Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,627,636 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,627,6360GC99.3% 661.5 / NA 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (142/135);  total (142/137)
Fisher's exact test for biased strand distribution p-value = 2.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,627,6370CG99.6% 655.9 / NA 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (141/136);  total (142/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,627,6380TA99.3% 651.4 / NA 279intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (140/137);  minor base C (2/0);  total (142/137)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01

Only 100 of 280 total aligned reads displayed.

AATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGGCTTTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGCACTGTCAGCGTTCTTTGCCATA  >  CP042583/1627357‑1627915
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
aaTCTGCTTCTGATATTTATAAAGACGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGACTTGTTAAATAGCAATCCGAATGCAAAACTCACTATCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGTGAGCGTAAAACCGCCACGCCAGCCAGTTTGTGGCAGCCTCCGGGTTTGTTGTTGATTCATGCGGTGGGGGTGGCAACGTATCAGCCGGAAGTGACCGACGCGGGATAACTTATAGCAGCCCCCCTCTCGCCCGGTTCCCCCgggatgcgct                                                                                                                                                                                                                                                                                   >  2:1585162/1‑280 (MQ=255)
     gTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCt                                                                                                                                                                                                                                                                              >  1:1316794/1‑288 (MQ=255)
         ttGATATGGATAAAGAACAGCTATTGATTCCGGTGGGTGAAATAGTGACGTTTGGAGAATTGTTAAAGAGCAATCCGAATGCAAAACTCACTTACTGTAAATTCTTGTTCCTGGGTTCTATTCCGTGGGGGCGTAAAACCGTCACGCCTGCCAGTTTGTGGCATCATCCGGGTTTTGTGTTGATTCCTGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATc                                                                                                                                                                                                                                                                         <  2:2193585/289‑1 (MQ=255)
            atgtttATAAGGAAGCGCTATGTATTCCGGTGGGGGAAATAGAGACGTTTGGCGAATTGTTAAATAGCAATCCGAATGCAAACCTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCa                                                                                                                                                                                                                                                                      <  2:1142808/286‑1 (MQ=255)
                   taAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGAc                                                                                                                                                                                                                                                               <  1:560989/289‑1 (MQ=255)
                        aagagttATGTATTCCGGTGGGGGAAAAAGGGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACg                                                                                                                                                                                                                                                          <  2:2115906/283‑1 (MQ=255)
                        aagCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACg                                                                                                                                                                                                                                                          >  2:1466813/1‑289 (MQ=255)
                        aagCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCACGCGCGATTCGCTCCACTGCATCGCATTCTCACTAACg                                                                                                                                                                                                                                                          >  2:1174398/1‑289 (MQ=255)
                           cgcTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGCCCGAGGCGGTATAACTTAACGCAGGCGCCCTCTCGCCCGGTTACGCCGCGATTCGCCCATCTGCATCGCATTCTGACTAActgg                                                                                                                                                                                                                                                        >  2:1391326/1‑285 (MQ=255)
                           cgcTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTg                                                                                                                                                                                                                                                        >  1:2142391/1‑288 (MQ=255)
                           cgcTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTg                                                                                                                                                                                                                                                        >  1:892972/1‑288 (MQ=255)
                           cgcAATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAAAGCAGTCGCCCTCTCGCCAGGTTCACCCGCGATTCGCTCACCTGCATCCCAGTCAGCCTAACGTg                                                                                                                                                                                                                                                        >  2:1397472/1‑288 (MQ=255)
                            gcTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTgg                                                                                                                                                                                                                                                       <  1:112980/288‑1 (MQ=255)
                              tATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCa                                                                                                                                                                                                                                                     <  1:1746223/288‑1 (MQ=255)
                                     tCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCACGCCAGGTTCAGCCGCGATCTGCTCATCTGCATCGCCTTCTGCCTAACGTGGCAGTGGGttg                                                                                                                                                                                                                                             >  2:1649/1‑287 (MQ=255)
                                       cGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATa                                                                                                                                                                                                                                           >  1:602259/1‑289 (MQ=255)
                                          tgggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGGGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCGGCGATTCGCTCATCTGCATCGCATTCTGACTAAAGTTGCAGTGGGCGCTAGCa                                                                                                                                                                                                                                        >  2:909466/1‑289 (MQ=255)
                                          tgggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATc                                                                                                                                                                                                                                                                         >  1:2155094/1‑256 (MQ=255)
                                          tgggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCa                                                                                                                                                                                                                                        >  1:659147/1‑289 (MQ=255)
                                          tgggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCa                                                                                                                                                                                                                                        >  1:1142648/1‑289 (MQ=255)
                                          tgggcgAAATAGAGACGTTCGGAGCCTTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGGTCTATTCCGCGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGACGGCGGGGAAACGCCTCCGCCGGATCTGAACGAGGCTTTATACATTCACGCAATCTCCCTCTCGCCATGTTCAGCCGCGATTCGCTCATCATCATCCCATTCTGACTAACGTGGCAGTGGGTGTTAGc                                                                                                                                                                                                                                         >  2:1874818/1‑288 (MQ=255)
