Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,638,779 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,638,7790GC99.6% 523.1 / NA 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (95/128);  total (97/128)
Fisher's exact test for biased strand distribution p-value = 4.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,7800CG99.1% 526.4 / NA 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (95/127);  total (97/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,638,7810TA99.6% 537.0 / ‑5.4 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (96/128);  minor base . (1/0);  total (97/128)
Fisher's exact test for biased strand distribution p-value = 4.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 225 total aligned reads displayed.

TTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATAT  >  CP042583/1638499‑1639054
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                 
 tGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGACGGAAAGGCAAAATGCTGTATCCGACGTTTTa                                                                                                                                                                                                                                                                            >  2:1339330/1‑289 (MQ=255)
          aGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATTTAAGACt                                                                                                                                                                                                                                                                   >  2:1775641/1‑289 (MQ=255)
           gTGGCTTTTAAGGGTTGCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAAATGATCGTCAGTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGGAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGGGGCCGGAAAGGCAAAATGCTGTATCCAACGTTTTATggacgagtg                                                                                                                                                                                                                                                                  >  2:1045574/1‑281 (MQ=255)
                   tAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGcc                                                                                                                                                                                                                                                          <  2:1484268/289‑1 (MQ=255)
                               tACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAAccc                                                                                                                                                                                                                                               >  1:645176/1‑288 (MQ=255)
                                aCTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgc                                                                                                                                                                                                                                             <  1:316669/289‑1 (MQ=255)
                                  tGTTTCGGCCATTTCCTGGCGATTAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACccgccg                                                                                                                                                                                                                                           <  2:2203524/289‑1 (MQ=255)
                                    tttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCcgccgc                                                                                                                                                                                                                                          >  1:1709878/1‑288 (MQ=255)
                                     ttCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCgccgcc                                                                                                                                                                                                                                         >  1:378390/1‑288 (MQ=255)
                                      tCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGcca                                                                                                                                                                                                                                        >  1:426011/1‑288 (MQ=255)
                                                      gATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTa                                                                                                                                                                                                                        <  1:2035551/288‑1 (MQ=255)
                                                         gAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAGAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCa                                                                                                                                                                                                                     >  1:2045475/1‑288 (MQ=255)
                                                         gAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCa                                                                                                                                                                                                                     >  2:863518/1‑288 (MQ=255)
                                                             ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                                                <  2:1358331/289‑1 (MQ=255)
                                                             ttCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                                                <  1:815772/289‑1 (MQ=255)
                                                                  aCTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACaa                                                                                                                                                                                                           <  1:1593638/289‑1 (MQ=255)
                                                                      aTCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATaa                                                                                                                                                                                                        >  1:629483/1‑288 (MQ=255)
                                                                              tGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCg                                                                                                                                                                                               >  1:1701643/1‑289 (MQ=255)
                                                                                      ttGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTcc                                                                                                                                                                                       <  2:1861077/289‑1 (MQ=255)
                                                                                          cGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTc                                                                                                                                                                                    >  2:886493/1‑288 (MQ=255)
                                                                                            cTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCAGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCa                                                                                                                                                                                 >  1:848720/1‑289 (MQ=255)
                                                                                                            aaaTATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                                                 <  2:645176/289‑1 (MQ=255)
                                                                                                            aaaTATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                                                 <  2:1830712/289‑1 (MQ=255)
                                                                                                                     tAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTgg                                                                                                                                                        >  2:576329/1‑289 (MQ=255)
                                                                                                                      aGATGCCTTTAATTTAGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCTGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTTAACTTAAATTACTgg                                                                                                                                                        >  2:255542/1‑288 (MQ=255)
                                                                                                                                     aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                                                        >  1:690622/1‑289 (MQ=255)
                                                                                                                                     aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                                                        >  2:1529400/1‑289 (MQ=255)
                                                                                                                                     aGCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGt                                                                                                                                        >  2:1621451/1‑289 (MQ=255)
                                                                                                                                      gCAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                                                       >  2:1241971/1‑289 (MQ=255)
                                                                                                                                       cAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGa                                                                                                                                                 >  1:1326147/1‑278 (MQ=255)
                                                                                                                                       cAAATAAATAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGa                                                                                                                                                 <  2:1326147/278‑1 (MQ=255)
                                                                                                                                        aaataaatAATCCATCCCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAGAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                                                       <  2:2045475/287‑1 (MQ=255)
