Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,594,265 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,594,2650GC99.7% 667.1 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (146/142);  total (148/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,594,2660CG99.3% 682.4 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (147/141);  total (148/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,594,2670TA99.3% 682.0 / NA 290intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (146/142);  minor base C (2/0);  total (148/142)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 290 total aligned reads displayed.

CCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAAACTACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCACTAGCGCTAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGGCTTACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACGCTCATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAGACGAACTTTACTGCC  >  CP042583/1593986‑1594546
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
 cATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCt                                                                                                                                                                                                                                                                                  <  1:1388423/288‑1 (MQ=255)
  aTTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTc                                                                                                                                                                                                                                                                                <  1:524271/289‑1 (MQ=255)
    tCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAg                                                                                                                                                                                                                                                                              >  1:126052/1‑289 (MQ=255)
            tAACATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAAACTTGCCGTTGTTATCCCGGACCTGAACAATGGGACCCGCAGGAATAACCCGAACGGAGGGCGCTACGGCTGCAGCTAACGc                                                                                                                                                                                                                                                                       >  2:461548/1‑288 (MQ=255)
             aaCATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGA‑TTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGccc                                                                                                                                                                                                                                                                     >  2:1249514/1‑288 (MQ=255)
             aaCACCTAATCGGAATTACGGTTCAATGAACGGTATTGCGGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGccc                                                                                                                                                                                                                                                                     <  2:984982/289‑1 (MQ=255)
              aCATCTGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGcccc                                                                                                                                                                                                                                                                    <  1:1774281/289‑1 (MQ=255)
              aCATCTGATCGTAAATACGGTTCAATGAACGGTAGTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGcccc                                                                                                                                                                                                                                                                    <  1:504485/289‑1 (MQ=255)
                   tggtCGTAAATACGGTTCAATGAACGGGATTGCTGAACGGTGCCTTTACCAAACGTCGGTTAACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTGCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               <  2:681788/286‑1 (MQ=255)
                   tGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               <  1:463774/289‑1 (MQ=255)
                   tGATCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               <  1:343082/289‑1 (MQ=255)
                     aTCGTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGTCCCGAAGGAATAAACAGACCGGGGAGCGAGACGGCGTCATGTAACACCCCACCgac                                                                                                                                                                                                                                                              >  2:379110/1‑286 (MQ=255)
                        gTAAATACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAACCGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAGGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTg                                                                                                                                                                                                                                                          <  2:269032/289‑1 (MQ=255)
                           aaTACGGTTCAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCCGTTAACGCCCCCCCGCCATTGcc                                                                                                                                                                                                                                                        >  2:522500/1‑287 (MQ=255)
                             tACGGTTAAATGAACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCTCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACg                                                                                                                                                                                                                                                     <  1:1691682/289‑1 (MQ=255)
                                 gttcaatgaaCGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAAAAGACCGGAGAGGGCTACGGCTTCATGTAACGCCCCACCGCCATTGCTACGCaag                                                                                                                                                                                                                                                 >  2:1674655/10‑287 (MQ=255)
                                  ttcaatgaaCGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               >  1:727943/9‑274 (MQ=255)
                                  ttcaatgaaCGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCCTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTTTCTCTGACCCGAACAATGGCACCCGCAGGAATCAACAGACAGGACAGACAAACCGATTCAGTTACGTGCCCACCGCCATTGCTACgaggg                                                                                                                                                                                                                                                 >  2:27794/9‑284 (MQ=255)
                                          aCGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGatgatg                                                                                                                                                                                                                                        <  1:1949285/289‑1 (MQ=255)
                                            ggTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGAc                                                                                                                                                                                                                                      >  1:808051/1‑289 (MQ=255)
                                            ggTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGAc                                                                                                                                                                                                                                      >  1:993077/1‑289 (MQ=255)
                                               aTTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACgc                                                                                                                                                                                                                                    <  2:1217879/288‑1 (MQ=255)
                                                        cGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACAt                                                                                                                                                                                                                           >  1:170723/1‑288 (MQ=255)
                                                        cGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTCCTACGCAGGTCGATGATGACGCTGCTGTCAt                                                                                                                                                                                                                           >  1:1559224/1‑288 (MQ=255)
