Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,606,750 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,606,7500AT99.7% 715.4 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (161/135);  minor base C (1/0);  total (162/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,606,7510GC99.7% 707.8 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (161/135);  minor base A (1/0);  total (162/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,606,7520TA99.7% 707.3 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (161/135);  total (162/135)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 297 total aligned reads displayed.

AACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTAGTCTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGAGCGCCCGTCGCTTACAATTTTTTAGTCATCAGTACAGCATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTAGTTTATTGTTAGTCGGTCAGCG‑TAGTAGTCAGGGTTGGCAAGGCGATATCATTCCATTACGCTAAGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAACCGTGGAT  >  CP042583/1606470‑1607029
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
aaCGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTg                                                                                                                                                                                                                                                                                   >  1:1637229/1‑289 (MQ=255)
                cagcAGCGTCATGGGGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGCTATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCg‑tt                                                                                                                                                                                                                                                                  <  2:1773222/286‑2 (MQ=255)
                         cATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCg‑ttcatcacag                                                                                                                                                                                                                                                          <  1:1111392/288‑10 (MQ=255)
                            ggTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCCGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCg‑ttcatcacagggtt                                                                                                                                                                                                                                                      >  1:1205074/1‑276 (MQ=255)
                                    tCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAgg                                                                                                                                                                                                                                               <  1:1391617/288‑1 (MQ=255)
                                        ggCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAg                                                                                                                                                                                                                                                                               <  2:183901/253‑1 (MQ=255)
                                        ggCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAg                                                                                                                                                                                                                                                                               >  1:183901/1‑253 (MQ=255)
                                                           tCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       >  1:1078876/1‑273 (MQ=255)
                                                           tCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       <  2:1078876/273‑1 (MQ=255)
                                                           tCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCACCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTag                                                                                                                                                                                                                         >  1:1497302/1‑286 (MQ=255)
                                                                gtggtCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCtttt                                                                                                                                                                                                                   <  2:827711/288‑1 (MQ=255)
                                                                      tgagtataaaagccaGGTTTGGATATGGACCCGACCTGTTAACTGTTTACTCCAGGTCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGcc                                                                                                                                                                                                             <  2:117582/274‑1 (MQ=255)
                                                                         gAACAACCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGa                                                                                                                                                                                                         <  2:680626/289‑1 (MQ=255)
                                                                           acaacCGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTTTTGTTAGTCTGTCAGCG‑TTCATCACAGGTTTGGCAAGGCGATATCATTCCATTACCCTAGGCTTTTTCGGCCTGGat                                                                                                                                                                                                        >  2:1993618/1‑287 (MQ=255)
                                                                              acagCAAGTTATGGAGATTGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACGCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATTGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATg                                                                                                                                                                                                    <  1:1663142/286‑1 (MQ=255)
                                                                               ccGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTTGGCCTGGAGCATg                                                                                                                                                                                                    >  1:174856/1‑288 (MQ=255)
                                                                                cGCAAGGTATGGATATGGACCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGc‑c                                                                                                                                                                                                 <  1:2092282/289‑1 (MQ=255)
                                                                                       tatggatatggaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCa                                                                                                                                                                                                                                  <  1:1019887/250‑1 (MQ=255)
                                                                                         tggatatggaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTgcg                                                                                                                                                                                         >  2:1627843/1‑288 (MQ=255)
                                                                                              atggaCCCGCCCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   <  1:1163765/289‑1 (MQ=255)
                                                                                              atggaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   <  2:1466516/289‑1 (MQ=255)
                                                                                                 gaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCg‑t                                                                                                                                                                                                                                                                   <  1:1006125/207‑1 (MQ=255)
                                                                                                 gaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGCTATCATTCCATTACGCTAGGCTTTTTCGGCCTTGTGCATGC‑CATGTTGCGCCTTTTCGa                                                                                                                                                                                >  1:819746/1‑289 (MQ=255)
                                                                                                 gaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTTGGCCTGGAGCATGC‑CATGTTTCGCCTTATCGa                                                                                                                                                                                >  1:974689/1‑289 (MQ=255)
                                                                                                 gaCCCGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   <  2:1757497/286‑1 (MQ=255)
                                                                                                     cGACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACa                                                                                                                                                                            <  1:1234421/289‑1 (MQ=255)
                                                                                                      gACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGGTGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAg                                                                                                                                                                           >  2:84525/1‑289 (MQ=255)
                                                                                                      gACCTGTTCACTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGAGGAATATGGTCGTCTCATCGTTCGCGCCGATCGGGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATcataacaa                                                                                                                                                                           >  1:2039500/1‑282 (MQ=255)
                                                                                                       acctgttcacTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACCGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGACCATGC‑CATGTTGCGAATTATCGAtcaaga                                                                                                                                                                          >  2:1043022/10‑284 (MQ=255)
                                                                                                       acctgttcacTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCttttt                                                                                                                                                                                                                  >  1:26656/10‑250 (MQ=255)
