Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,610,846 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,610,8460AT99.6% 550.6 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (139/92);  minor base G (1/0);  total (140/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,610,8470CG99.1% 550.2 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (138/92);  minor base T (2/0);  total (140/92)
Fisher's exact test for biased strand distribution p-value = 5.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,610,8480TA99.6% 550.8 / NA 232intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (139/92);  minor base C (1/0);  total (140/92)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 232 total aligned reads displayed.

CTGTATATCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAG  >  CP042583/1610568‑1611123
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
cTGTATATCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTat                                                                                                                                                                                                                                                                             <  1:998582/289‑1 (MQ=255)
cTGTATATCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTat                                                                                                                                                                                                                                                                             <  1:1521504/289‑1 (MQ=255)
 tGTATATCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAG‑CATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTatca                                                                                                                                                                                                                                                                           >  1:525954/1‑289 (MQ=255)
   tataTCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTatca                                                                                                                                                                                                                                                                           >  1:1877046/1‑288 (MQ=255)
      atCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCAGCtt                                                                                                                                                                                                                                                                       >  1:37548/1‑289 (MQ=255)
          ggTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTAc                                                                                                                                                                                                                                                                    >  1:1592051/1‑288 (MQ=255)
           gTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGACAATCGGCACTTTTACCCCGCACGGTTAGCGGTACGTACCATTTATCATCTTTAcc                                                                                                                                                                                                                                                                   >  2:150745/1‑288 (MQ=255)
           gTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCt                                                                                                                                                                                                                                                                        >  1:1909341/1‑283 (MQ=255)
           gTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTAcc                                                                                                                                                                                                                                                                   >  1:1709549/1‑288 (MQ=255)
           gTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTAc                                                                                                                                                                                                                                                                    >  1:2116601/1‑287 (MQ=255)
           gTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTAc                                                                                                                                                                                                                                                                    >  1:1739302/1‑287 (MQ=255)
             gATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTg                                                                                                                                                                                                                                                                >  2:1284284/1‑289 (MQ=255)
             gATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTg                                                                                                                                                                                                                                                                >  1:489431/1‑289 (MQ=255)
             gATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCCGACCTGCTAATGAATACCGCCACTTTTACCACGCACCGTTCCCCGTACTTACCCTTTTTCACCTTTccccc                                                                                                                                                                                                                                                                 >  2:1393596/1‑287 (MQ=255)
               tAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTat                                                                                                                                                                                                                                                                             <  1:2046774/274‑1 (MQ=255)
                             gTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTg                                                                                                                                                                                                                                                >  1:229650/1‑289 (MQ=255)
                             gTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTg                                                                                                                                                                                                                                                >  2:1748597/1‑289 (MQ=255)
                                  agtagtTTGTCGTTTTGATTGGCATTGTATGGTGCTGATTGCCCGATGCGACGCTGGTGGGTCTGCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCa                                                                                                                                                                                                                                           <  2:734792/289‑1 (MQ=255)
                                              ttttGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATc                                                                                                                                                                                                                               >  1:254305/1‑289 (MQ=255)
                                                         aTTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGACGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGa                                                                                                                                                                                                                    <  1:1628368/289‑1 (MQ=255)
                                                                 aTGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAAttttt                                                                                                                                                                                                            >  1:793082/1‑289 (MQ=255)
                                                                  tGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGAccc                                                                                                                                                                                                                                            <  2:694477/256‑1 (MQ=255)
                                                                  tGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCATGACCGGCAAtttttt                                                                                                                                                                                                           >  1:1021904/1‑289 (MQ=255)
                                                                  tGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCAGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCAttt                                                                                                                                                                                                                                                                               <  2:199995/221‑1 (MQ=255)
                                                                       aTTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGa                                                                                                                                                                                                                                                               >  2:341803/1‑232 (MQ=255)
                                                                                tGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACa                                                                                                                                                                                                                  >  1:954298/1‑268 (MQ=255)
                                                                                     cGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAAcgcg                                                                                                                                                                                         >  2:555551/1‑288 (MQ=255)
                                                                                         gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCAcg                                                                                                                                                                                    <  1:144751/289‑1 (MQ=255)
                                                                                               tcttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGAttt                                                                                                                                                                              >  1:1328932/1‑289 (MQ=255)
                                                                                                 ttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGa                                                                                                                                                                                                                                                               >  1:414555/1‑206 (MQ=255)