                                            ggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAGCTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCCATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCGGTGGGTGATAGCaa                                                                                                                                                                                                                                       >  2:950215/1‑288 (MQ=255)
                                            ggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCaa                                                                                                                                                                                                                                       >  1:320880/1‑288 (MQ=255)
                                            ggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCaa                                                                                                                                                                                                                                       >  1:2176793/1‑288 (MQ=255)
                                              tgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACCCACTTTCTGGAACTTCTGGTTCCTGGGTTCTATTCCGTGGGAACGTAAAACCGTCACGCCCGCCAGTTTGTGGCATCATCCGGGTTGGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACGTAACGCAGTCGCCCTCCCGCCAGGTTCAGCCGCGATTCGCTAAGCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGagtggaatg                                                                                                                                                                                                                                     >  2:1739804/1‑280 (MQ=255)
                                                       gaCGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCa                                                                                                                                                                                                                            >  2:1353604/1‑288 (MQ=255)
                                                                    ttGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGAAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCg                                                                                                                                                                                                              >  1:233860/1‑288 (MQ=255)
                                                                       ttAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAGCCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCTCCAGCGCAT‑CGGCCGCCTCCGcccg                                                                                                                                                                                                          >  2:1970485/1‑287 (MQ=255)
                                                                                 aTCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCg                                                                                                                                                                                                >  1:265960/1‑289 (MQ=255)
                                                                                  tcgtaaTGCAAAACTCACTTTCTGGAAATGTTGGTTCCGGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCgg                                                                                                                                                                                               <  2:2142391/285‑1 (MQ=255)
                                                                                   ccGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCggg                                                                                                                                                                                              <  1:1642040/289‑1 (MQ=255)
                                                                                      aaTGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CCGCGGCATCCGCCTGTGGATTCGCGGGCA‑g                                                                                                                                                                                          >  1:850943/1‑289 (MQ=255)
                                                                                            aaaCTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAACACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTCGCGGGCA‑GTTTcc                                                                                                                                                                                     >  2:2064875/1‑287 (MQ=255)
                                                                                             aaccaaccttCTTGAAGTTCTGGTTCCTTGGTTCTATTCGGGGTGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGc                                                                                                                                                                                   <  2:2022083/281‑1 (MQ=255)
                                                                                             aaCTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGc                                                                                                                                                                                   <  1:1943861/289‑1 (MQ=255)
                                                                                              acttacttTCTGGAAAGTCGTGTTCCTGGGTTCTATTCCGTGGGAGCGTTAAACCGTCACGCCAGCCAGTTGCTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  <  2:741172/289‑1 (MQ=255)
                                                                                              aCTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  <  2:65627/289‑1 (MQ=255)
                                                                                              aCTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  <  1:306723/289‑1 (MQ=255)
                                                                                                  aCTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGAGTCGCCCATCTGCATCGCATTCTGACCAACTTGTCAGTGGGTGATACGAATCCGCCGCCAATGCGGC‑GCACTCGCCTGTGGATTTGGGGGAATGTTTC‑GCAAggg                                                                                                                                                                              >  2:1724582/1‑288 (MQ=255)
                                                                                                    tttCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGc                                                                                                                                                                            <  2:602259/289‑1 (MQ=255)
                                                                                                       cTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGa                                                                                                                                                                         <  1:1466813/289‑1 (MQ=255)
                                                                                                         ggAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGAcc                                                                                                                                                                       <  2:315587/289‑1 (MQ=255)
                                                                                                                    ttCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGc                                                                                                                                                                                             >  2:1077016/1‑257 (MQ=255)
                                                                                                                    ttCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCAc                                                                                                                                                            <  2:892972/289‑1 (MQ=255)
                                                                                                                        tGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTgg                                                                                                                                                        <  1:1901003/289‑1 (MQ=255)
                                                                                                                           gTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGc                                                                                                                                                                                   <  1:1204402/259‑1 (MQ=255)
