGTTGGTCACGATAACAAAGCTCCCGCGAGCACGACGCAGCACGCCCAACAGGTTGATCGGATCGAGGGTTTCCGGGACGATAATCGCCGGAGAC‑GCGCTAGCAATCGCCGCCACATCAACGCCCTCTTCCAGCGCCACCAG‑CAGTTCTTTAGCACGTACAATACCGATGATTTCATCCAGTTCACCGCGACATACCGGGAACAGACTGTGCGGACTAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGGCTCGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGTGCTCTGGTGGCGAA  >  CP042583/1580983‑1581542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A