                                                          gTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACAt                                                                                                                                                                                                                           >  1:1014228/1‑286 (MQ=255)
                                                           tGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGAtgatga                                                                                                                                                                                                                                       >  1:1448839/1‑273 (MQ=255)
                                                                ttACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAAAAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTAAGCAGGTCGATGATGACGCTGCTGACAGTCCGtttt                                                                                                                                                                                                                   >  1:2023988/1‑288 (MQ=255)
                                                                             gTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAg                                                                                                                                                                                                     >  1:703526/1‑289 (MQ=255)
                                                                                cACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAACGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTg                                                                                                                                                                                                  <  1:981072/289‑1 (MQ=255)
                                                                                cACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTg                                                                                                                                                                                                  <  2:653792/289‑1 (MQ=255)
                                                                                            gcgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATc                                                                                                                                                                                      >  2:1100514/1‑289 (MQ=255)
                                                                                            gcgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATGGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATc                                                                                                                                                                                      >  1:2237233/1‑289 (MQ=255)
                                                                                             cgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTg                                                                                                                                                                                                  <  1:1468413/276‑1 (MQ=255)
                                                                                             cgcACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCg                                                                                                                                                                                     >  1:1598580/1‑289 (MQ=255)
                                                                                                 cGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTCCGCAGGTCGATGATGACGCTGCTGACATTCTGt                                                                                                                                                                                                                      >  1:1214977/1‑252 (MQ=255)
                                                                                                  gACCGTAATCCTGCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGt                                                                                                                                                                                <  1:638456/289‑1 (MQ=255)
                                                                                                    ccataacacTGCATAGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCACCACCACCAGCGGGCCTTTATAGAAAACCTGTCAGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGAACGGAGAGCGATACGGCTTCAGCTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCa                                                                                                                                                                              <  2:1602844/281‑1 (MQ=255)
                                                                                                     catAATCCTGCATTGCCGCGGCAAAGATTTCCGGAGCCGAAGCACTGAAGCGGTCAACCAGCACCAACCGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCaa                                                                                                                                                                             <  2:175914/287‑1 (MQ=255)
                                                                                                       tAATCCTGCATTTCCGCGGCAAAGATTTATGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTCTCTTCACGAACCTTGCAGTTGTTATCGCGGAACTGAAAAATGGGAACCGCAGGAATCACCAGACCGGAGAGCGATACGGCTTCAGTTAACGCCACACAGCCATTGCTACGCAGGCCGATGATGACGCTGCTGCCATTCTGTTCTTTCAGATTTTGGCGTTGCCATTTGACATAGTCGGTCaaa                                                                                                                                                                            >  2:1872676/1‑288 (MQ=255)
                                                                                                              gCATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATa                                                                                                                                                                    >  1:574077/1‑289 (MQ=255)
                                                                                                               cATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAg                                                                                                                                                                   >  2:637767/1‑289 (MQ=255)
                                                                                                               cATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAg                                                                                                                                                                   >  1:189719/1‑289 (MQ=255)
                                                                                                               cATTGCCGCGGCAAAGATTTCTGAAGCCGAAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAg                                                                                                                                                                   >  2:587803/1‑289 (MQ=255)
                                                                                                                      gcgGCAAAGATTGCTGAAGCCGAAGCACGGAAGCCGTGAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTGAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCGCATAGAAGCCCg                                                                                                                                                            <  2:104126/289‑1 (MQ=255)
                                                                                                                                        gccgaaGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               >  1:1536097/6‑172 (MQ=255)
                                                                                                                                          cgaatcACGGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGAc                                                                                                                                         <  1:279306/283‑1 (MQ=255)
                                                                                                                                            aaGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               >  1:803538/2‑168 (MQ=255)
                                                                                                                                             aGCCCTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAACGCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACttt                                                                                                                                      <  1:304818/288‑1 (MQ=255)