                                                                                                                               tATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCACAGGCTGCACCTGGCtgtttt                                                                                                                                                 >  2:2161306/1‑289 (MQ=255)
                                                                                                                                   ccGTGGGGGCGTAAAGCGGTGACGCCAGCCAGTTTGTGGCAGCGTCCGGGTTTGGTGTTGATTCATGCGGAGGGGGTGGAAACGCACCAGCCGGAACTGGCCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             <  2:1232891/289‑1 (MQ=255)
                                                                                                                                   ccGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             <  2:1316794/289‑1 (MQ=255)
                                                                                                                                      tGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCCCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             >  1:1252714/1‑286 (MQ=255)
                                                                                                                                         gAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAAc                                                                                                                                                                                                                                                           >  1:878768/1‑175 (MQ=255)
                                                                                                                                         gAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAAc                                                                                                                                                                                                                                                           <  2:878768/175‑1 (MQ=255)
                                                                                                                                         gAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCCTCCCCTGGCTTTTTTCGGCCCTGc                                                                                                                                        >  2:2001979/1‑288 (MQ=255)
                                                                                                                                           gCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCa                                                                                                                                      <  1:656207/288‑1 (MQ=255)
                                                                                                                                           gCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCa                                                                                                                                      <  1:2001979/288‑1 (MQ=255)
                                                                                                                                              tAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAAta                                                                                                                                   >  1:1394526/1‑288 (MQ=255)
                                                                                                                                                      tCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  >  1:1052378/1‑233 (MQ=255)
                                                                                                                                                      tCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  <  2:1052378/233‑1 (MQ=255)
                                                                                                                                                              gccagTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAAt                                                                                                                                                                                                                                      <  2:543191/175‑1 (MQ=255)
                                                                                                                                                              gccagTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAAt                                                                                                                                                                                                                                      >  1:543191/1‑175 (MQ=255)
                                                                                                                                                                        ggCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGt                                                                                                        >  1:1576915/1‑289 (MQ=255)
                                                                                                                                                                           atcatcCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGcc                                                                                                     <  2:1541532/289‑1 (MQ=255)
                                                                                                                                                                             catcCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCCGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCG‑CTTTCAGCACGGTTCGGACCATATTCTCCACCTTGCTTTTTTCGGCACTTCCAATACCCACCACCTTTTGCTTTCCCCGACGTGcct                                                                                                    >  2:1692894/1‑287 (MQ=255)
                                                                                                                                                                             catcCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             <  2:266352/247‑1 (MQ=255)
                                                                                                                                                                              ttcCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCcgcg                                                                                                  <  1:909466/288‑1 (MQ=255)
                                                                                                                                                                                   ggTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCggg                                                                                                                                                                                              >  1:722731/1‑193 (MQ=255)
                                                                                                                                                                                         gtgtTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGc                                                                                                                    <  1:475298/260‑1 (MQ=255)
                                                                                                                                                                                          tgtTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCggg                                                                                                                                                                                              >  1:506209/1‑186 (MQ=255)
                                                                                                                                                                                          tgtTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCcgcg                                                                                                  >  1:142736/1‑277 (MQ=255)
                                                                                                                                                                                             tGATTCATGCGGAGGGGGTGGAACCCCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGc                                                                                   <  2:660082/289‑1 (MQ=255)
                                                                                                                                                                                             tGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGc                                                                                   <  1:2089505/289‑1 (MQ=255)