                                                                                                  tctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTttgt                                                                                                                                                                           >  2:799670/1‑289 (MQ=255)
                                                                                                           tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATc                                                                                                                                                                   >  2:429670/1‑288 (MQ=255)
                                                                                                           tACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATCTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATc                                                                                                                                                                   >  1:2157686/1‑288 (MQ=255)
                                                                                                            aCGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTttgt                                                                                                                                                                           <  1:668655/279‑1 (MQ=255)
                                                                                                             cGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACg                                                                                                                                                                >  1:721613/1‑289 (MQ=255)
                                                                                                                  gtggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACACTTTTTTGATCATCTGCCCACCGCGCCACGCGATTTTGTTGATAATCACGtttt                                                                                                                                                            >  1:1956427/1‑288 (MQ=255)
                                                                                                                  gtggtgCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGtttt                                                                                                                                                            >  1:2194471/1‑288 (MQ=255)
                                                                                                                        cGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTat                                                                                                                                                                                                                                                                             <  1:464412/169‑1 (MQ=255)
                                                                                                                          ttCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAGGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGa                                                                                                                                                                                                                                 >  2:78365/1‑211 (MQ=255)
                                                                                                                          ttCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAGGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGa                                                                                                                                                                                                                                 <  1:78365/211‑1 (MQ=255)
                                                                                                                             tGGGGCGGAAAGGGAACTCGCGCCGCAACCGCCAACAGTCAACCGAATTATCAGAAGCCATGAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCa                                                                                                                                                <  2:1956427/289‑1 (MQ=255)
                                                                                                                                    gACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCTTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCCCCCGATTTGGTTGATAACCCCGTTTTACGTCCGCGGCAAGTCCg                                                                                                                                          >  2:1681700/1‑288 (MQ=255)
                                                                                                                                    gACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCg                                                                                                                                          >  1:156168/1‑288 (MQ=255)
                                                                                                                                    gACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCg                                                                                                                                          >  1:841992/1‑288 (MQ=255)
                                                                                                                                    gACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCg                                                                                                                                          >  1:1805371/1‑288 (MQ=255)
                                                                                                                                     aCAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCgg                                                                                                                                         <  2:1877046/288‑1 (MQ=255)
                                                                                                                                     aCAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCgg                                                                                                                                         <  2:229650/288‑1 (MQ=255)
                                                                                                                                     aCAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCgg                                                                                                                                         <  2:2194471/288‑1 (MQ=255)
                                                                                                                                     aCAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCGGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACTTTTTACGCTCGCCGCAATTCCCgc                                                                                                                                        >  2:1136636/1‑289 (MQ=255)
                                                                                                                                      cAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCGCTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGgca                                                                                                                                       <  2:252746/289‑1 (MQ=255)
                                                                                                                                      cAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGgca                                                                                                                                       <  1:702495/289‑1 (MQ=255)
                                                                                                                                         ggCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGAt                                                                                                                                                                       <  1:873435/254‑1 (MQ=255)
                                                                                                                                             cTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCa                                                                                                                                <  2:399908/289‑1 (MQ=255)
                                                                                                                                             cTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCa                                                                                                                                <  2:841992/289‑1 (MQ=255)
                                                                                                                                                    cgcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTc                                                                                                                         >  1:1824109/1‑289 (MQ=255)
                                                                                                                                                     gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTca                                                                                                                        <  1:103896/289‑1 (MQ=255)
                                                                                                                                                     gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTca                                                                                                                        <  1:325852/289‑1 (MQ=255)
                                                                                                                                                     gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTca                                                                                                                        <  1:291651/289‑1 (MQ=255)
                                                                                                                                                     gcATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTca                                                                                                                        <  1:1482371/289‑1 (MQ=255)
                                                                                                                                                        tCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTcac                                                                                                                       >  1:177095/1‑287 (MQ=255)
                                                                                                                                                               aCAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGa                                                                                                              <  1:389215/289‑1 (MQ=255)
                                                                                                                                                               aCAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGa                                                                                                              <  1:2229991/289‑1 (MQ=255)
                                                                                                                                                                cAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCa                                                                                                                                >  1:167027/1‑270 (MQ=255)