                                                                                                                                                   gAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCttt                                                                                                                                >  2:1334364/1‑288 (MQ=255)
                                                                                                                                                        ggTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGa                                                                                                                           <  2:2156449/288‑1 (MQ=255)
                                                                                                                                                         gTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACg                                                                                                                         >  2:958201/1‑289 (MQ=255)
                                                                                                                                                           cAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACgg                                                                                                                        <  2:1367487/288‑1 (MQ=255)
                                                                                                                                                                  caccacCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCAc                                                                                                                 >  1:616121/1‑288 (MQ=255)
                                                                                                                                                                   accaccAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCAcc                                                                                                                <  1:587803/288‑2 (MQ=255)
                                                                                                                                                                       ccaGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTGTACCGACGGTCttacccgacat                                                                                                           >  2:113178/1‑280 (MQ=255)
                                                                                                                                                                        caGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTCACGCCCCACCGCCATTTCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAATTTCTGCAGTTGCACGTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGCCTTTCTCTTTACCGACGGTCTTCAccgacatt                                                                                                          >  2:863207/1‑282 (MQ=255)
                                                                                                                                                                         aGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCAccgacattt                                                                                                         >  1:1672753/1‑281 (MQ=255)
                                                                                                                                                                           cGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTa                                                                                                       >  2:201997/1‑289 (MQ=255)
                                                                                                                                                                               ccTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGc                                                                                                                                                               >  1:217885/1‑229 (MQ=255)
                                                                                                                                                                                        aaaaCCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACgctgct                                                                                                                                                                                                                                >  1:447696/1‑155 (MQ=255)
                                                                                                                                                                                          aaCCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGTACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGc                                                                                                                                                                                                                                                               >  1:2223431/1‑122 (MQ=255)
                                                                                                                                                                                                tCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCAcc                                                                                                                >  1:844371/1‑258 (MQ=255)
                                                                                                                                                                                                tCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCAcc                                                                                                                <  2:844371/259‑2 (MQ=255)
                                                                                                                                                                                                  cGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAAt                                                                                <  1:955160/289‑1 (MQ=255)
                                                                                                                                                                                                    tCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATAc                                                                              >  2:2100552/1‑289 (MQ=255)
                                                                                                                                                                                                        ttacgcattCTTCCCGACCCTTGCCCTTATTAACGCGGACCTGAACAAAGGGACCAGCAGGAATAACCAGACCGGAGAGCGATAAGGTTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGtt                                                                           <  2:2191187/280‑1 (MQ=255)
                                                                                                                                                                                                              tATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGAc                                                                                                                                                                                         <  2:418878/172‑1 (MQ=255)
                                                                                                                                                                                                               aTCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCa                                                                                                                                                                              >  2:710298/1‑182 (MQ=255)
                                                                                                                                                                                                               aTCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTc                                                                   >  1:309779/1‑289 (MQ=255)
                                                                                                                                                                                                               aTCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTc                                                                   <  1:2100552/289‑1 (MQ=255)
                                                                                                                                                                                                                 cTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCaa                                                                 <  1:1334364/289‑1 (MQ=255)
                                                                                                                                                                                                                 cTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCaa                                                                 <  2:1393585/289‑1 (MQ=255)