                                                                                                                                                                                                    tGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTgg                                                                                                                                                                                                                                                       >  1:1285345/1‑120 (MQ=255)
                                                                                                                                                                                                    tGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTgg                                                                                                                                                                                                                                                       <  2:1285345/120‑1 (MQ=255)
                                                                                                                                                                                                         agggagTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             >  1:1730299/1‑219 (MQ=255)
                                                                                                                                                                                                               tGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATa                                                                                        >  2:43593/1‑266 (MQ=255)
                                                                                                                                                                                                                    aCGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCcac                                                            <  1:1981191/289‑1 (MQ=255)
                                                                                                                                                                                                                                gAACTGACCGGGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCa                                                                                                                                      <  2:1707122/203‑1 (MQ=255)
                                                                                                                                                                                                                                gAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCa                                                                                                                                      >  1:1707122/1‑203 (MQ=255)
                                                                                                                                                                                                                                      gccacggCTGTATAAATTAGCGCAGTCGCCCTCTGGCCAGGTTCATCCGCGATTCGCTCCTCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGTCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCgcgcgc                                          <  2:233860/284‑1 (MQ=255)
                                                                                                                                                                                                                                      aCCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCcgcgcg                                           >  2:838523/1‑288 (MQ=255)
                                                                                                                                                                                                                                           ggCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  >  2:192293/1‑148 (MQ=255)
                                                                                                                                                                                                                                           ggCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCa                                                                                                                                                                                  <  1:192293/148‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGcc                                    <  2:1129882/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGcc                                    <  2:481588/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGcc                                    <  1:770288/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       tAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAggg                         <  1:939576/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          cGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGc                                                                                                                                             >  2:513137/1‑170 (MQ=255)
                                                                                                                                                                                                                                                          cGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGctg                      >  1:100596/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          cGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGctg                      >  1:155389/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          cGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCCCCGCCACAATCGCCACACCGCCCGCCTGGCCCCGTTTCTGGGct                       >  2:71524/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          cGCAGTCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTGCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACCCCGCGCGCCTGGCCCAGTTTCAGGGctg                      >  1:117660/1‑287 (MQ=255)
                                                                                                                                                                                                                                                               tCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCa                                                                                                                                            <  1:1086523/166‑1 (MQ=255)
                                                                                                                                                                                                                                                               tCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGctgagtca                 >  1:1849903/1‑282 (MQ=255)
                                                                                                                                                                                                                                                               tCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGctgagtca                 >  1:519799/1‑282 (MQ=255)
                                                                                                                                                                                                                                                               tCGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGctgagtca                 >  1:1170714/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                cGCCCTCTCGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCTCCCCTGGCACGGTTTCCGGGctgagtcca                >  2:726683/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                       tcGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGCTGAGTCAGCGTTCtt         <  1:1344661/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cGCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGCTGAGTCAGCGTTCttt        <  1:1700197/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gCCAGGTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGCTGAGTCAGCGTTCTTTg       <  1:1806928/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gTTCAGCCGCGATTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTCCCGCGTATTCAAATCCTGGCAACTCCTGATTCACCGCCGCCCCAATCGCCACCCCCCCCGCCTGGCCCCGTTTTAGGGCTGCGTCAGCCTTCTTTGCCaca  >  2:1260969/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
AATTTGTTTTTGATATTTATAAAGAAGCGCTATGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCCGTGGGAGCGTAAAACCGTCACGCCAGCCAGTTTGTGGCATCATCCGGGTTTGGTGTTGATTCATGCGGAGGGAGTGGAAACGCCTCAGCCGGAACTGACCGAGGCGGTATAACTTAACGCAGTCGCCCTCTCGCCAGGTTCAGCCGGCTTTCGCTCATCTGCATCGCATTCTGACTAACGTGGCAGTGGGTGATAGCAATCGCCAGCGCAT‑CGGCGGCATCCGCCTGTGGATTAGCGGGCA‑GTTTCAGCAAGGTGCGGACCATATGCTGCACCTGGCTTTTTTCGGCACTGCCAATACCTACCACCGTTTGCTTTACCTGACGTGCCGCGTATTCAAATACTGGCAACTCCTGATTCACCGCCGCCACAATCGCCACGCCGCGCGCCTGGCCCAGTTTCAGGGCACTGTCAGCGTTCTTTGCCATA  >  CP042583/1627357‑1627915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A