                                                                                                                                                                   tCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGt                                                                                                          >  2:1629036/1‑289 (MQ=255)
                                                                                                                                                                      aTCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGAc                                                                                                       <  1:1115740/289‑1 (MQ=255)
                                                                                                                                                                               tCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGAccgactt                                                                                                 >  1:2099601/1‑280 (MQ=255)
                                                                                                                                                                                               ccgcTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCa                                                                              >  1:1100130/1‑289 (MQ=255)
                                                                                                                                                                                                  cTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCg                                                                           >  2:192091/1‑289 (MQ=255)
                                                                                                                                                                                                            gCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGAccgacttgc                                                                                               >  2:2115464/1‑251 (MQ=255)
                                                                                                                                                                                                             ccATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCCCTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTTCTGCAAACTGACCCACGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGCTTTACGCTCGCGGCCATTCCGGCAGCCTTCAAATCTTCCCACTCTGGGAAAGTTACCTGCTTGCTTGGTTCATTCTTGGACACGAAAactagccc                                                                >  2:1652483/1‑283 (MQ=255)
                                                                                                                                                                                                             ccATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAactgatg                                                                 >  2:1250231/1‑283 (MQ=255)
                                                                                                                                                                                                              cATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCTGCACTTTTACCACGCACCGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGCCAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTTTTGATAATCACGTTTTACGATCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAactgatgcg                                                               <  2:949969/289‑8 (MQ=255)
                                                                                                                                                                                                              cATTCCCGCGTTGCAGTCCGCGCTGACCTGGTAATAAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAactgatgcg                                                               <  2:1554997/289‑8 (MQ=255)
                                                                                                                                                                                                                  cccGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGa                                                                                                                                                                                                                    >  2:2090602/1‑136 (MQ=255)
                                                                                                                                                                                                                     gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGAACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                        <  2:793082/289‑1 (MQ=255)
                                                                                                                                                                                                                           cAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCa                                                                                                                                >  1:1383643/1‑211 (MQ=255)
                                                                                                                                                                                                                           cAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCa                                                                                                                                <  2:1383643/211‑1 (MQ=255)
                                                                                                                                                                                                                               ccACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACcaacaa                                              <  1:1284284/289‑1 (MQ=255)
                                                                                                                                                                                                                               ccACGCTGACCTGGTAATACATTTCGGCCCTTTTACAACGTACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACcaacaa                                              <  2:1592051/289‑1 (MQ=255)
                                                                                                                                                                                                                                   gCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                        >  1:803670/1‑275 (MQ=255)
                                                                                                                                                                                                                                   gCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTCTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCaaaaaccg                                           >  2:59922/1‑286 (MQ=255)
                                                                                                                                                                                                                                       aCCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCa                                                                                                                                                                  <  2:1809717/165‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaa                                     >  1:878121/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGA‑CATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                        <  2:1111038/269‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGA‑CATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                        >  1:915565/1‑269 (MQ=255)
                                                                                                                                                                                                                                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGA‑CATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                        <  2:915565/269‑1 (MQ=255)
                                                                                                                                                                                                                                            gTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGGAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaaaaa                                  >  2:470188/1‑288 (MQ=255)
                                                                                                                                                                                                                                            gTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGa                                                                                                              >  2:129906/1‑212 (MQ=255)
                                                                                                                                                                                                                                                tGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGccc                             <  2:1328932/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGccc                             >  2:2016565/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTgg                                                                                >  1:2005495/1‑232 (MQ=255)
                                                                                                                                                                                                                                                      tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCttt                       >  1:305592/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCtttt                      >  2:811292/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATAATCTGCCCAACGCGCCACGCGATTTTGTTGATAATTACGTTTTACGCTCGCGGCAATTCTGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGCCCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGAGGCGCAGGCAGAAACAAACAACAGCCCTAAAAACGCCCCTAtttt                      >  2:295403/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGAATCGGCATGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGAGTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACAGTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACACACAACAGCGCTAAAAACGCCCCCCtttt                      >  2:667498/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   cacgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGttttt          <  1:245180/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTtct        >  1:9815/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       cacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACg                                >  2:1852909/1‑263 (MQ=255)
                                                                                                                                                                                                                                                                       cacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGttt            >  2:836984/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                            ttAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAg  <  2:878121/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
CTGTATATCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAG  >  CP042583/1610568‑1611123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A