                                                                                                                                                                                                                  ttCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGTTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCaa                                                                 >  2:1511414/1‑288 (MQ=255)
                                                                                                                                                                                                                   tCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACg                                                               <  1:1100514/289‑1 (MQ=255)
                                                                                                                                                                                                                      cggacctgtccGTTGGTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            <  2:574077/280‑1 (MQ=255)
                                                                                                                                                                                                                      cGAACCTTTCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            <  1:113178/289‑1 (MQ=255)
                                                                                                                                                                                                                      cGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            <  1:1235737/289‑1 (MQ=255)
                                                                                                                                                                                                                      cGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            <  1:1639930/289‑1 (MQ=255)
                                                                                                                                                                                                                      cGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            <  2:1460128/289‑1 (MQ=255)
                                                                                                                                                                                                                           cTTGCAGTTGTTATCGAGGACCTGCACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTa                                                       <  2:1556688/289‑1 (MQ=255)
                                                                                                                                                                                                                            ttGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCAcc                                                                                                                                                                                                                                                                 >  2:27953/1‑86 (MQ=255)
                                                                                                                                                                                                                            ttGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGGTTTCCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGAAATTTTAACCGCGCGGTCTTCGATACGACTACGTTCACGGGACAACGTTACAGTAc                                                      >  2:1944173/1‑289 (MQ=255)
                                                                                                                                                                                                                                   tgttATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACgggaaat                                               <  2:8040/289‑5 (MQ=255)
                                                                                                                                                                                                                                                   aaCAATGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACcagcc                               >  1:1883569/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        tGGGACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTg                                              >  1:1875151/1‑269 (MQ=255)
                                                                                                                                                                                                                                                          ggACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACcgcgcg                                                                                               >  1:386056/1‑218 (MQ=255)
                                                                                                                                                                                                                                                          ggACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTaaaa                        >  2:2229454/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          ggACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTaaaa                        >  1:270965/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          ggACCCGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGCCAACGTGACAGTACGGGTCTTGGTCCCTTTACACGCAGGGaaaa                        >  2:1895710/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cccGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTa                                                            >  2:1709492/1‑250 (MQ=255)
                                                                                                                                                                                                                                                              ccGCAGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTc                    <  1:2087577/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  agaaaTAACCAGACCGACGAGCCATACGGCTTCACTTAACGCCCACCCGCAATTGCTACGGAGGACGATGATGACGCTGATGCCCTTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAATCCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGACACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAg                 <  2:740959/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACg                                                                                                                                              >  1:1355404/1‑163 (MQ=255)
                                                                                                                                                                                                                                                                  aGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAg                 >  2:188031/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  aGGAATAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAGa                >  2:1640954/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      aTAAACAGACCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGCCCTTTTAACCGCCCCGTCCTCGAGCCCAATACGTTCCCGGGTCAACCTTACAGTCCGGGTCTCGGTTCCTTTACCATCAGGTAAAATTTCCATAcca             >  2:2072735/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                              aCCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTAc                                                           >  2:2045840/1‑234 (MQ=255)
                                                                                                                                                                                                                                                                              aCCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTAc                                                           <  1:2045840/234‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAGACg              <  2:775167/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCCGGAGAGCGATACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACCGACATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAGACg              >  1:775167/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
CCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAAACTACGGTATTGCTGAACGGTGCCTTTACCAAACGTCGGTTCACCCACAACCAGCGCACGACCGTAATCCTGCATTGCCGCGGCAAAGATTTCACTAGCGCTAGCACTGAAGCGGTCAACCAGCACCACCAGCGGGCCTTTATAGAAAACCTGTCCGTCGGTATCGCTATCTTCACGAACCTTGCCGTTGTTATCGCGGACCTGAACAATGGGACCCGCAGGAATAAACAGACCGGAGAGGCTTACGGCTTCAGTTAACGCCCCACCGCCATTGCTACGCAGGTCGATGATGACGCTGCTGACATTCTGTTTTTCCAGTTTCTGCAGTTGCACTTTGACATCGTCTGTCAAACCCACATAGAAGCCCGGAATATCCAGCACGCCGACTTTCTCTTTACCGACGGTCTTCACGCTCATTTTAACCGCGCGGTCTTCGAGACGAATACGTTCACGGGTCAACGTTACAGTACGGGTCTTGGTCCCTTTACCAGCAGGTAAAATTTCCAGACGAACTTTACTGCC  >  CP042583/1593986‑1594546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A