                                                                                                       acctgttcacTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGGGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCGTTACGCTAGGGTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAGCGATACAGa                                                                                                                                                                          >  1:460756/10‑289 (MQ=255)
                                                                                                                      actacAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTTCTGATGGCAAATGCCCGTGGTAACAGTTCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCCACG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGCACAT‑TTCCGCATTATCGATACAGAAACCTACGGTTTTCa                                                                                                                                                           >  2:1336999/1‑289 (MQ=255)
                                                                                                                      actacAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       <  1:1098324/214‑1 (MQ=255)
                                                                                                                      actacAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGtt                                                                                                                                                                                            <  1:1849192/256‑1 (MQ=255)
                                                                                                                      actacAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCa                                                                                                                                                           >  1:1767/1‑289 (MQ=255)
                                                                                                                        tacAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGCTGAATATGGTCGTCTCATCGTGCGCGCCGATCGTGGTTCATTATCGTTAGTCGGt                                                                                                                                                                                                                                                                          >  2:1976740/1‑178 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       <  2:45349/207‑1 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       >  1:45349/1‑207 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGc                                                                                                                                                                                                                            >  2:1428877/1‑218 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGa                                                                                                                                                                                                         >  1:844121/1‑237 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGTagggaggg                                                                                                                                                    >  1:1336289/1‑289 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCaggggggg                                                                                                                                                    >  1:2136912/1‑289 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCagggaggg                                                                                                                                                    >  1:998410/1‑289 (MQ=255)
                                                                                                                             ggCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCagggaggg                                                                                                                                                    >  2:807424/1‑289 (MQ=255)
                                                                                                                              gCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCagggaggg                                                                                                                                                    <  1:2206354/288‑1 (MQ=255)
                                                                                                                                  tGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCTATACAGAAACCTGCGGTCTGCAGGGAGGGATCgg                                                                                                                                               >  2:1103808/1‑288 (MQ=255)
                                                                                                                                             aCCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCa                                                                                                                                                                                                                                       >  1:496543/1‑191 (MQ=255)
                                                                                                                                             aCCCGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   >  1:675492/1‑242 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCttttt                                                                                                                                                                                                                  <  1:1285213/211‑1 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGcc                                                                                                                                                                                                             >  2:1365083/1‑216 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATg                                                                                                                                                                                              <  1:347810/230‑1 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   >  1:718153/1‑241 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   <  2:718153/241‑1 (MQ=255)
                                                                                                                                              cccGACCTGCTGGCGTCGGCCCGTCGCTTACAATTTTTTTCACATCAGTACCCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATg                                                                                                                                                                                              >  2:347810/1‑230 (MQ=255)
                                                                                                                                                       ctggcgtcggcCCGTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAACATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGAAACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTTAATTTGCCCCTGTTGATg                                                                                                                           >  2:1284130/10‑288 (MQ=255)
                                                                                                                                                                    gTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCttttt                                                                                                                                                                                                                  >  1:246364/1‑189 (MQ=255)
                                                                                                                                                                    gTCGCTTACAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGaaaa                                                                                                             <  1:807424/289‑1 (MQ=255)
                                                                                                                                                                           aCAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGAt                                                                                                                                         >  1:1686020/1‑254 (MQ=255)
                                                                                                                                                                           aCAATTTTTTTCACATCAGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGAt                                                                                                                                         <  2:1686020/254‑1 (MQ=255)
                                                                                                                                                                                    ttcacatcaGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGa                                                                                             <  1:649832/285‑1 (MQ=255)
                                                                                                                                                                                    ttcacatcaGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGa                                                                                             <  1:1430412/285‑1 (MQ=255)
                                                                                                                                                                                    ttcacatcaGTACTCGATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGa                                                                                             <  2:1713926/285‑1 (MQ=255)
                                                                                                                                                                                                   gaTTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACCGAAACCTGCGGTTTGCAGGGAGGGCTCGTTGAGATTGCCTCTGTTCATGTCATTGACGGAAAAATTGTCAACTCCCTGAGCTCCCTGGTgcgc                                                                               >  2:2142309/2‑288 (MQ=255)
                                                                                                                                                                                                   gaTTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTgcgc                                                                               >  1:85509/2‑288 (MQ=255)
                                                                                                                                                                                                     ttGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGTCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGGGCGccc                                                                             >  2:2099877/1‑288 (MQ=255)
                                                                                                                                                                                                      tGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCa                                                                                                                                                                                       >  1:1996801/1‑181 (MQ=255)