                                                                                                                                                 atccatccCTGACTTTGGAATATGGCAATCGGCACATTCCGAACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAAc                                                                                                                                                                                                       <  2:915173/214‑1 (MQ=255)
                                                                                                                                                  tccatccCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCt                                                                                                                                                                                     <  1:1112443/231‑1 (MQ=255)
                                                                                                                                                  tccatccCTGACTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCt                                                                                                                                                                                     >  2:1112443/1‑231 (MQ=255)
                                                                                                                                                     atccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                                                        <  1:587278/281‑1 (MQ=255)
                                                                                                                                                      tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAATCCAATGCGTTTTTTCCCTCGCATAGa                                                                                                                                                                             <  1:1680496/228‑1 (MQ=255)
                                                                                                                                                      tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTcc                                                                                                                                                                                       <  1:2114414/218‑1 (MQ=255)
                                                                                                                                                      tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                                          >  2:2091238/8‑286 (MQ=255)
                                                                                                                                                      tccctgactTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATACTTGTATAATTAAATACAAAAc                                                                                                                       >  2:784381/8‑289 (MQ=255)
                                                                                                                                                                tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                                                        <  1:1841103/278‑1 (MQ=255)
                                                                                                                                                                tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACaa                                                                                                                        >  2:1841103/1‑278 (MQ=255)
                                                                                                                                                                tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAAcc                                                                                                              >  2:203123/1‑288 (MQ=255)
                                                                                                                                                                tGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCg                                                                                                             <  1:576329/289‑1 (MQ=255)
                                                                                                                                                                 ggAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                                            <  2:1799203/289‑1 (MQ=255)
                                                                                                                                                                      atGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCa                                                                                                       <  2:278931/289‑1 (MQ=255)
                                                                                                                                                                        ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                                                <  1:1149002/182‑1 (MQ=255)
                                                                                                                                                                        ggCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCaaa                                                                                                                                                                                                                >  2:1149002/1‑182 (MQ=255)
                                                                                                                                                                           aattggaccaTTCCTAACGTATCCCTTTCTGGTTCGAAAAGTGGGCAGGTACCTGATATTCCTCAAGATGTTTACTCATCGAGAGGCAGGAAATGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTTCTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  2:2018855/281‑1 (MQ=255)
                                                                                                                                                                           aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  1:863518/289‑1 (MQ=255)
                                                                                                                                                                           aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  1:2170452/289‑1 (MQ=255)
                                                                                                                                                                           aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  2:690622/289‑1 (MQ=255)
                                                                                                                                                                           aaTCGGCACATTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACACTTCCCTGATATTCCTCACAAGGTTTACGCCGCGAGTGGCAGGAAAGGCAAAATTCTGTCTCCGACGTTTTATGTCCACCTTTTTGCGCCCACAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCG‑TTTTTCCCTCGCATCTATTCCTCTAATTAAATTACTGGACACCTAAATCATTGTATAATTCCCTCTCCCCCCCATTAACCGCTTGCATAAtt                                                                                                  <  1:1045574/288‑1 (MQ=255)
                                                                                                                                                                                 cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                                          <  1:2019052/259‑1 (MQ=255)
                                                                                                                                                                                 cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                                             <  2:378390/288‑1 (MQ=255)
                                                                                                                                                                                 cacaTTCCGCACGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGca                                                                                             <  2:638823/288‑1 (MQ=255)
                                                                                                                                                                                     taccGCCCGTATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTAATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                                                        <  2:2136883/287‑1 (MQ=255)
                                                                                                                                                                                              tATCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGaa                                                                               >  1:76802/1‑289 (MQ=255)
                                                                                                                                                                                               aTCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTaa                                                                                                                                >  2:1960119/1‑239 (MQ=255)
                                                                                                                                                                                               aTCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTaa                                                                                                                                <  1:1960119/239‑1 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                                              >  1:1817256/1‑224 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAAt                                                                                                                                              <  2:1817256/224‑1 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGta                                                                                                                                       >  1:1524054/1‑231 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATAc                                                                                                                          >  1:1090231/1‑244 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  >  1:206483/1‑268 (MQ=255)
                                                                                                                                                                                                tCCCTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  2:206483/268‑1 (MQ=255)
                                                                                                                                                                                                   cTTTCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAAt                                                                          <  2:76802/289‑1 (MQ=255)
                                                                                                                                                                                                     ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                                            >  2:1759647/1‑253 (MQ=255)
                                                                                                                                                                                                     ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGc                                                                                                            <  1:1759647/253‑1 (MQ=255)
                                                                                                                                                                                                     ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  >  2:1551637/1‑263 (MQ=255)
                                                                                                                                                                                                     ttCTGGTTCGAAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  <  1:1551637/263‑1 (MQ=255)
                                                                                                                                                                                                       ctggttcgaaaaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGAt                                                                      >  1:1339429/10‑289 (MQ=255)
                                                                                                                                                                                                        tggttcgaaaaGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATa                                                                     <  2:1701643/281‑1 (MQ=255)
                                                                                                                                                                                                                aaaGTGGATAGTTCCCTGCTATTTCTCAAATGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATTCGACGTTTTATGTAAGACTTCTTGCGCCAGCAATAACCCGCCGCCACCAACCACATCCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACCCTGCCTGAAACAATCGATAAAGAata                                                              <  2:217476/288‑1 (MQ=255)
                                                                                                                                                                                                                aaaGTGGACAATTGCCTGATGTTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                                              <  2:835804/288‑1 (MQ=255)
                                                                                                                                                                                                                           ttCCCTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCacaaca                                                                                        <  2:171103/251‑1 (MQ=255)
                                                                                                                                                                                                                             cccTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCg                                                                        <  2:1662738/265‑1 (MQ=255)
                                                                                                                                                                                                                             cccTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCg                                                                        >  1:1662738/1‑265 (MQ=255)
                                                                                                                                                                                                                             cccTGATATTCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAAt                                                >  1:1461655/1‑289 (MQ=255)
                                                                                                                                                                                                                                     ttCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAAtt                                                                                                                                  <  2:1956678/199‑1 (MQ=255)
                                                                                                                                                                                                                                     ttCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAt                                        >  1:898266/1‑289 (MQ=255)
                                                                                                                                                                                                                                     ttCCTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCAt                                        >  1:1781496/1‑289 (MQ=255)
                                                                                                                                                                                                                                       ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAAc                                                                             <  2:1893367/250‑1 (MQ=255)
                                                                                                                                                                                                                                       ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAAc                                                                             >  1:1893367/1‑250 (MQ=255)
                                                                                                                                                                                                                                       ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATa                                                                     <  1:1858474/258‑1 (MQ=255)
                                                                                                                                                                                                                                       ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                                              <  1:510571/265‑1 (MQ=255)
                                                                                                                                                                                                                                       ccTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAata                                                              >  2:510571/1‑265 (MQ=255)
                                                                                                                                                                                                                                        cTCAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATaa                                                                    >  2:1434090/1‑258 (MQ=255)
                                                                                                                                                                                                                                          cAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATaa                                                                                                    <  1:241684/224‑1 (MQ=255)
                                                                                                                                                                                                                                          cAAAAGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATaa                                                                                                    >  2:241684/1‑224 (MQ=255)
                                                                                                                                                                                                                                              aGGTTTACTCATCGAGTGGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTa                               <  1:926213/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           gagtgGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAg                  <  1:784381/287‑1 (MQ=255)
                                                                                                                                                                                                                                                              tgGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                                                 <  1:1502446/143‑1 (MQ=255)
                                                                                                                                                                                                                                                              tgGCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTaatta                                                                                                                                                                 >  2:1502446/1‑143 (MQ=255)
                                                                                                                                                                                                                                                                gCAGGAAAGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAAtt                                                                                                  >  1:179858/1‑204 (MQ=255)
                                                                                                                                                                                                                                                                     aaaGGCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTAtt          <  1:606630/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ggCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCa                                                                                                                                            >  1:981271/1‑154 (MQ=255)
                                                                                                                                                                                                                                                                        ggCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCa                                                                                                                                            <  2:981271/154‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gCAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTa                               <  1:137376/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cAAAATGCTGTATCCGACGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAata   >  1:2185782/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                 
TTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTATTTTGCCGCTAACAAATTCATGATAAATATCTTTAGATGCCTTTAATTTAGCAAATAAATAATCCATCCCACTCTTTGGAATATGGCAATCGGCACATTCCGCACGTATCCCTTTCTGGTTGCTAAAGTGGACAGTTCCCTGATATTCCTCAAAAGGTTTACTCATGCTGTGGCAGGAAAGGCAAAATGCTGTATCGCTCGTTTTATGTAAGACTTTTTGCGCCAGCAATAACCCGCCGCCACCAACCACAACCGCTATCAGCAAAAACAATAACCCAATGCGTTTTTTCCCTCGCATAGATTCCTCTAATTAAATTACTGGACACCGAAATCATTGTATAATTAAATATACAACGAATTAACCGCTTGCATAATTAGGCACAACACTGCCTGAAACAATCGATAAAGAATATGATTTATTACAATGTAATCATTAATTGCTAAGGAATAACCCAGTTGCTATTTAGAATAT  >  CP042583/1638499‑1639054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A