                                                                                                                                                                                                       gaggTGCGGATGGCAAATGCCCGTCGTAACAGTGCACTATGGGATGAATAGGGGCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGGTGGCAAGGCGAGATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTGGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCg                                                                           <  2:2193680/285‑1 (MQ=255)
                                                                                                                                                                                                        ccGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTg                                                                                                                                                             >  2:1312144/1‑205 (MQ=255)
                                                                                                                                                                                                        ccGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTTACGGAAAAATCGTCAACCCCATGAGCCACCTGGTCCGCCCCGa                                                                          >  1:514769/1‑288 (MQ=255)
                                                                                                                                                                                                          gTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCg                                                                       <  1:426197/289‑1 (MQ=255)
                                                                                                                                                                                                           tGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCAATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAg                                                                                            >  2:1565211/1‑267 (MQ=255)
                                                                                                                                                                                                                 tGGCCAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTAt                                                                 <  1:538475/288‑1 (MQ=255)
                                                                                                                                                                                                                  ggCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTa                                                               >  2:425912/1‑289 (MQ=255)
                                                                                                                                                                                                                             gTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   >  2:962106/1‑162 (MQ=255)
                                                                                                                                                                                                                             gTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTAt                                                                                                                                                                                   <  1:962106/162‑1 (MQ=255)
                                                                                                                                                                                                                             gTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCg                                                    >  1:754281/1‑289 (MQ=255)
                                                                                                                                                                                                                                     aGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTg                                                                                                                              >  2:2000240/1‑207 (MQ=255)
                                                                                                                                                                                                                                       tGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTc                                          >  1:1572786/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGAtt                                           <  2:243519/287‑1 (MQ=255)
                                                                                                                                                                                                                                         cACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCa                                                                                                      >  1:149473/1‑227 (MQ=255)
                                                                                                                                                                                                                                         cACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTg                                                                                  <  2:740399/247‑1 (MQ=255)
                                                                                                                                                                                                                                         cACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCa                                         >  2:922933/1‑288 (MQ=255)
                                                                                                                                                                                                                                         cACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCAGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAGAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCa                                         >  1:1278624/1‑288 (MQ=255)
                                                                                                                                                                                                                                            tATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGc                                     >  2:2247157/1‑289 (MQ=255)
                                                                                                                                                                                                                                              tGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGTTCAGCGTTAATCAT‑AGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCAt                                   <  1:1709036/289‑1 (MQ=255)
                                                                                                                                                                                                                                              tGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTTCGCCCCGATCGCCCTATTAGTCCACAAGCGATGGCGATTCATCGcc                                    >  2:2033157/1‑287 (MQ=255)
                                                                                                                                                                                                                                                 gATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTgaga                                                                                                                                          <  2:273386/183‑1 (MQ=255)
                                                                                                                                                                                                                                                 gATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGAGGGAAAAATCGTCAACCCCATGAGCCACCTGGTGAGCCCCGATCGTCCTATTAGTCCACAAGCGATGTCGATTCAGCgcagca                                 >  2:476195/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 gATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGACGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGc                                                                                                                                      >  2:1228947/1‑187 (MQ=255)
                                                                                                                                                                                                                                                   tGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAAGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCAcc                               <  1:1043022/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      atatGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGaa                            >  1:1024841/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        atGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTACACAAGCGATGGCGATTCCTCGACTCACCGAAGc                          >  2:1014982/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         tGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCAGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATAC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCa                        <  2:256019/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTgcg                                                                                <  2:981864/232‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCg                                                                       >  2:149626/1‑241 (MQ=255)
                                                                                                                                                                                                                                                           gtcgtcTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAAcccc                                                                                                 <  1:2026015/214‑1 (MQ=255)
                                                                                                                                                                                                                                                               tctcATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTg                                                                                                                                                             <  2:904721/150‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGAt             <  2:509394/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cgcgCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAAcc        <  2:577286/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cgcCGATCGTGGTTCATTATTGTTAGTCGGTCAGCG‑TTCATCACAGGGTTGGCAAGGCGATATCATTCCATTACGCTAGGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAACCGt      >  1:303982/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
AACGCCTGGGATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGCAAGGTATGGATATGGACCCGACCTGTAGTCTGTTTACTACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGAGCGCCCGTCGCTTACAATTTTTTAGTCATCAGTACAGCATTGCCGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAATATGGTCGTCTCATCGTTCGCGCCGATCGTGGTAGTTTATTGTTAGTCGGTCAGCG‑TAGTAGTCAGGGTTGGCAAGGCGATATCATTCCATTACGCTAAGCTTTTTCGGCCTGGAGCATGC‑CATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATTGCCTCTGTTGATGTCATTGACGGAAAAATCGTCAACCCCATGAGCCACCTGGTGCGCCCCGATCGTCCTATTAGTCCACAAGCGATGGCGATTCATCGCATCACCGAAGCCATGGTCGCCGATAAACCGTGGAT  >  CP042583/1606470‑1607029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A